RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	SNO3	P43544	222 aa		3.15	□□□□□ -1.9
APL4	YPR029C	ARP3	P47117	449 aa	Known RBP	3.15	□□□□□ -1.9
APL4	YPR029C	TDA4	P47153	279 aa		3.15	□□□□□ -1.9
APL4	YPR029C	YGR015C	P53208	328 aa		3.15	□□□□□ -1.9
APL4	YPR029C	SNO2	P53823	222 aa		3.15	□□□□□ -1.9
APL4	YPR029C	AAH1	P53909	347 aa		3.15	□□□□□ -1.9
APL4	YPR029C	NUP100	Q02629	959 aa		3.15	□□□□□ -1.9
APL4	YPR029C	YPL034W	Q03083	165 aa		3.15	□□□□□ -1.9
APL4	YPR029C	UPS1	Q05776	175 aa		3.15	□□□□□ -1.9
APL4	YPR029C	YLR042C	Q07990	161 aa		3.15	□□□□□ -1.9
APL4	YPR029C	MSA1	Q08471	629 aa		3.15	□□□□□ -1.9
APL4	YPR029C	YGL194C-A	Q2V2P6	80 aa		3.15	□□□□□ -1.9
APL4	YPR029C	PDR5	P33302	1511 aa	Known RBP	3.15	□□□□□ -1.91
APL4	YPR029C	SPT14	P32363	452 aa		3.15	□□□□□ -1.91
APL4	YPR029C	CAT5	P41735	233 aa		3.15	□□□□□ -1.91
APL4	YPR029C	FIP1	P45976	327 aa		3.15	□□□□□ -1.91
APL4	YPR029C	YGL082W	P53155	381 aa		3.15	□□□□□ -1.91
APL4	YPR029C	YMR181C	Q03231	154 aa		3.15	□□□□□ -1.91
APL4	YPR029C	YPR063C	Q12160	140 aa		3.15	□□□□□ -1.91
APL4	YPR029C	AGA1	P32323	725 aa		3.14	□□□□□ -1.91
APL4	YPR029C	OMA1	P36163	345 aa		3.14	□□□□□ -1.91
APL4	YPR029C	CSH1	P38287	376 aa		3.14	□□□□□ -1.91
APL4	YPR029C	YER181C	P40097	107 aa		3.14	□□□□□ -1.91
APL4	YPR029C	PRM5	P40476	318 aa		3.14	□□□□□ -1.91
APL4	YPR029C	DOC1	P53068	250 aa		3.14	□□□□□ -1.91
APL4	YPR029C	TPC1	P53257	314 aa		3.14	□□□□□ -1.91
APL4	YPR029C	MCP1	Q12106	302 aa		3.14	□□□□□ -1.91
APL4	YPR029C	HTL1	Q9URQ5	78 aa		3.14	□□□□□ -1.91
APL4	YPR029C	CPR1	P14832	162 aa	Known RBP	3.14	□□□□□ -1.91
APL4	YPR029C	UBC5	P15732	148 aa		3.14	□□□□□ -1.91
APL4	YPR029C	URA10	P30402	227 aa		3.14	□□□□□ -1.91
APL4	YPR029C	YKR070W	P36151	352 aa	Known RBP	3.14	□□□□□ -1.91
APL4	YPR029C	TRS20	P38334	175 aa		3.14	□□□□□ -1.91
APL4	YPR029C	TIM17	P39515	158 aa		3.14	□□□□□ -1.91
APL4	YPR029C	HYR1	P40581	163 aa	Known RBP	3.14	□□□□□ -1.91
APL4	YPR029C	GNA1	P43577	159 aa	Predicted RBP	3.14	□□□□□ -1.91
APL4	YPR029C	GRH1	Q04410	372 aa	Known RBP	3.14	□□□□□ -1.91
APL4	YPR029C	YOR292C	Q08743	309 aa		3.14	□□□□□ -1.91
APL4	YPR029C	GEA2	P39993	1459 aa	Known RBP	3.13	□□□□□ -1.91
APL4	YPR029C	ROM2	P51862	1356 aa	Known RBP	3.13	□□□□□ -1.91
APL4	YPR029C	RAD10	P06838	210 aa		3.13	□□□□□ -1.91
APL4	YPR029C	ATP5	P09457	212 aa		3.13	□□□□□ -1.91
APL4	YPR029C	YFL068W	P0CX99	160 aa		3.13	□□□□□ -1.91
APL4	YPR029C	YLL066W-A	P0CY00	160 aa		3.13	□□□□□ -1.91
APL4	YPR029C	YLL067W-A	P0CY01	160 aa		3.13	□□□□□ -1.91
APL4	YPR029C	URE2	P23202	354 aa	Known RBP	3.13	□□□□□ -1.91
APL4	YPR029C	GLC7	P32598	312 aa	Known RBP	3.13	□□□□□ -1.91
APL4	YPR029C	GPX1	P36014	167 aa		3.13	□□□□□ -1.91
APL4	YPR029C	YHR130C	P38834	111 aa		3.13	□□□□□ -1.91
APL4	YPR029C	AVT2	P39981	480 aa		3.13	□□□□□ -1.91
APL4	YPR029C	UIP4	Q08926	304 aa		3.13	□□□□□ -1.91
APL4	YPR029C	LAS17	Q12446	633 aa		3.13	□□□□□ -1.91
APL4	YPR029C	LTE1	P07866	1435 aa		3.13	□□□□□ -1.91
APL4	YPR029C	LYS2	P07702	1392 aa		3.13	□□□□□ -1.91
APL4	YPR029C	ADE6	P38972	1358 aa	Known RBP	3.13	□□□□□ -1.91
APL4	YPR029C	RAD6	P06104	172 aa		3.13	□□□□□ -1.91
APL4	YPR029C	ARO2	P28777	376 aa	Known RBP	3.13	□□□□□ -1.91
APL4	YPR029C	CSE2	P33308	149 aa		3.13	□□□□□ -1.91
APL4	YPR029C	ERV15	P38312	142 aa		3.13	□□□□□ -1.91
APL4	YPR029C	GGC1	P38988	300 aa		3.13	□□□□□ -1.91
APL4	YPR029C	AVT7	P40501	490 aa		3.13	□□□□□ -1.91
APL4	YPR029C	SNM1	P40993	198 aa		3.13	□□□□□ -1.91
APL4	YPR029C	FMP41	P53889	259 aa	Known RBP	3.13	□□□□□ -1.91
APL4	YPR029C	SCW10	Q04951	389 aa		3.13	□□□□□ -1.91
APL4	YPR029C	SNX3	Q08826	162 aa	Known RBP	3.13	□□□□□ -1.91
APL4	YPR029C	IZH2	Q12442	317 aa		3.13	□□□□□ -1.91
APL4	YPR029C	YBL008W-A	Q3E821	79 aa		3.13	□□□□□ -1.91
APL4	YPR029C	RPL15A	P05748	204 aa	Known RBP	3.12	□□□□□ -1.91
APL4	YPR029C	RPS18A	P0CX55	146 aa	Known RBP	3.12	□□□□□ -1.91
APL4	YPR029C	RPS18B	P0CX56	146 aa	Predicted RBP	3.12	□□□□□ -1.91
APL4	YPR029C	MRPL44	P19956	98 aa		3.12	□□□□□ -1.91
APL4	YPR029C	RPL14A	P36105	138 aa	Known RBP	3.12	□□□□□ -1.91
APL4	YPR029C	YMC2	P38087	329 aa		3.12	□□□□□ -1.91
APL4	YPR029C	RPL14B	P38754	138 aa	Known RBP	3.12	□□□□□ -1.91
APL4	YPR029C	EDC2	P40023	145 aa	Predicted RBP	3.12	□□□□□ -1.91
APL4	YPR029C	RPL15B	P54780	204 aa	Predicted RBP	3.12	□□□□□ -1.91
APL4	YPR029C	BUD25	P85052	153 aa		3.12	□□□□□ -1.91
APL4	YPR029C	TDA8	Q6B2U8	126 aa		3.12	□□□□□ -1.91
APL4	YPR029C	HIR3	P47171	1648 aa		3.12	□□□□□ -1.91
APL4	YPR029C	BGL2	P15703	313 aa	Known RBP	3.12	□□□□□ -1.91
APL4	YPR029C	SCM4	P32564	187 aa		3.12	□□□□□ -1.91
APL4	YPR029C	MIT1	P40002	666 aa		3.12	□□□□□ -1.91
APL4	YPR029C	SKI6	P46948	246 aa	Predicted RBP	3.12	□□□□□ -1.91
APL4	YPR029C	YNR014W	P53719	212 aa		3.12	□□□□□ -1.91
APL4	YPR029C	COA4	Q05809	96 aa		3.12	□□□□□ -1.91
APL4	YPR029C	TIR4	Q12218	487 aa	Predicted RBP	3.12	□□□□□ -1.91
APL4	YPR029C	YHR139C-A	O13536	103 aa		3.11	□□□□□ -1.91
APL4	YPR029C	MRS3	P10566	314 aa		3.11	□□□□□ -1.91
APL4	YPR029C	RCN1	P36054	211 aa		3.11	□□□□□ -1.91
APL4	YPR029C	YBL081W	P38180	368 aa	Known RBP	3.11	□□□□□ -1.91
APL4	YPR029C	NSG1	P38837	291 aa		3.11	□□□□□ -1.91
APL4	YPR029C	GAA1	P39012	614 aa		3.11	□□□□□ -1.91
APL4	YPR029C	SPC25	P40014	221 aa		3.11	□□□□□ -1.91
APL4	YPR029C	VPS25	P47142	202 aa		3.11	□□□□□ -1.91
APL4	YPR029C	YGL193C	P53097	103 aa		3.11	□□□□□ -1.91
APL4	YPR029C	VPS15	P22219	1454 aa		3.11	□□□□□ -1.91
APL4	YPR029C	PDR11	P40550	1411 aa		3.11	□□□□□ -1.91
APL4	YPR029C	SGA1	P08019	549 aa		3.11	□□□□□ -1.91
APL4	YPR029C	AHT1	P29589	182 aa		3.11	□□□□□ -1.91
APL4	YPR029C	SDH4	P37298	181 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 76 ms