RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C COA6Q3E846 104 aa6.38□□□□□ -1.39
RUP1YOR138C URA5P13298 226 aaKnown RBP6.38□□□□□ -1.39
RUP1YOR138C FCY2P17064 533 aa6.38□□□□□ -1.39
RUP1YOR138C NUD1P32336 851 aa6.38□□□□□ -1.39
RUP1YOR138C YUH1P35127 236 aa6.38□□□□□ -1.39
RUP1YOR138C QDR3P38227 689 aa6.38□□□□□ -1.39
RUP1YOR138C CCS1P40202 249 aaKnown RBP6.38□□□□□ -1.39
RUP1YOR138C XPT1P47165 209 aa6.38□□□□□ -1.39
RUP1YOR138C OST3P48439 350 aa6.38□□□□□ -1.39
RUP1YOR138C PCP1P53259 346 aa6.38□□□□□ -1.39
RUP1YOR138C YNR040WP53736 256 aa6.38□□□□□ -1.39
RUP1YOR138C RIM9Q04734 239 aa6.38□□□□□ -1.39
RUP1YOR138C DFG5Q05031 458 aa6.38□□□□□ -1.39
RUP1YOR138C USV1Q12132 391 aa6.38□□□□□ -1.39
RUP1YOR138C COX1P00401 534 aa6.37□□□□□ -1.39
RUP1YOR138C YGL010WP25338 174 aa6.37□□□□□ -1.39
RUP1YOR138C RIB4P50861 169 aaPredicted RBP6.37□□□□□ -1.39
RUP1YOR138C LST7P53237 242 aa6.37□□□□□ -1.39
RUP1YOR138C ELA1P53861 379 aaPredicted RBP6.37□□□□□ -1.39
RUP1YOR138C NAT3Q06504 195 aa6.37□□□□□ -1.39
RUP1YOR138C ARR3Q06598 404 aa6.37□□□□□ -1.39
RUP1YOR138C YOP1Q12402 180 aa6.37□□□□□ -1.39
RUP1YOR138C MPD1Q12404 318 aaKnown RBP6.37□□□□□ -1.39
RUP1YOR138C ACC1Q00955 2233 aaKnown RBP6.37□□□□□ -1.39
RUP1YOR138C YDR157WA0A023PZE8 133 aa6.37□□□□□ -1.39
RUP1YOR138C PRE9P23638 258 aaKnown RBP6.37□□□□□ -1.39
RUP1YOR138C IMP1P28627 190 aa6.37□□□□□ -1.39
RUP1YOR138C DAD2P36162 133 aa6.37□□□□□ -1.39
RUP1YOR138C NTC20P38302 140 aaPredicted RBP6.37□□□□□ -1.39
RUP1YOR138C AIM24P47127 394 aa6.37□□□□□ -1.39
RUP1YOR138C APS2Q00381 147 aa6.37□□□□□ -1.39
RUP1YOR138C YMR007WQ03675 126 aa6.37□□□□□ -1.39
RUP1YOR138C YMR254CQ04838 102 aa6.37□□□□□ -1.39
RUP1YOR138C YML053CQ04978 212 aa6.37□□□□□ -1.39
RUP1YOR138C YOR292CQ08743 309 aa6.37□□□□□ -1.39
RUP1YOR138C RPS25BP0C0T4 108 aaKnown RBP6.36□□□□□ -1.39
RUP1YOR138C QCR9P22289 66 aa6.36□□□□□ -1.39
RUP1YOR138C YKL107WP34251 309 aa6.36□□□□□ -1.39
RUP1YOR138C YGR269WP40326 108 aa6.36□□□□□ -1.39
RUP1YOR138C YIL029CP40538 142 aa6.36□□□□□ -1.39
RUP1YOR138C COQ11Q05892 277 aa6.36□□□□□ -1.39
RUP1YOR138C GRE1Q08969 168 aa6.36□□□□□ -1.39
RUP1YOR138C ATX2Q12067 313 aa6.36□□□□□ -1.39
RUP1YOR138C RPS25AQ3E792 108 aaPredicted RBP6.36□□□□□ -1.39
RUP1YOR138C GLT1Q12680 2145 aaKnown RBP6.35□□□□□ -1.39
RUP1YOR138C FMP49A0A023PZB3 126 aa6.35□□□□□ -1.39
RUP1YOR138C ERG8P24521 451 aa6.35□□□□□ -1.39
RUP1YOR138C LOC1P43586 204 aaPredicted RBP6.35□□□□□ -1.39
RUP1YOR138C YGR050CP53231 118 aa6.35□□□□□ -1.39
RUP1YOR138C WSC2P53832 503 aa6.35□□□□□ -1.39
RUP1YOR138C PIN3Q06449 215 aa6.35□□□□□ -1.39
RUP1YOR138C YDL129WQ07555 291 aa6.35□□□□□ -1.39
RUP1YOR138C YKL075CP36083 450 aa6.35□□□□□ -1.39
RUP1YOR138C UBS1P38290 277 aa6.35□□□□□ -1.39
RUP1YOR138C YEL057CP39983 233 aa6.35□□□□□ -1.39
RUP1YOR138C RCE1Q03530 315 aa6.35□□□□□ -1.39
RUP1YOR138C AKR2Q12013 749 aa6.35□□□□□ -1.39
RUP1YOR138C FLO9P39712 1322 aa6.34□□□□□ -1.39
RUP1YOR138C YBL059WP34224 193 aa6.34□□□□□ -1.39
RUP1YOR138C YMR262WP38430 313 aa6.34□□□□□ -1.39
RUP1YOR138C ECO1P43605 281 aa6.34□□□□□ -1.39
RUP1YOR138C NUP53Q03790 475 aa6.34□□□□□ -1.39
RUP1YOR138C STP4Q07351 490 aa6.34□□□□□ -1.39
RUP1YOR138C FYV7Q12247 151 aa6.34□□□□□ -1.39
RUP1YOR138C STE4P18851 423 aa6.33□□□□□ -1.4
RUP1YOR138C OST1P41543 476 aaKnown RBP6.33□□□□□ -1.4
RUP1YOR138C PRY1P47032 299 aa6.33□□□□□ -1.4
RUP1YOR138C YIP5P53108 310 aa6.33□□□□□ -1.4
RUP1YOR138C YDC1Q02896 317 aa6.33□□□□□ -1.4
RUP1YOR138C YAP6Q03935 383 aa6.33□□□□□ -1.4
RUP1YOR138C ECM18Q04623 453 aa6.33□□□□□ -1.4
RUP1YOR138C TMA10Q06177 86 aa6.33□□□□□ -1.4
RUP1YOR138C FIT3Q08907 204 aa6.33□□□□□ -1.4
RUP1YOR138C TRP4P07285 380 aaPredicted RBP6.33□□□□□ -1.4
RUP1YOR138C DAL3P32459 195 aa6.33□□□□□ -1.4
RUP1YOR138C PIC2P40035 300 aa6.33□□□□□ -1.4
RUP1YOR138C PRP11Q07350 266 aaPredicted RBP6.33□□□□□ -1.4
RUP1YOR138C LDS2Q08218 356 aa6.33□□□□□ -1.4
RUP1YOR138C POC4Q12245 148 aaPredicted RBP6.33□□□□□ -1.4
RUP1YOR138C POR1P04840 283 aaKnown RBP6.32□□□□□ -1.4
RUP1YOR138C AFR1P33304 620 aa6.32□□□□□ -1.4
RUP1YOR138C DER1P38307 211 aa6.32□□□□□ -1.4
RUP1YOR138C CUE1P38428 203 aa6.32□□□□□ -1.4
RUP1YOR138C LOA1Q06508 300 aa6.32□□□□□ -1.4
RUP1YOR138C RAF1Q06891 181 aa6.32□□□□□ -1.4
RUP1YOR138C YDL180WQ12301 547 aa6.32□□□□□ -1.4
RUP1YOR138C YPR014CQ6B0W2 109 aa6.32□□□□□ -1.4
RUP1YOR138C HMX1P32339 317 aa6.32□□□□□ -1.4
RUP1YOR138C MRPS5P33759 307 aa6.32□□□□□ -1.4
RUP1YOR138C COX15P40086 486 aa6.32□□□□□ -1.4
RUP1YOR138C ARP3P47117 449 aaKnown RBP6.32□□□□□ -1.4
RUP1YOR138C RPN14P53196 417 aa6.32□□□□□ -1.4
RUP1YOR138C CRH1P53301 507 aa6.32□□□□□ -1.4
RUP1YOR138C YPL077CQ02831 240 aa6.32□□□□□ -1.4
RUP1YOR138C PKR1Q03880 122 aaKnown RBP6.32□□□□□ -1.4
RUP1YOR138C UPS1Q05776 175 aa6.32□□□□□ -1.4
RUP1YOR138C RPS22AP0C0W1 130 aaKnown RBP6.31□□□□□ -1.4
RUP1YOR138C DYN2Q02647 92 aa6.31□□□□□ -1.4
RUP1YOR138C YPR098CQ06089 161 aa6.31□□□□□ -1.4
RUP1YOR138C HRD1Q08109 551 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 82.3 ms