RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSC1	YOR142W	ILV5	P06168	395 aa	Known RBP	5.27	□□□□□ -1.57
LSC1	YOR142W	STF2	P16965	84 aa		5.27	□□□□□ -1.57
LSC1	YOR142W	SUA5	P32579	426 aa		5.27	□□□□□ -1.57
LSC1	YOR142W	ERV15	P38312	142 aa		5.27	□□□□□ -1.57
LSC1	YOR142W	MRPL13	Q02204	264 aa		5.27	□□□□□ -1.57
LSC1	YOR142W	HOR7	Q05827	59 aa		5.27	□□□□□ -1.57
LSC1	YOR142W	PBP4	Q07362	185 aa	Known RBP	5.27	□□□□□ -1.57
LSC1	YOR142W	PRM4	Q12498	284 aa		5.27	□□□□□ -1.57
LSC1	YOR142W	HBN1	Q96VH4	193 aa		5.27	□□□□□ -1.57
LSC1	YOR142W	SOD1	P00445	154 aa	Known RBP	5.26	□□□□□ -1.57
LSC1	YOR142W	ARG80	P07249	177 aa		5.26	□□□□□ -1.57
LSC1	YOR142W	YPS1	P32329	569 aa		5.26	□□□□□ -1.57
LSC1	YOR142W	LSM12	P38828	187 aa	Known RBP	5.26	□□□□□ -1.57
LSC1	YOR142W	RPA43	P46669	326 aa		5.26	□□□□□ -1.57
LSC1	YOR142W	YGR050C	P53231	118 aa		5.26	□□□□□ -1.57
LSC1	YOR142W	PAM18	Q07914	168 aa		5.26	□□□□□ -1.57
LSC1	YOR142W	IRC23	Q08416	157 aa		5.26	□□□□□ -1.57
LSC1	YOR142W	MRPL23	Q12487	163 aa	Predicted RBP	5.26	□□□□□ -1.57
LSC1	YOR142W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.26	□□□□□ -1.57
LSC1	YOR142W	MDN1	Q12019	4910 aa	Known RBP	5.26	□□□□□ -1.57
LSC1	YOR142W	MLF3	P32047	452 aa		5.25	□□□□□ -1.57
LSC1	YOR142W	GEP4	P38812	185 aa		5.25	□□□□□ -1.57
LSC1	YOR142W	RFC2	P40348	353 aa		5.25	□□□□□ -1.57
LSC1	YOR142W	YIR035C	P40579	254 aa		5.25	□□□□□ -1.57
LSC1	YOR142W	LST8	P41318	303 aa		5.25	□□□□□ -1.57
LSC1	YOR142W	MSO1	P53604	210 aa	Known RBP	5.25	□□□□□ -1.57
LSC1	YOR142W	DYN2	Q02647	92 aa		5.25	□□□□□ -1.57
LSC1	YOR142W	GRX2	P17695	143 aa	Known RBP	5.24	□□□□□ -1.57
LSC1	YOR142W	TIP1	P27654	210 aa	Predicted RBP	5.24	□□□□□ -1.57
LSC1	YOR142W	RPD3	P32561	433 aa		5.24	□□□□□ -1.57
LSC1	YOR142W	PPQ1	P32945	549 aa		5.24	□□□□□ -1.57
LSC1	YOR142W	MRPL38	P35996	138 aa	Predicted RBP	5.24	□□□□□ -1.57
LSC1	YOR142W	YPC1	P38298	316 aa		5.24	□□□□□ -1.57
LSC1	YOR142W	YPT31	P38555	223 aa	Known RBP	5.24	□□□□□ -1.57
LSC1	YOR142W	EST3	Q03096	181 aa		5.24	□□□□□ -1.57
LSC1	YOR142W	YMR181C	Q03231	154 aa		5.24	□□□□□ -1.57
LSC1	YOR142W	VPS71	Q03433	280 aa		5.24	□□□□□ -1.57
LSC1	YOR142W	RRT7	Q07829	113 aa		5.24	□□□□□ -1.57
LSC1	YOR142W	RKI1	Q12189	258 aa		5.24	□□□□□ -1.57
LSC1	YOR142W	YGL258W-A	Q3E740	77 aa		5.24	□□□□□ -1.57
LSC1	YOR142W	URA5	P13298	226 aa	Known RBP	5.23	□□□□□ -1.57
LSC1	YOR142W	ERV1	P27882	189 aa		5.23	□□□□□ -1.57
LSC1	YOR142W	YKL162C	P36052	402 aa		5.23	□□□□□ -1.57
LSC1	YOR142W	YBR184W	P38299	523 aa		5.23	□□□□□ -1.57
LSC1	YOR142W	COX15	P40086	486 aa		5.23	□□□□□ -1.57
LSC1	YOR142W	YIF1	P53845	314 aa	Known RBP	5.23	□□□□□ -1.57
LSC1	YOR142W	YLR224W	Q05947	369 aa		5.23	□□□□□ -1.57
LSC1	YOR142W	ATG31	Q12421	196 aa		5.23	□□□□□ -1.57
LSC1	YOR142W	COA2	Q3E823	68 aa		5.23	□□□□□ -1.57
LSC1	YOR142W	CKS1	P20486	150 aa	Known RBP	5.22	□□□□□ -1.57
LSC1	YOR142W	PDC2	P32896	925 aa		5.22	□□□□□ -1.57
LSC1	YOR142W	YAR068W	P39564	161 aa		5.22	□□□□□ -1.57
LSC1	YOR142W	BOL3	P39724	118 aa		5.22	□□□□□ -1.57
LSC1	YOR142W	TOS8	P53147	276 aa		5.22	□□□□□ -1.57
LSC1	YOR142W	HCH1	P53834	153 aa		5.22	□□□□□ -1.57
LSC1	YOR142W	YNG1	Q08465	219 aa		5.22	□□□□□ -1.57
LSC1	YOR142W	YHR212W-A	P0CX91	67 aa		5.21	□□□□□ -1.58
LSC1	YOR142W	MRS3	P10566	314 aa		5.21	□□□□□ -1.58
LSC1	YOR142W	SEC22	P22214	214 aa		5.21	□□□□□ -1.58
LSC1	YOR142W	MIG1	P27705	504 aa		5.21	□□□□□ -1.58
LSC1	YOR142W	YKL075C	P36083	450 aa		5.21	□□□□□ -1.58
LSC1	YOR142W	SYG1	P40528	902 aa		5.21	□□□□□ -1.58
LSC1	YOR142W	YGR219W	P53307	113 aa		5.21	□□□□□ -1.58
LSC1	YOR142W	SSU72	P53538	206 aa	Predicted RBP	5.21	□□□□□ -1.58
LSC1	YOR142W	YHP1	Q04116	353 aa		5.21	□□□□□ -1.58
LSC1	YOR142W	FRQ1	Q06389	190 aa		5.21	□□□□□ -1.58
LSC1	YOR142W	YPL264C	Q08980	353 aa		5.21	□□□□□ -1.58
LSC1	YOR142W	USV1	Q12132	391 aa		5.21	□□□□□ -1.58
LSC1	YOR142W	POC4	Q12245	148 aa	Predicted RBP	5.21	□□□□□ -1.58
LSC1	YOR142W	SCM3	Q12334	223 aa		5.21	□□□□□ -1.58
LSC1	YOR142W	AIM45	Q12480	344 aa	Known RBP	5.21	□□□□□ -1.58
LSC1	YOR142W	RRF1	P38771	230 aa		5.2	□□□□□ -1.58
LSC1	YOR142W	WSS1	P38838	269 aa		5.2	□□□□□ -1.58
LSC1	YOR142W	NSA2	P40078	261 aa	Known RBP	5.2	□□□□□ -1.58
LSC1	YOR142W	YJR111C	P47148	283 aa	Known RBP	5.2	□□□□□ -1.58
LSC1	YOR142W	GPI15	P53961	229 aa		5.2	□□□□□ -1.58
LSC1	YOR142W	RAD28	Q12021	506 aa		5.2	□□□□□ -1.58
LSC1	YOR142W	TRP4	P07285	380 aa	Predicted RBP	5.19	□□□□□ -1.58
LSC1	YOR142W	PET494	P07390	489 aa	Predicted RBP	5.19	□□□□□ -1.58
LSC1	YOR142W	FCY2	P17064	533 aa		5.19	□□□□□ -1.58
LSC1	YOR142W	SAR1	P20606	190 aa	Known RBP	5.19	□□□□□ -1.58
LSC1	YOR142W	MSN1	P22148	382 aa		5.19	□□□□□ -1.58
LSC1	YOR142W	ACB1	P31787	87 aa		5.19	□□□□□ -1.58
LSC1	YOR142W	YEA6	P39953	335 aa		5.19	□□□□□ -1.58
LSC1	YOR142W	ERG25	P53045	309 aa		5.19	□□□□□ -1.58
LSC1	YOR142W	YMR090W	Q04304	227 aa	Known RBP	5.19	□□□□□ -1.58
LSC1	YOR142W	PRM3	Q08931	133 aa		5.19	□□□□□ -1.58
LSC1	YOR142W	YPS3	Q12303	508 aa		5.19	□□□□□ -1.58
LSC1	YOR142W	YLR146W-A	Q2V2P1	62 aa		5.19	□□□□□ -1.58
LSC1	YOR142W	YCR025C	P25352	136 aa		5.18	□□□□□ -1.58
LSC1	YOR142W	IMD2	P38697	523 aa	Known RBP	5.18	□□□□□ -1.58
LSC1	YOR142W	RPL13B	P40212	199 aa	Known RBP	5.18	□□□□□ -1.58
LSC1	YOR142W	PKP2	P53170	491 aa		5.18	□□□□□ -1.58
LSC1	YOR142W	CPD1	P53314	239 aa		5.18	□□□□□ -1.58
LSC1	YOR142W	CAB4	P53332	305 aa		5.18	□□□□□ -1.58
LSC1	YOR142W	SWT21	P53873	357 aa	Predicted RBP	5.18	□□□□□ -1.58
LSC1	YOR142W	ACT1	P60010	375 aa	Known RBP	5.18	□□□□□ -1.58
LSC1	YOR142W	ERP1	Q05359	219 aa	Known RBP	5.18	□□□□□ -1.58
LSC1	YOR142W	DCS1	Q06151	350 aa		5.18	□□□□□ -1.58
LSC1	YOR142W	RXT3	Q07458	294 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms