RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C PDR17P53844 350 aa-0.16□□□□□ -2.44
CSN9YDR179C YDC1Q02896 317 aa-0.16□□□□□ -2.44
CSN9YDR179C RPL28P02406 149 aaKnown RBP-0.17□□□□□ -2.44
CSN9YDR179C YCR016WP25617 290 aaKnown RBP-0.17□□□□□ -2.44
CSN9YDR179C YUH1P35127 236 aa-0.17□□□□□ -2.44
CSN9YDR179C IRC18P47056 224 aa-0.17□□□□□ -2.44
CSN9YDR179C ALG13P53178 202 aa-0.17□□□□□ -2.44
CSN9YDR179C MDM32Q12171 622 aa-0.17□□□□□ -2.44
CSN9YDR179C YAR023CD6VPM8 179 aa-0.18□□□□□ -2.44
CSN9YDR179C YCR023CP25351 611 aa-0.18□□□□□ -2.44
CSN9YDR179C VMA6P32366 345 aaKnown RBP-0.18□□□□□ -2.44
CSN9YDR179C YBL010CP32788 280 aa-0.18□□□□□ -2.44
CSN9YDR179C RIB7P33312 244 aa-0.18□□□□□ -2.44
CSN9YDR179C ERG10P41338 398 aaKnown RBP-0.18□□□□□ -2.44
CSN9YDR179C RRP17Q04031 235 aaPredicted RBP-0.18□□□□□ -2.44
CSN9YDR179C UPS1Q05776 175 aa-0.18□□□□□ -2.44
CSN9YDR179C GGA1Q06336 557 aa-0.18□□□□□ -2.44
CSN9YDR179C KEI1Q06346 221 aa-0.18□□□□□ -2.44
CSN9YDR179C JLP1Q12358 412 aa-0.18□□□□□ -2.44
CSN9YDR179C RPL24BP24000 155 aaKnown RBP-0.19□□□□□ -2.44
CSN9YDR179C YCR001WP25347 104 aa-0.19□□□□□ -2.44
CSN9YDR179C BMH2P34730 273 aaKnown RBP-0.19□□□□□ -2.44
CSN9YDR179C YKR070WP36151 352 aaKnown RBP-0.19□□□□□ -2.44
CSN9YDR179C ETR1P38071 380 aa-0.19□□□□□ -2.44
CSN9YDR179C HHY1P39982 102 aa-0.19□□□□□ -2.44
CSN9YDR179C YNL033WP53964 284 aa-0.19□□□□□ -2.44
CSN9YDR179C PET117Q02771 107 aa-0.19□□□□□ -2.44
CSN9YDR179C FUS2Q05670 677 aa-0.19□□□□□ -2.44
CSN9YDR179C RRT8Q08219 342 aa-0.19□□□□□ -2.44
CSN9YDR179C ADF1Q2V2Q1 113 aa-0.19□□□□□ -2.44
CSN9YDR179C STF2P16965 84 aa-0.2□□□□□ -2.44
CSN9YDR179C PTC1P35182 281 aa-0.2□□□□□ -2.44
CSN9YDR179C PAM17P36147 197 aa-0.2□□□□□ -2.44
CSN9YDR179C MTW1P39731 289 aa-0.2□□□□□ -2.44
CSN9YDR179C CUP9P41817 306 aa-0.2□□□□□ -2.44
CSN9YDR179C SKI6P46948 246 aaPredicted RBP-0.2□□□□□ -2.44
CSN9YDR179C YMR099CQ03161 297 aaKnown RBP-0.2□□□□□ -2.44
CSN9YDR179C YOR015WQ12169 119 aa-0.2□□□□□ -2.44
CSN9YDR179C DGK1Q12382 290 aa-0.2□□□□□ -2.44
CSN9YDR179C YMR030W-AQ3E760 96 aa-0.2□□□□□ -2.44
CSN9YDR179C YOL013W-AP0C272 63 aaPredicted RBP-0.21□□□□□ -2.44
CSN9YDR179C MATALPHA1P0CY06 175 aa-0.21□□□□□ -2.44
CSN9YDR179C HMLALPHA1P0CY07 175 aa-0.21□□□□□ -2.44
CSN9YDR179C SNF4P12904 322 aa-0.21□□□□□ -2.44
CSN9YDR179C YMR31P19955 123 aa-0.21□□□□□ -2.44
CSN9YDR179C SER2P42941 309 aa-0.21□□□□□ -2.44
CSN9YDR179C YGL235WP53071 178 aa-0.21□□□□□ -2.44
CSN9YDR179C PST2Q12335 198 aaKnown RBP-0.21□□□□□ -2.44
CSN9YDR179C YIL177CP40434 1758 aa-0.22□□□□□ -2.44
CSN9YDR179C YJL225CP40889 1758 aa-0.22□□□□□ -2.44
