RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	USV1	Q12132	391 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	PRR2	Q12310	699 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	RPL21B	Q12672	160 aa	Known RBP	3.74	□□□□□ -1.81
UPC2	YDR213W	UBA3	Q99344	299 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	POL2	P21951	2222 aa	Known RBP	3.74	□□□□□ -1.81
UPC2	YDR213W	MES1	P00958	751 aa	Known RBP	3.73	□□□□□ -1.81
UPC2	YDR213W	CPR1	P14832	162 aa	Known RBP	3.73	□□□□□ -1.81
UPC2	YDR213W	FEN2	P25621	512 aa	Known RBP	3.73	□□□□□ -1.81
UPC2	YDR213W	YKL187C	P34231	750 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	PHD1	P36093	366 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	LOC1	P43586	204 aa	Predicted RBP	3.73	□□□□□ -1.81
UPC2	YDR213W	ERJ5	P43613	295 aa	Predicted RBP	3.73	□□□□□ -1.81
UPC2	YDR213W	YGR126W	P53274	230 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	DIA1	P54005	336 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	IZH1	Q03419	316 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	LEU9	Q12166	604 aa	Known RBP	3.73	□□□□□ -1.81
UPC2	YDR213W	YOP1	Q12402	180 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	IRA1	P18963	3092 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	RPL20A	P0CX23	172 aa	Known RBP	3.73	□□□□□ -1.81
UPC2	YDR213W	RPL20B	P0CX24	172 aa	Predicted RBP	3.73	□□□□□ -1.81
UPC2	YDR213W	ERG2	P32352	222 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	REC114	P32841	428 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
UPC2	YDR213W	YAR1	P46683	200 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	YGL235W	P53071	178 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	APS2	Q00381	147 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	MRPL1	Q04599	285 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	MCH4	Q08268	501 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	WIP1	Q2V2P8	89 aa		3.73	□□□□□ -1.81
UPC2	YDR213W	MSY1	P48527	492 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	YDL183C	P48569	320 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	ERG25	P53045	309 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	SSU72	P53538	206 aa	Predicted RBP	3.72	□□□□□ -1.81
UPC2	YDR213W	MSO1	P53604	210 aa	Known RBP	3.72	□□□□□ -1.81
UPC2	YDR213W	YPL077C	Q02831	240 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	POS5	Q06892	414 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	FRM2	P37261	193 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	QDR3	P38227	689 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	YBR090C	P38253	122 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	YIL163C	P40448	117 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	SEC24	P40482	926 aa	Known RBP	3.72	□□□□□ -1.81
UPC2	YDR213W	FHN1	P53279	174 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	SAM50	P53969	484 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	ERG13	P54839	491 aa	Known RBP	3.72	□□□□□ -1.81
UPC2	YDR213W	ARC18	Q05933	178 aa	Known RBP	3.72	□□□□□ -1.81
UPC2	YDR213W	PAU23	Q07987	124 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	PAU17	Q12370	124 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	HUT1	Q12520	339 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	CUP2	P15315	225 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	ARO2	P28777	376 aa	Known RBP	3.72	□□□□□ -1.81
UPC2	YDR213W	AHT1	P29589	182 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	YKL071W	P36086	256 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	TEM1	P38987	245 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	PFA4	Q12006	378 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	GEP5	Q12393	293 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	YCR024C-B	Q3E7Z8	88 aa		3.72	□□□□□ -1.81
UPC2	YDR213W	CDC43	P18898	376 aa		3.71	□□□□□ -1.82
UPC2	YDR213W	SWD2	P36104	329 aa	Predicted RBP	3.71	□□□□□ -1.82
UPC2	YDR213W	POA1	P38218	177 aa		3.71	□□□□□ -1.82
UPC2	YDR213W	YND1	P40009	630 aa		3.71	□□□□□ -1.82
UPC2	YDR213W	PRE5	P40302	234 aa	Known RBP	3.71	□□□□□ -1.82
UPC2	YDR213W	CUP9	P41817	306 aa		3.71	□□□□□ -1.82
UPC2	YDR213W	SMD3	P43321	101 aa	Known RBP	3.71	□□□□□ -1.82
UPC2	YDR213W	DIG2	Q03373	323 aa	Known RBP	3.71	□□□□□ -1.82
UPC2	YDR213W	NUP1	P20676	1076 aa		3.71	□□□□□ -1.82
UPC2	YDR213W	YPT53	P36019	220 aa		3.71	□□□□□ -1.82
UPC2	YDR213W	HUA1	P40325	198 aa		3.71	□□□□□ -1.82
UPC2	YDR213W	DUG3	P53871	357 aa		3.71	□□□□□ -1.82
UPC2	YDR213W	YMR007W	Q03675	126 aa		3.71	□□□□□ -1.82
UPC2	YDR213W	YOS1	Q3E834	85 aa		3.71	□□□□□ -1.82
UPC2	YDR213W	MBF1	O14467	151 aa	Known RBP	3.7	□□□□□ -1.82
UPC2	YDR213W	RPI1	P23250	407 aa	Known RBP	3.7	□□□□□ -1.82
UPC2	YDR213W	RPB11	P38902	120 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	YHM2	Q04013	314 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	GRE1	Q08969	168 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	SUT2	Q12286	268 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	UTP23	Q12339	254 aa	Known RBP	3.7	□□□□□ -1.82
UPC2	YDR213W	ATO3	Q12359	275 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	HUG1	Q6Q5K6	68 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	RAD23	P32628	398 aa	Known RBP	3.7	□□□□□ -1.82
UPC2	YDR213W	PAU16	P35994	123 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	WSC4	P38739	605 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	YHR180W	P38868	163 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	RPL13B	P40212	199 aa	Known RBP	3.7	□□□□□ -1.82
UPC2	YDR213W	YIL169C	P40442	995 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	CRH1	P53301	507 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	YMR166C	Q03829	368 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	YDR102C	Q03864	110 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	CTS2	Q06350	511 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	YPR174C	Q06616	221 aa	Predicted RBP	3.7	□□□□□ -1.82
UPC2	YDR213W	YOR105W	Q08504	108 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	FSF1	Q12029	327 aa	Known RBP	3.7	□□□□□ -1.82
UPC2	YDR213W	RKI1	Q12189	258 aa		3.7	□□□□□ -1.82
UPC2	YDR213W	RPL13A	Q12690	199 aa	Predicted RBP	3.7	□□□□□ -1.82
UPC2	YDR213W	NUM1	Q00402	2748 aa		3.69	□□□□□ -1.82
UPC2	YDR213W	PAI3	P01094	68 aa		3.69	□□□□□ -1.82
UPC2	YDR213W	SEC11	P15367	167 aa		3.69	□□□□□ -1.82
UPC2	YDR213W	SPS18	P32572	300 aa		3.69	□□□□□ -1.82
UPC2	YDR213W	YNL198C	P40166	100 aa		3.69	□□□□□ -1.82
UPC2	YDR213W	YJL163C	P46996	555 aa		3.69	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms