RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W TRM10Q12400 293 aa3.3□□□□□ -1.88
HPR1YDR138W RPL28P02406 149 aaKnown RBP3.3□□□□□ -1.88
HPR1YDR138W YFR010W-AP0C5N0 62 aa3.3□□□□□ -1.88
HPR1YDR138W PPH21P23594 369 aa3.3□□□□□ -1.88
HPR1YDR138W ARO2P28777 376 aaKnown RBP3.3□□□□□ -1.88
HPR1YDR138W OM14P38325 134 aa3.3□□□□□ -1.88
HPR1YDR138W YEA6P39953 335 aa3.3□□□□□ -1.88
HPR1YDR138W NUP57P48837 541 aa3.3□□□□□ -1.88
HPR1YDR138W YNL046WP53956 172 aa3.3□□□□□ -1.88
HPR1YDR138W YDR366CP87287 132 aa3.3□□□□□ -1.88
HPR1YDR138W OSH6Q02201 448 aa3.3□□□□□ -1.88
HPR1YDR138W RAV2Q03956 351 aa3.3□□□□□ -1.88
HPR1YDR138W LIP2Q06005 328 aa3.3□□□□□ -1.88
HPR1YDR138W YTH1Q06102 208 aaPredicted RBP3.3□□□□□ -1.88
HPR1YDR138W TY1B-DR5P0C2I2 1755 aa3.29□□□□□ -1.88
HPR1YDR138W TY1B-DR6P0C2I3 1755 aa3.29□□□□□ -1.88
HPR1YDR138W TY1B-LR2P0C2I5 1755 aa3.29□□□□□ -1.88
HPR1YDR138W TY1B-LR3P0C2I6 1755 aaKnown RBP3.29□□□□□ -1.88
HPR1YDR138W TY1B-PR1P0C2I9 1755 aaKnown RBP3.29□□□□□ -1.88
HPR1YDR138W TY1B-PR3P0C2J1 1755 aaKnown RBP3.29□□□□□ -1.88
HPR1YDR138W TY1B-JR1P47098 1755 aa3.29□□□□□ -1.88
HPR1YDR138W TY1B-ML2Q03434 1755 aaKnown RBP3.29□□□□□ -1.88
HPR1YDR138W TY1B-ER1Q03612 1755 aa3.29□□□□□ -1.88
HPR1YDR138W TY1B-ML1Q04711 1755 aaKnown RBP3.29□□□□□ -1.88
HPR1YDR138W TY1B-GR2Q12269 1755 aa3.29□□□□□ -1.88
HPR1YDR138W TY1B-OLQ12273 1755 aa3.29□□□□□ -1.88
HPR1YDR138W TY1B-PLQ12414 1755 aaKnown RBP3.29□□□□□ -1.88
HPR1YDR138W YER039C-AP0CD97 72 aa3.29□□□□□ -1.88
HPR1YDR138W RPS20P38701 121 aaKnown RBP3.29□□□□□ -1.88
HPR1YDR138W YHL026CP38740 315 aa3.29□□□□□ -1.88
HPR1YDR138W INP1Q03694 420 aa3.29□□□□□ -1.88
HPR1YDR138W ATG10Q07879 167 aa3.29□□□□□ -1.88
HPR1YDR138W UFD4P33202 1483 aa3.29□□□□□ -1.88
HPR1YDR138W IRC20Q06554 1556 aa3.29□□□□□ -1.88
HPR1YDR138W YLR462WO13556 202 aa3.28□□□□□ -1.88
HPR1YDR138W RPL9AP05738 191 aaKnown RBP3.28□□□□□ -1.88
HPR1YDR138W GLE2P40066 365 aa3.28□□□□□ -1.88
HPR1YDR138W YFL064CP43540 174 aa3.28□□□□□ -1.88
HPR1YDR138W YJR015WP47090 510 aa3.28□□□□□ -1.88
HPR1YDR138W MCM22P47167 239 aa3.28□□□□□ -1.88
HPR1YDR138W RPL9BP51401 191 aaKnown RBP3.28□□□□□ -1.88
HPR1YDR138W YGL039WP53183 348 aaKnown RBP3.28□□□□□ -1.88
HPR1YDR138W SLM2P53955 656 aa3.28□□□□□ -1.88
HPR1YDR138W HHT1P61830 136 aa3.28□□□□□ -1.88
HPR1YDR138W API2Q04413 109 aa3.28□□□□□ -1.88
HPR1YDR138W MRX8Q05473 314 aa3.28□□□□□ -1.88
HPR1YDR138W SFC1P33303 322 aa3.28□□□□□ -1.88
HPR1YDR138W SNC2P33328 115 aa3.28□□□□□ -1.88
HPR1YDR138W YMR144WP40214 342 aaKnown RBP3.28□□□□□ -1.88
HPR1YDR138W RPL21AQ02753 160 aaKnown RBP3.28□□□□□ -1.88
HPR1YDR138W PET191Q02772 108 aa3.28□□□□□ -1.88
HPR1YDR138W HPT1Q04178 221 aaKnown RBP3.28□□□□□ -1.88
HPR1YDR138W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
HPR1YDR138W YOR186WQ08560 144 aa3.28□□□□□ -1.88
HPR1YDR138W YOL163WP0CF20 169 aa3.27□□□□□ -1.89
HPR1YDR138W UBI4P0CG63 381 aaKnown RBP3.27□□□□□ -1.89
HPR1YDR138W MRPL28P36527 147 aa3.27□□□□□ -1.89
HPR1YDR138W ERV15P38312 142 aa3.27□□□□□ -1.89
HPR1YDR138W YHR130CP38834 111 aa3.27□□□□□ -1.89
HPR1YDR138W YIL012WP40551 113 aa3.27□□□□□ -1.89
HPR1YDR138W COQ5P49017 307 aa3.27□□□□□ -1.89
HPR1YDR138W SHH3Q04487 196 aa3.27□□□□□ -1.89
HPR1YDR138W RNH202Q05635 350 aa3.27□□□□□ -1.89
HPR1YDR138W SPC3Q12133 184 aa3.27□□□□□ -1.89
HPR1YDR138W YLR118CQ12354 227 aa3.27□□□□□ -1.89
HPR1YDR138W TAH1P25638 111 aaPredicted RBP3.27□□□□□ -1.89
HPR1YDR138W SRB6P32570 121 aa3.27□□□□□ -1.89
HPR1YDR138W TRS20P38334 175 aa3.27□□□□□ -1.89
HPR1YDR138W ECM14P38836 430 aa3.27□□□□□ -1.89
HPR1YDR138W PRM8P53174 237 aa3.27□□□□□ -1.89
HPR1YDR138W RNH201P53942 307 aa3.27□□□□□ -1.89
HPR1YDR138W CAT8P39113 1433 aa3.26□□□□□ -1.89
HPR1YDR138W PHO85P17157 305 aa3.26□□□□□ -1.89
HPR1YDR138W IMP1P28627 190 aa3.26□□□□□ -1.89
HPR1YDR138W TKL2P33315 681 aa3.26□□□□□ -1.89
HPR1YDR138W ZRT3P34240 503 aa3.26□□□□□ -1.89
HPR1YDR138W YBL081WP38180 368 aaKnown RBP3.26□□□□□ -1.89
HPR1YDR138W YBR013CP38215 129 aa3.26□□□□□ -1.89
HPR1YDR138W ARN2P38724 620 aa3.26□□□□□ -1.89
HPR1YDR138W HPA3P39979 161 aa3.26□□□□□ -1.89
HPR1YDR138W IGD1P43598 195 aa3.26□□□□□ -1.89
HPR1YDR138W MRH4P53166 561 aa3.26□□□□□ -1.89
HPR1YDR138W YPL067CQ02754 198 aa3.26□□□□□ -1.89
HPR1YDR138W ATG5Q12380 294 aa3.26□□□□□ -1.89
HPR1YDR138W YBL112CQ3E7Y4 105 aa3.26□□□□□ -1.89
HPR1YDR138W SPT6P23615 1451 aaKnown RBP3.26□□□□□ -1.89
HPR1YDR138W TY1B-BRQ12193 1756 aa3.26□□□□□ -1.89
HPR1YDR138W OAC1P32332 324 aa3.26□□□□□ -1.89
HPR1YDR138W SSS1P35179 80 aa3.26□□□□□ -1.89
HPR1YDR138W GGC1P38988 300 aa3.26□□□□□ -1.89
HPR1YDR138W YER189WP40104 122 aa3.26□□□□□ -1.89
HPR1YDR138W COF1Q03048 143 aaKnown RBP3.26□□□□□ -1.89
HPR1YDR138W INM2Q05533 292 aa3.26□□□□□ -1.89
HPR1YDR138W YLR030WQ07967 263 aa3.26□□□□□ -1.89
HPR1YDR138W YOL024WQ08172 172 aa3.26□□□□□ -1.89
HPR1YDR138W RRG7Q08774 242 aaPredicted RBP3.26□□□□□ -1.89
HPR1YDR138W MHT1Q12525 324 aa3.26□□□□□ -1.89
HPR1YDR138W PDR10P51533 1564 aa3.25□□□□□ -1.89
HPR1YDR138W YMR316C-AI2HB70 103 aa3.25□□□□□ -1.89
HPR1YDR138W COX5BP00425 151 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms