RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN13, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN13	YLR421C	YOR385W	Q08909	290 aa		2.76	□□□□□ -1.97
RPN13	YLR421C	MMT2	Q08970	484 aa		2.76	□□□□□ -1.97
RPN13	YLR421C	SRO7	Q12038	1033 aa		2.76	□□□□□ -1.97
RPN13	YLR421C	FYV7	Q12247	151 aa		2.76	□□□□□ -1.97
RPN13	YLR421C	RRP42	Q12277	265 aa	Predicted RBP	2.76	□□□□□ -1.97
RPN13	YLR421C	YLR118C	Q12354	227 aa		2.76	□□□□□ -1.97
RPN13	YLR421C	ERP3	Q12403	225 aa		2.76	□□□□□ -1.97
RPN13	YLR421C	COX19	Q3E731	98 aa		2.76	□□□□□ -1.97
RPN13	YLR421C	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.76	□□□□□ -1.97
RPN13	YLR421C	YCL012C	Q8J0M4	134 aa		2.76	□□□□□ -1.97
RPN13	YLR421C	STT4	P37297	1900 aa		2.76	□□□□□ -1.97
RPN13	YLR421C	TRP1	P00912	224 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	RPL23A	P0CX41	137 aa	Known RBP	2.75	□□□□□ -1.97
RPN13	YLR421C	RPL23B	P0CX42	137 aa	Known RBP	2.75	□□□□□ -1.97
RPN13	YLR421C	PPH21	P23594	369 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	PAU2	P32612	120 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	MGM101	P32787	269 aa	Known RBP	2.75	□□□□□ -1.97
RPN13	YLR421C	YPC1	P38298	316 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	PFS1	P38872	237 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	YIL029C	P40538	142 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	GLC8	P41818	229 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	WWM1	P43582	211 aa	Known RBP	2.75	□□□□□ -1.97
RPN13	YLR421C	CCC1	P47818	322 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	OST3	P48439	350 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	MGA1	P53050	456 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	VHT1	P53241	593 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	SLX9	P53251	210 aa	Predicted RBP	2.75	□□□□□ -1.97
RPN13	YLR421C	SHH3	Q04487	196 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	AVO2	Q04749	426 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	RNH202	Q05635	350 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	PIN3	Q06449	215 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	CTR3	Q06686	241 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	FDH1	Q08911	376 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	FCY22	Q12119	530 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	MCT1	Q12283	360 aa		2.75	□□□□□ -1.97
RPN13	YLR421C	SPT15	P13393	240 aa	Known RBP	2.74	□□□□□ -1.97
RPN13	YLR421C	MSI1	P13712	422 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	CPR4	P25334	318 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	ATG15	P25641	520 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	PEX4	P29340	183 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	MRPL11	P36521	249 aa	Predicted RBP	2.74	□□□□□ -1.97
RPN13	YLR421C	YBR096W	P38256	230 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	SPC25	P40014	221 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	PRM5	P40476	318 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	DFG10	P40526	253 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	LCB3	P47013	409 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	YJR056C	P47115	236 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	BNS1	P50084	137 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	NSA1	P53136	463 aa	Predicted RBP	2.74	□□□□□ -1.97
RPN13	YLR421C	CPD1	P53314	239 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	SPG3	Q04398	127 aa	Predicted RBP	2.74	□□□□□ -1.97
RPN13	YLR421C	YMR315W	Q04869	349 aa	Known RBP	2.74	□□□□□ -1.97
RPN13	YLR421C	PEX30	Q06169	523 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	HEM25	Q07534	307 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	LDB18	Q07887	179 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	POM33	Q12164	279 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	SME1	Q12330	94 aa	Predicted RBP	2.74	□□□□□ -1.97
RPN13	YLR421C	UTP23	Q12339	254 aa	Known RBP	2.74	□□□□□ -1.97
RPN13	YLR421C	ATG5	Q12380	294 aa		2.74	□□□□□ -1.97
RPN13	YLR421C	SOD1	P00445	154 aa	Known RBP	2.73	□□□□□ -1.97
RPN13	YLR421C	TPI1	P00942	248 aa	Known RBP	2.73	□□□□□ -1.97
RPN13	YLR421C	ADK1	P07170	222 aa	Known RBP	2.73	□□□□□ -1.97
RPN13	YLR421C	PAU19	P0CE85	124 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	PAU21	P0CE86	164 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	PAU22	P0CE87	164 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	CPR1	P14832	162 aa	Known RBP	2.73	□□□□□ -1.97
RPN13	YLR421C	CTA1	P15202	515 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	PAU3	P25610	124 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	RPL16B	P26785	198 aa	Known RBP	2.73	□□□□□ -1.97
RPN13	YLR421C	ERG24	P32462	438 aa	Known RBP	2.73	□□□□□ -1.97
RPN13	YLR421C	IES6	P32617	166 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	MRPS9	P38120	278 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	URA8	P38627	578 aa	Predicted RBP	2.73	□□□□□ -1.97
RPN13	YLR421C	GIM4	P40005	111 aa	Known RBP	2.73	□□□□□ -1.97
RPN13	YLR421C	YER188W	P40103	239 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	HIT1	P46973	164 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	NIF3	P53081	288 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	YGR015C	P53208	328 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	YGR042W	P53227	271 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	PGA1	P53896	198 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	ACT1	P60010	375 aa	Known RBP	2.73	□□□□□ -1.97
RPN13	YLR421C	YDR366C	P87287	132 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	RHO3	Q00245	231 aa	Known RBP	2.73	□□□□□ -1.97
RPN13	YLR421C	YPL067C	Q02754	198 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	YLR179C	Q06252	201 aa	Known RBP	2.73	□□□□□ -1.97
RPN13	YLR421C	COQ10	Q08058	207 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	ERV2	Q12284	196 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	YPR064W	Q12492	139 aa		2.73	□□□□□ -1.97
RPN13	YLR421C	COX5B	P00425	151 aa		2.72	□□□□□ -1.97
RPN13	YLR421C	COX9	P07255	59 aa		2.72	□□□□□ -1.97
RPN13	YLR421C	RPS25B	P0C0T4	108 aa	Known RBP	2.72	□□□□□ -1.97
RPN13	YLR421C	DDI2	P0CH63	225 aa		2.72	□□□□□ -1.97
RPN13	YLR421C	DDI3	P0CH64	225 aa		2.72	□□□□□ -1.97
RPN13	YLR421C	HAP3	P13434	144 aa		2.72	□□□□□ -1.97
RPN13	YLR421C	BGL2	P15703	313 aa	Known RBP	2.72	□□□□□ -1.97
RPN13	YLR421C	PPA2	P28239	310 aa		2.72	□□□□□ -1.97
RPN13	YLR421C	SUA7	P29055	345 aa	Predicted RBP	2.72	□□□□□ -1.97
RPN13	YLR421C	TIP20	P33891	701 aa		2.72	□□□□□ -1.97
RPN13	YLR421C	YKL075C	P36083	450 aa		2.72	□□□□□ -1.97
RPN13	YLR421C	SHE3	P38272	425 aa	Known RBP	2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms