RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	GEP4	P38812	185 aa		7.6	□□□□□ -1.19
MSB4	YOL112W	RPL13B	P40212	199 aa	Known RBP	7.6	□□□□□ -1.19
MSB4	YOL112W	LST8	P41318	303 aa		7.6	□□□□□ -1.19
MSB4	YOL112W	FIP1	P45976	327 aa		7.6	□□□□□ -1.19
MSB4	YOL112W	ACT1	P60010	375 aa	Known RBP	7.6	□□□□□ -1.19
MSB4	YOL112W	AIR2	Q12476	344 aa	Known RBP	7.6	□□□□□ -1.19
MSB4	YOL112W	RPL13A	Q12690	199 aa	Predicted RBP	7.6	□□□□□ -1.19
MSB4	YOL112W	YGL258W-A	Q3E740	77 aa		7.6	□□□□□ -1.19
MSB4	YOL112W	YER190C-B	P0CX94	160 aa		7.59	□□□□□ -1.19
MSB4	YOL112W	YEL077W-A	P0CX95	160 aa		7.59	□□□□□ -1.19
MSB4	YOL112W	YGR296C-B	P0CX96	160 aa		7.59	□□□□□ -1.19
MSB4	YOL112W	YPL283W-B	P0CX97	160 aa		7.59	□□□□□ -1.19
MSB4	YOL112W	YPR204C-A	P0CX98	160 aa		7.59	□□□□□ -1.19
MSB4	YOL112W	YFL068W	P0CX99	160 aa		7.59	□□□□□ -1.19
MSB4	YOL112W	YLL066W-A	P0CY00	160 aa		7.59	□□□□□ -1.19
MSB4	YOL112W	YLL067W-A	P0CY01	160 aa		7.59	□□□□□ -1.19
MSB4	YOL112W	PRS4	P38063	326 aa	Predicted RBP	7.59	□□□□□ -1.19
MSB4	YOL112W	COX15	P40086	486 aa		7.59	□□□□□ -1.19
MSB4	YOL112W	PKP2	P53170	491 aa		7.59	□□□□□ -1.19
MSB4	YOL112W	ERP1	Q05359	219 aa	Known RBP	7.59	□□□□□ -1.19
MSB4	YOL112W	YNG1	Q08465	219 aa		7.59	□□□□□ -1.19
MSB4	YOL112W	YPL264C	Q08980	353 aa		7.59	□□□□□ -1.19
MSB4	YOL112W	YGL194C-A	Q2V2P6	80 aa		7.59	□□□□□ -1.19
MSB4	YOL112W	PRY2	P36110	329 aa		7.58	□□□□□ -1.2
MSB4	YOL112W	YPT31	P38555	223 aa	Known RBP	7.58	□□□□□ -1.2
MSB4	YOL112W	YEA6	P39953	335 aa		7.58	□□□□□ -1.2
MSB4	YOL112W	PNC1	P53184	216 aa	Known RBP	7.58	□□□□□ -1.2
MSB4	YOL112W	HCH1	P53834	153 aa		7.58	□□□□□ -1.2
MSB4	YOL112W	YMR090W	Q04304	227 aa	Known RBP	7.58	□□□□□ -1.2
MSB4	YOL112W	PBP4	Q07362	185 aa	Known RBP	7.58	□□□□□ -1.2
MSB4	YOL112W	IRC23	Q08416	157 aa		7.58	□□□□□ -1.2
MSB4	YOL112W	YPS1	P32329	569 aa		7.57	□□□□□ -1.2
MSB4	YOL112W	AGE2	P40529	298 aa		7.57	□□□□□ -1.2
MSB4	YOL112W	VPS55	P47111	140 aa		7.57	□□□□□ -1.2
MSB4	YOL112W	USV1	Q12132	391 aa		7.57	□□□□□ -1.2
MSB4	YOL112W	YLR125W	Q12138	136 aa		7.57	□□□□□ -1.2
MSB4	YOL112W	POC4	Q12245	148 aa	Predicted RBP	7.57	□□□□□ -1.2
MSB4	YOL112W	ISN1	Q99312	450 aa		7.57	□□□□□ -1.2
MSB4	YOL112W	RPD3	P32561	433 aa		7.56	□□□□□ -1.2
MSB4	YOL112W	MRPL38	P35996	138 aa	Predicted RBP	7.56	□□□□□ -1.2
MSB4	YOL112W	WSS1	P38838	269 aa		7.56	□□□□□ -1.2
MSB4	YOL112W	AGX1	P43567	385 aa		7.56	□□□□□ -1.2
MSB4	YOL112W	SSU72	P53538	206 aa	Predicted RBP	7.56	□□□□□ -1.2
MSB4	YOL112W	DID2	P69771	204 aa		7.56	□□□□□ -1.2
MSB4	YOL112W	RKI1	Q12189	258 aa		7.56	□□□□□ -1.2
MSB4	YOL112W	YGR035W-A	Q45U48	73 aa		7.56	□□□□□ -1.2
MSB4	YOL112W	MRS3	P10566	314 aa		7.55	□□□□□ -1.2
MSB4	YOL112W	STF2	P16965	84 aa		7.55	□□□□□ -1.2
MSB4	YOL112W	GLY1	P37303	387 aa	Known RBP	7.55	□□□□□ -1.2
MSB4	YOL112W	ICS2	P38284	255 aa		7.55	□□□□□ -1.2
MSB4	YOL112W	SLM6	P38343	150 aa		7.55	□□□□□ -1.2
MSB4	YOL112W	NSA2	P40078	261 aa	Known RBP	7.55	□□□□□ -1.2
MSB4	YOL112W	YMR082C	Q04276	118 aa		7.55	□□□□□ -1.2
MSB4	YOL112W	HOR7	Q05827	59 aa		7.55	□□□□□ -1.2
MSB4	YOL112W	FRQ1	Q06389	190 aa		7.55	□□□□□ -1.2
MSB4	YOL112W	TRP4	P07285	380 aa	Predicted RBP	7.55	□□□□□ -1.2
MSB4	YOL112W	FCY2	P17064	533 aa		7.55	□□□□□ -1.2
MSB4	YOL112W	TAD2	P47058	250 aa		7.55	□□□□□ -1.2
MSB4	YOL112W	PDR17	P53844	350 aa		7.55	□□□□□ -1.2
MSB4	YOL112W	DCS1	Q06151	350 aa		7.55	□□□□□ -1.2
MSB4	YOL112W	YPS3	Q12303	508 aa		7.55	□□□□□ -1.2
MSB4	YOL112W	LAS17	Q12446	633 aa		7.55	□□□□□ -1.2
MSB4	YOL112W	YCR025C	P25352	136 aa		7.54	□□□□□ -1.2
MSB4	YOL112W	YAR068W	P39564	161 aa		7.54	□□□□□ -1.2
MSB4	YOL112W	YGL117W	P53133	265 aa		7.54	□□□□□ -1.2
MSB4	YOL112W	TIM44	Q01852	431 aa		7.54	□□□□□ -1.2
MSB4	YOL112W	SRL3	P36167	246 aa		7.53	□□□□□ -1.2
MSB4	YOL112W	YMR181C	Q03231	154 aa		7.53	□□□□□ -1.2
MSB4	YOL112W	YHP1	Q04116	353 aa		7.53	□□□□□ -1.2
MSB4	YOL112W	ANT1	Q06497	328 aa		7.53	□□□□□ -1.2
MSB4	YOL112W	ILV5	P06168	395 aa	Known RBP	7.52	□□□□□ -1.21
MSB4	YOL112W	MAG1	P22134	296 aa	Known RBP	7.52	□□□□□ -1.21
MSB4	YOL112W	YKL075C	P36083	450 aa		7.52	□□□□□ -1.21
MSB4	YOL112W	HXT14	P42833	540 aa		7.52	□□□□□ -1.21
MSB4	YOL112W	RPA43	P46669	326 aa		7.52	□□□□□ -1.21
MSB4	YOL112W	ECM27	P47144	725 aa		7.52	□□□□□ -1.21
MSB4	YOL112W	RAD28	Q12021	506 aa		7.52	□□□□□ -1.21
MSB4	YOL112W	MRPL23	Q12487	163 aa	Predicted RBP	7.52	□□□□□ -1.21
MSB4	YOL112W	YHR213W-A	Q8TGT4	77 aa		7.52	□□□□□ -1.21
MSB4	YOL112W	TOS8	P53147	276 aa		7.51	□□□□□ -1.21
MSB4	YOL112W	BER1	Q06688	274 aa	Known RBP	7.51	□□□□□ -1.21
MSB4	YOL112W	PRR2	Q12310	699 aa		7.51	□□□□□ -1.21
MSB4	YOL112W	PAA1	Q12447	191 aa	Known RBP	7.51	□□□□□ -1.21
MSB4	YOL112W	RPS25B	P0C0T4	108 aa	Known RBP	7.5	□□□□□ -1.21
MSB4	YOL112W	RTC3	P38804	111 aa	Predicted RBP	7.5	□□□□□ -1.21
MSB4	YOL112W	JAC1	P53193	184 aa		7.5	□□□□□ -1.21
MSB4	YOL112W	YGR219W	P53307	113 aa		7.5	□□□□□ -1.21
MSB4	YOL112W	MRPL50	P53724	139 aa		7.5	□□□□□ -1.21
MSB4	YOL112W	AGC1	Q12482	902 aa		7.5	□□□□□ -1.21
MSB4	YOL112W	RPS25A	Q3E792	108 aa	Predicted RBP	7.5	□□□□□ -1.21
MSB4	YOL112W	PET494	P07390	489 aa	Predicted RBP	7.49	□□□□□ -1.21
MSB4	YOL112W	YBL071C	P38185	102 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	QDR3	P38227	689 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	YGR269W	P40326	108 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	PLP1	Q04004	230 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	RXT3	Q07458	294 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	YOR352W	Q08816	343 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	UPS2	P35200	230 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	DOG2	P38773	246 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	DOG1	P38774	246 aa		7.49	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms