RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C YPR145C-AQ2V2P0 78 aa6.41□□□□□ -1.38
SNP1YIL061C SHM2P37291 469 aaKnown RBP6.4□□□□□ -1.38
SNP1YIL061C ATG8P38182 117 aaRIP-Chip data6.4□□□□□ -1.38not detected
SNP1YIL061C CUE1P38428 203 aa6.4□□□□□ -1.38
SNP1YIL061C YHR138CP38841 114 aaPredicted RBP6.4□□□□□ -1.38
SNP1YIL061C PSD1P39006 500 aa6.4□□□□□ -1.38
SNP1YIL061C COX15P40086 486 aa6.4□□□□□ -1.38
SNP1YIL061C YGR269WP40326 108 aa6.4□□□□□ -1.38
SNP1YIL061C HXT14P42833 540 aa6.4□□□□□ -1.38
SNP1YIL061C TTI2P47168 421 aa6.4□□□□□ -1.38
SNP1YIL061C TIM21P53220 239 aa6.4□□□□□ -1.38
SNP1YIL061C DCS1Q06151 350 aa6.4□□□□□ -1.38
SNP1YIL061C YGL262WP53054 175 aa6.39□□□□□ -1.39
SNP1YIL061C RPL21AQ02753 160 aaKnown RBP6.39□□□□□ -1.39
SNP1YIL061C YTH1Q06102 208 aaPredicted RBP6.39□□□□□ -1.39
SNP1YIL061C YPS3Q12303 508 aa6.39□□□□□ -1.39
SNP1YIL061C RPL21BQ12672 160 aaKnown RBP6.39□□□□□ -1.39
SNP1YIL061C YBR056W-AI2HB52 66 aa6.38□□□□□ -1.39
SNP1YIL061C RPL39P04650 51 aa6.38□□□□□ -1.39
SNP1YIL061C ADH3P07246 375 aaKnown RBP6.38□□□□□ -1.39
SNP1YIL061C MRPL33P20084 86 aa6.38□□□□□ -1.39
SNP1YIL061C SPO13P23624 291 aa6.38□□□□□ -1.39
SNP1YIL061C ELO2P25358 347 aa6.38□□□□□ -1.39
SNP1YIL061C CDC50P25656 391 aa6.38□□□□□ -1.39
SNP1YIL061C DAL3P32459 195 aa6.38□□□□□ -1.39
SNP1YIL061C SHB17P36136 271 aaKnown RBP6.38□□□□□ -1.39
SNP1YIL061C PIR5P46999 287 aa6.38□□□□□ -1.39
SNP1YIL061C YJL118WP47022 219 aa6.38□□□□□ -1.39
SNP1YIL061C PAU4P53427 120 aa6.38□□□□□ -1.39
SNP1YIL061C YNL046WP53956 172 aa6.38□□□□□ -1.39
SNP1YIL061C SED1Q01589 338 aa6.38□□□□□ -1.39
SNP1YIL061C LRS4Q04087 347 aaKnown RBP6.38□□□□□ -1.39
SNP1YIL061C LPP1Q04396 274 aa6.38□□□□□ -1.39
SNP1YIL061C ZEO1Q08245 113 aa6.38□□□□□ -1.39
SNP1YIL061C YGL258W-AQ3E740 77 aa6.38□□□□□ -1.39
SNP1YIL061C YMR105W-AQ8TGS8 64 aa6.38□□□□□ -1.39
SNP1YIL061C CUP1-1P0CX80 61 aa6.37□□□□□ -1.39
SNP1YIL061C CUP1-2P0CX81 61 aa6.37□□□□□ -1.39
SNP1YIL061C FCY2P17064 533 aa6.37□□□□□ -1.39
SNP1YIL061C SEC59P20048 519 aa6.37□□□□□ -1.39
SNP1YIL061C QCR9P22289 66 aa6.37□□□□□ -1.39
SNP1YIL061C DAL80P26343 269 aa6.37□□□□□ -1.39
SNP1YIL061C MRPL4P36517 319 aa6.37□□□□□ -1.39
SNP1YIL061C YGP1P38616 354 aaKnown RBP6.37□□□□□ -1.39
SNP1YIL061C GTT1P40582 234 aa6.37□□□□□ -1.39
SNP1YIL061C PHS1P40857 217 aa6.37□□□□□ -1.39
SNP1YIL061C MOG1P47123 218 aa6.37□□□□□ -1.39
SNP1YIL061C BNS1P50084 137 aa6.37□□□□□ -1.39
SNP1YIL061C RIB4P50861 169 aaPredicted RBP6.37□□□□□ -1.39
SNP1YIL061C USV1Q12132 391 aa6.37□□□□□ -1.39
SNP1YIL061C YOR029WQ12243 111 aa6.37□□□□□ -1.39
SNP1YIL061C RPL9AP05738 191 aaKnown RBP6.36□□□□□ -1.39
SNP1YIL061C URA5P13298 226 aaKnown RBP6.36□□□□□ -1.39
SNP1YIL061C LAC1P28496 418 aa6.36□□□□□ -1.39
SNP1YIL061C RPL14AP36105 138 aaKnown RBP6.36□□□□□ -1.39
SNP1YIL061C RPL14BP38754 138 aaKnown RBP6.36□□□□□ -1.39
SNP1YIL061C RTC3P38804 111 aaPredicted RBP6.36□□□□□ -1.39
SNP1YIL061C VMA21P41806 77 aa6.36□□□□□ -1.39
SNP1YIL061C DAN1P47178 298 aa6.36□□□□□ -1.39
SNP1YIL061C YLR118CQ12354 227 aa6.36□□□□□ -1.39
SNP1YIL061C PRP8P33334 2413 aaKnown RBP6.35□□□□□ -1.39
SNP1YIL061C RPS25BP0C0T4 108 aaKnown RBP6.35□□□□□ -1.39
SNP1YIL061C PAU1P0CE88 120 aa6.35□□□□□ -1.39
SNP1YIL061C PAU14P0CE89 120 aa6.35□□□□□ -1.39
SNP1YIL061C PAU6P0CE90 120 aa6.35□□□□□ -1.39
SNP1YIL061C PAU18P0CE91 120 aa6.35□□□□□ -1.39
SNP1YIL061C PAU8P0CE92 120 aa6.35□□□□□ -1.39
SNP1YIL061C PAU11P0CE93 120 aa6.35□□□□□ -1.39
SNP1YIL061C ATP10P18496 279 aa6.35□□□□□ -1.39
SNP1YIL061C ACP1P32463 125 aa6.35□□□□□ -1.39
SNP1YIL061C NTF2P33331 125 aaKnown RBP6.35□□□□□ -1.39
SNP1YIL061C SOR1P35497 357 aaKnown RBP6.35□□□□□ -1.39
SNP1YIL061C SDH4P37298 181 aa6.35□□□□□ -1.39
SNP1YIL061C PAU13P38725 120 aa6.35□□□□□ -1.39
SNP1YIL061C WSS1P38838 269 aa6.35□□□□□ -1.39
SNP1YIL061C DFG10P40526 253 aa6.35□□□□□ -1.39
SNP1YIL061C PAU15P40585 124 aa6.35□□□□□ -1.39
SNP1YIL061C NSE4P43124 402 aa6.35□□□□□ -1.39
SNP1YIL061C YFL015CP43578 164 aa6.35□□□□□ -1.39
SNP1YIL061C BNA2P47125 453 aa6.35□□□□□ -1.39
SNP1YIL061C RPL9BP51401 191 aaKnown RBP6.35□□□□□ -1.39
SNP1YIL061C YGR026WP53217 278 aa6.35□□□□□ -1.39
SNP1YIL061C PAU10Q03050 120 aa6.35□□□□□ -1.39
SNP1YIL061C FRQ1Q06389 190 aa6.35□□□□□ -1.39
SNP1YIL061C CTR3Q06686 241 aa6.35□□□□□ -1.39
SNP1YIL061C SOR2Q07786 357 aa6.35□□□□□ -1.39
SNP1YIL061C PAU20Q08322 120 aa6.35□□□□□ -1.39
SNP1YIL061C SME1Q12330 94 aaPredicted RBP6.35□□□□□ -1.39
SNP1YIL061C PAU9Q3E770 120 aa6.35□□□□□ -1.39
SNP1YIL061C RPS25AQ3E792 108 aaPredicted RBP6.35□□□□□ -1.39
SNP1YIL061C APA2P22108 325 aa6.34□□□□□ -1.39
SNP1YIL061C YBL059WP34224 193 aa6.34□□□□□ -1.39
SNP1YIL061C MRPS9P38120 278 aa6.34□□□□□ -1.39
SNP1YIL061C TRS20P38334 175 aa6.34□□□□□ -1.39
SNP1YIL061C ECM14P38836 430 aa6.34□□□□□ -1.39
SNP1YIL061C SGN1P40561 250 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
SNP1YIL061C AVO2Q04749 426 aa6.34□□□□□ -1.39
SNP1YIL061C DAL4Q04895 635 aa6.34□□□□□ -1.39
SNP1YIL061C POC4Q12245 148 aaPredicted RBP6.34□□□□□ -1.39
SNP1YIL061C ERV2Q12284 196 aa6.34□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms