RNA–Protein interactions for RNA: YJL124C

LSM1, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM1, Length 519 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM1	YJL124C	ETR1	P38071	380 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	YBL081W	P38180	368 aa	Known RBP	2.76	□□□□□ -1.97
LSM1	YJL124C	RFS1	P38234	210 aa	Known RBP	2.76	□□□□□ -1.97
LSM1	YJL124C	PHO89	P38361	574 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	YEA6	P39953	335 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	YEL075C	P39972	122 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	AVT2	P39981	480 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	IRC22	P40006	225 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	YER189W	P40104	122 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	YIL024C	P40543	189 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	SKI6	P46948	246 aa	Predicted RBP	2.76	□□□□□ -1.97
LSM1	YJL124C	RPE1	P46969	238 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	YGL230C	P53074	147 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	CLD1	P53264	445 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	GAS3	Q03655	524 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	LPP1	Q04396	274 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	SCW10	Q04951	389 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	RNH202	Q05635	350 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	YPR011C	Q12251	326 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	DGK1	Q12382	290 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	OCA6	Q12454	224 aa		2.76	□□□□□ -1.97
LSM1	YJL124C	REV3	P14284	1504 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	YLR462W	O13556	202 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	CDC43	P18898	376 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	PRE1	P22141	198 aa	Known RBP	2.75	□□□□□ -1.97
LSM1	YJL124C	SPT14	P32363	452 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	CSE2	P33308	149 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	UTP30	P36144	274 aa	Known RBP	2.75	□□□□□ -1.97
LSM1	YJL124C	YBR090C	P38253	122 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	NSG1	P38837	291 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	RPB11	P38902	120 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	YNL208W	P40159	199 aa	Known RBP	2.75	□□□□□ -1.97
LSM1	YJL124C	YIL012W	P40551	113 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	SBH1	P52870	82 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	YGL262W	P53054	175 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	SWT21	P53873	357 aa	Predicted RBP	2.75	□□□□□ -1.97
LSM1	YJL124C	BUD25	P85052	153 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	YDR415C	Q04033	374 aa	Predicted RBP	2.75	□□□□□ -1.97
LSM1	YJL124C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.75	□□□□□ -1.97	not detected
LSM1	YJL124C	YLR042C	Q07990	161 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	HUT1	Q12520	339 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	YFR032C-B	Q8TGU2	87 aa		2.75	□□□□□ -1.97
LSM1	YJL124C	ATR1	P13090	542 aa		2.74	□□□□□ -1.97
LSM1	YJL124C	RPB3	P16370	318 aa	Known RBP	2.74	□□□□□ -1.97
LSM1	YJL124C	URE2	P23202	354 aa	Known RBP	2.74	□□□□□ -1.97
LSM1	YJL124C	RPL14A	P36105	138 aa	Known RBP	2.74	□□□□□ -1.97
LSM1	YJL124C	SKG1	P36169	355 aa		2.74	□□□□□ -1.97
LSM1	YJL124C	RPL14B	P38754	138 aa	Known RBP	2.74	□□□□□ -1.97
LSM1	YJL124C	PTI1	P39927	425 aa	Predicted RBP	2.74	□□□□□ -1.97
LSM1	YJL124C	YGL193C	P53097	103 aa		2.74	□□□□□ -1.97
LSM1	YJL124C	NIP7	Q08962	181 aa	Known RBP	2.74	□□□□□ -1.97
LSM1	YJL124C	YDL211C	Q12121	372 aa		2.74	□□□□□ -1.97
LSM1	YJL124C	YOR020W-A	Q3E824	90 aa		2.74	□□□□□ -1.97
LSM1	YJL124C	YPR170W-B	P0C5R9	85 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	BGL2	P15703	313 aa	Known RBP	2.73	□□□□□ -1.97
LSM1	YJL124C	RPB5	P20434	215 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	BET1	P22804	142 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	HYP2	P23301	157 aa	Known RBP	2.73	□□□□□ -1.97
LSM1	YJL124C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
LSM1	YJL124C	OM14	P38325	134 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	AVT6	P40074	448 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	FIS1	P40515	155 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	YJL218W	P40892	196 aa	Known RBP	2.73	□□□□□ -1.97
LSM1	YJL124C	NCA3	P46955	337 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	DIE2	P50076	525 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	YGR015C	P53208	328 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	EMI1	Q04406	187 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	YLR179C	Q06252	201 aa	Known RBP	2.73	□□□□□ -1.97
LSM1	YJL124C	SCP1	Q08873	200 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	TIM22	Q12328	207 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	IZH2	Q12442	317 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	YAL063C-A	Q3E791	96 aa		2.73	□□□□□ -1.97
LSM1	YJL124C	TRP1	P00912	224 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	REP2	P03872	296 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	PEX4	P29340	183 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	AHT1	P29589	182 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	ZRT3	P34240	503 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	PFS2	P42841	465 aa	Known RBP	2.72	□□□□□ -1.97
LSM1	YJL124C	STB1	P42845	420 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	NSE4	P43124	402 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	SNO3	P43544	222 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	GON7	P46984	123 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	OSH6	Q02201	448 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	YMR254C	Q04838	102 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	FMP42	Q04991	504 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	UPS1	Q05776	175 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	TRM3	Q07527	1436 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	YOL014W	Q08110	124 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	SLD7	Q08457	257 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	YPL264C	Q08980	353 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	GTT2	Q12390	233 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	YCR075W-A	Q3E830	75 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	YML100W-A	Q8TGT0	57 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	HSL1	P34244	1518 aa		2.72	□□□□□ -1.97
LSM1	YJL124C	MYO2	P19524	1574 aa	Known RBP	2.71	□□□□□ -1.98
LSM1	YJL124C	RPL42A	P0CX27	106 aa	Known RBP	2.71	□□□□□ -1.98
LSM1	YJL124C	RPL42B	P0CX28	106 aa	Known RBP	2.71	□□□□□ -1.98
LSM1	YJL124C	URA5	P13298	226 aa	Known RBP	2.71	□□□□□ -1.98
LSM1	YJL124C	SPT15	P13393	240 aa	Known RBP	2.71	□□□□□ -1.98
LSM1	YJL124C	UBC5	P15732	148 aa		2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms