RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W YMR144WP40214 342 aaKnown RBP1.03□□□□□ -2.24
CTK3YML112W HPM1P40481 377 aa1.03□□□□□ -2.24
CTK3YML112W GLC8P41818 229 aa1.03□□□□□ -2.24
CTK3YML112W ALB1P47019 175 aaPredicted RBP1.03□□□□□ -2.24
CTK3YML112W CCC1P47818 322 aa1.03□□□□□ -2.24
CTK3YML112W PRM8P53174 237 aa1.03□□□□□ -2.24
CTK3YML112W FYV6P53913 173 aa1.03□□□□□ -2.24
CTK3YML112W TIM8P57744 87 aa1.03□□□□□ -2.24
CTK3YML112W DYN2Q02647 92 aa1.03□□□□□ -2.24
CTK3YML112W HNT1Q04344 158 aaKnown RBP1.03□□□□□ -2.24
CTK3YML112W YET3Q07451 203 aa1.03□□□□□ -2.24
CTK3YML112W YOL024WQ08172 172 aa1.03□□□□□ -2.24
CTK3YML112W DAS2Q12084 232 aa1.03□□□□□ -2.24
CTK3YML112W RPL13AQ12690 199 aaPredicted RBP1.03□□□□□ -2.24
CTK3YML112W FLO9P39712 1322 aa1.03□□□□□ -2.24
CTK3YML112W DRS2P39524 1355 aa1.03□□□□□ -2.24
CTK3YML112W BUD4P47136 1447 aa1.03□□□□□ -2.24
CTK3YML112W CYR1P08678 2026 aaKnown RBP1.03□□□□□ -2.25
CTK3YML112W CDC8P00572 216 aa1.02□□□□□ -2.25
CTK3YML112W RPL2AP0CX45 254 aaKnown RBP1.02□□□□□ -2.25
CTK3YML112W RPL2BP0CX46 254 aaKnown RBP1.02□□□□□ -2.25
CTK3YML112W GCN3P14741 305 aa1.02□□□□□ -2.25
CTK3YML112W IDP1P21954 428 aaKnown RBP1.02□□□□□ -2.25
CTK3YML112W PEX34P25584 144 aa1.02□□□□□ -2.25
CTK3YML112W BUB2P26448 306 aaPredicted RBP1.02□□□□□ -2.25
CTK3YML112W UGX2P32772 223 aa1.02□□□□□ -2.25
CTK3YML112W DOG2P38773 246 aa1.02□□□□□ -2.25
CTK3YML112W IPI1P38803 334 aaPredicted RBP1.02□□□□□ -2.25
CTK3YML112W CTR2P38865 189 aa1.02□□□□□ -2.25
CTK3YML112W GLE2P40066 365 aa1.02□□□□□ -2.25
CTK3YML112W PRE6P40303 254 aaKnown RBP1.02□□□□□ -2.25
CTK3YML112W IRC18P47056 224 aa1.02□□□□□ -2.25
CTK3YML112W MOG1P47123 218 aa1.02□□□□□ -2.25
CTK3YML112W BXI1P48558 297 aa1.02□□□□□ -2.25
CTK3YML112W UBC12P52491 188 aa1.02□□□□□ -2.25
CTK3YML112W MDS3P53094 1487 aa1.02□□□□□ -2.25
CTK3YML112W YNL184CP53876 108 aa1.02□□□□□ -2.25
CTK3YML112W SWP1Q02795 286 aa1.02□□□□□ -2.25
CTK3YML112W YDR476CQ03362 224 aa1.02□□□□□ -2.25
CTK3YML112W YMD8Q03697 442 aa1.02□□□□□ -2.25
CTK3YML112W YMR320WQ04897 101 aa1.02□□□□□ -2.25
CTK3YML112W SML1Q04964 104 aa1.02□□□□□ -2.25
CTK3YML112W SEI1Q06058 285 aa1.02□□□□□ -2.25
CTK3YML112W LDB18Q07887 179 aa1.02□□□□□ -2.25
CTK3YML112W CSI2Q08054 341 aa1.02□□□□□ -2.25
CTK3YML112W YLR050CQ12155 161 aaKnown RBP1.02□□□□□ -2.25
CTK3YML112W WIP1Q2V2P8 89 aa1.02□□□□□ -2.25
CTK3YML112W KIN28P06242 306 aa1.01□□□□□ -2.25
CTK3YML112W NMT1P14743 455 aa1.01□□□□□ -2.25
CTK3YML112W FCY2P17064 533 aa1.01□□□□□ -2.25
CTK3YML112W PET9P18239 318 aaKnown RBP1.01□□□□□ -2.25
CTK3YML112W TFC1P32367 649 aa1.01□□□□□ -2.25
CTK3YML112W PTM1P32857 523 aa1.01□□□□□ -2.25
CTK3YML112W SUI1P32911 108 aaKnown RBP1.01□□□□□ -2.25
CTK3YML112W CPR5P35176 225 aa1.01□□□□□ -2.25
CTK3YML112W TVP38P36164 337 aa1.01□□□□□ -2.25
CTK3YML112W RMD6P39975 231 aa1.01□□□□□ -2.25
CTK3YML112W PEX17P40155 199 aa1.01□□□□□ -2.25
CTK3YML112W RPL33BP41056 107 aaKnown RBP1.01□□□□□ -2.25
CTK3YML112W ORM1P53224 222 aa1.01□□□□□ -2.25
CTK3YML112W YNL046WP53956 172 aa1.01□□□□□ -2.25
CTK3YML112W UBC7Q02159 165 aa1.01□□□□□ -2.25
CTK3YML112W YML108WQ03759 105 aa1.01□□□□□ -2.25
CTK3YML112W FMN1Q03778 218 aa1.01□□□□□ -2.25
CTK3YML112W YDR278CQ05612 105 aa1.01□□□□□ -2.25
CTK3YML112W YOR342CQ12182 319 aa1.01□□□□□ -2.25
CTK3YML112W SIR2P06700 562 aa1□□□□□ -2.25
CTK3YML112W UBI4P0CG63 381 aaKnown RBP1□□□□□ -2.25
CTK3YML112W RPS1BP23248 255 aaKnown RBP1□□□□□ -2.25
CTK3YML112W ATG22P25568 528 aa1□□□□□ -2.25
CTK3YML112W SUA7P29055 345 aaPredicted RBP1□□□□□ -2.25
CTK3YML112W MRPL17P36528 281 aa1□□□□□ -2.25
CTK3YML112W POP4P38336 279 aa1□□□□□ -2.25
CTK3YML112W PDS1P40316 373 aaPredicted RBP1□□□□□ -2.25
CTK3YML112W ERJ5P43613 295 aaPredicted RBP1□□□□□ -2.25
CTK3YML112W RPA43P46669 326 aa1□□□□□ -2.25
CTK3YML112W ARL3Q02804 198 aa1□□□□□ -2.25
CTK3YML112W FRQ1Q06389 190 aa1□□□□□ -2.25
CTK3YML112W YPL162CQ12042 273 aa1□□□□□ -2.25
CTK3YML112W YLR046CQ12253 270 aa1□□□□□ -2.25
CTK3YML112W PST2Q12335 198 aaKnown RBP1□□□□□ -2.25
CTK3YML112W EFG1Q3E705 233 aaKnown RBP1□□□□□ -2.25
CTK3YML112W SLO1Q3E784 85 aa1□□□□□ -2.25
CTK3YML112W HSL1P34244 1518 aa0.99□□□□□ -2.25
CTK3YML112W MET5P47169 1442 aa0.99□□□□□ -2.25
CTK3YML112W PDR18P53756 1333 aa0.99□□□□□ -2.25
CTK3YML112W CMD1P06787 147 aaKnown RBP0.99□□□□□ -2.25
CTK3YML112W SEC4P07560 215 aaKnown RBP0.99□□□□□ -2.25
CTK3YML112W YER039C-AP0CD97 72 aa0.99□□□□□ -2.25
CTK3YML112W GPA2P10823 449 aa0.99□□□□□ -2.25
CTK3YML112W ERD2P18414 219 aa0.99□□□□□ -2.25
CTK3YML112W PHO13P19881 312 aa0.99□□□□□ -2.25
CTK3YML112W AHC2P25649 128 aa0.99□□□□□ -2.25
CTK3YML112W MGT1P26188 188 aa0.99□□□□□ -2.25
CTK3YML112W SPT14P32363 452 aa0.99□□□□□ -2.25
CTK3YML112W HYM1P32464 399 aa0.99□□□□□ -2.25
CTK3YML112W LHP1P33399 275 aaKnown RBP0.99□□□□□ -2.25
CTK3YML112W YKL102CP34249 101 aa0.99□□□□□ -2.25
CTK3YML112W APS1P35181 156 aa0.99□□□□□ -2.25
CTK3YML112W YKR070WP36151 352 aaKnown RBP0.99□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 104.4 ms