CSN9YDR179C PRE1P22141 198 aaKnown RBP-0.22□□□□□ -2.44
CSN9YDR179C MSN4P33749 630 aa-0.22□□□□□ -2.44
CSN9YDR179C GRX5Q02784 150 aa-0.22□□□□□ -2.44
CSN9YDR179C THP2O13539 261 aaKnown RBP-0.23□□□□□ -2.45
CSN9YDR179C MER1P16523 270 aa-0.23□□□□□ -2.45
CSN9YDR179C IDP1P21954 428 aaKnown RBP-0.23□□□□□ -2.45
CSN9YDR179C CNB1P25296 175 aa-0.23□□□□□ -2.45
CSN9YDR179C MGT1P26188 188 aa-0.23□□□□□ -2.45
CSN9YDR179C PDS1P40316 373 aaPredicted RBP-0.23□□□□□ -2.45
CSN9YDR179C YRB1P41920 201 aaKnown RBP-0.23□□□□□ -2.45
CSN9YDR179C MGA1P53050 456 aa-0.23□□□□□ -2.45
CSN9YDR179C YMR253CQ04835 414 aa-0.23□□□□□ -2.45
CSN9YDR179C YLR036CQ07986 203 aa-0.23□□□□□ -2.45
CSN9YDR179C YBR121C-AP0C5L4 52 aa-0.24□□□□□ -2.45
CSN9YDR179C TIR1P10863 254 aa-0.24□□□□□ -2.45
CSN9YDR179C MAK31P23059 88 aa-0.24□□□□□ -2.45
CSN9YDR179C MIC12P38341 106 aa-0.24□□□□□ -2.45
CSN9YDR179C MPM1P40364 252 aa-0.24□□□□□ -2.45
CSN9YDR179C HHT1P61830 136 aa-0.24□□□□□ -2.45
CSN9YDR179C PIR1Q03178 341 aa-0.24□□□□□ -2.45
CSN9YDR179C FAS1P07149 2051 aaKnown RBP-0.25□□□□□ -2.45
CSN9YDR179C RHO1P06780 209 aaKnown RBP-0.25□□□□□ -2.45
CSN9YDR179C SHB17P36136 271 aaKnown RBP-0.25□□□□□ -2.45
CSN9YDR179C SPC25P40014 221 aa-0.25□□□□□ -2.45
CSN9YDR179C ADO1P47143 340 aaKnown RBP-0.25□□□□□ -2.45
CSN9YDR179C YGL230CP53074 147 aa-0.25□□□□□ -2.45
CSN9YDR179C YHP1Q04116 353 aa-0.25□□□□□ -2.45
CSN9YDR179C PPA2P28239 310 aa-0.26□□□□□ -2.45
CSN9YDR179C YKR005CQ02203 525 aa-0.26□□□□□ -2.45
CSN9YDR179C YMR315WQ04869 349 aaKnown RBP-0.26□□□□□ -2.45
CSN9YDR179C YLR031WQ07978 186 aa-0.26□□□□□ -2.45
CSN9YDR179C NCB2Q92317 146 aa-0.26□□□□□ -2.45
CSN9YDR179C MBF1O14467 151 aaKnown RBP-0.27□□□□□ -2.45
CSN9YDR179C RPL43AP0CX25 92 aaKnown RBP-0.27□□□□□ -2.45
CSN9YDR179C RPL43BP0CX26 92 aa-0.27□□□□□ -2.45
CSN9YDR179C RPS24AP0CX31 135 aaKnown RBP-0.27□□□□□ -2.45
CSN9YDR179C RPS24BP0CX32 135 aaKnown RBP-0.27□□□□□ -2.45
CSN9YDR179C YOL014WQ08110 124 aa-0.27□□□□□ -2.45
CSN9YDR179C YLR307C-AQ3E825 87 aa-0.27□□□□□ -2.45
CSN9YDR179C YML100W-AQ8TGT0 57 aa-0.27□□□□□ -2.45
CSN9YDR179C NTG1P31378 399 aa-0.28□□□□□ -2.45
CSN9YDR179C YER085CP40058 173 aa-0.28□□□□□ -2.45
CSN9YDR179C CIN5P40917 295 aa-0.28□□□□□ -2.45
CSN9YDR179C TMA22P47089 198 aaPredicted RBP-0.28□□□□□ -2.45
CSN9YDR179C TDA4P47153 279 aa-0.28□□□□□ -2.45
CSN9YDR179C YOR072WQ08486 104 aa-0.28□□□□□ -2.45
CSN9YDR179C YKL183C-AQ3E765 70 aa-0.28□□□□□ -2.45
CSN9YDR179C PRP18P33411 251 aaPredicted RBP-0.29□□□□□ -2.46
CSN9YDR179C YCR087C-AP37263 153 aa-0.29□□□□□ -2.46
CSN9YDR179C CCS1P40202 249 aaKnown RBP-0.29□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms