RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	ASP3-3	P0CX78	362 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	ASP3-4	P0CX79	362 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	ASP3-1	P0CZ17	362 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	ANB1	P19211	157 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	COT1	P32798	439 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	PFS1	P38872	237 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	IRC22	P40006	225 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	AVT7	P40501	490 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	OST3	P48439	350 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	BNS1	P50084	137 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	FLC3	P53121	802 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	CTF19	Q02732	369 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	GMC1	Q04399	608 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	FCF2	Q12035	217 aa	Predicted RBP	4.88	□□□□□ -1.63
TRP1	YDR007W	BTS1	Q12051	335 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	ERP3	Q12403	225 aa		4.88	□□□□□ -1.63
TRP1	YDR007W	PRP46	Q12417	451 aa	Predicted RBP	4.88	□□□□□ -1.63
TRP1	YDR007W	SEC22	P22214	214 aa		4.87	□□□□□ -1.63
TRP1	YDR007W	PRY2	P36110	329 aa		4.87	□□□□□ -1.63
TRP1	YDR007W	YPC1	P38298	316 aa		4.87	□□□□□ -1.63
TRP1	YDR007W	TRS20	P38334	175 aa		4.87	□□□□□ -1.63
TRP1	YDR007W	CHL4	P38907	458 aa		4.87	□□□□□ -1.63
TRP1	YDR007W	PFS2	P42841	465 aa	Known RBP	4.87	□□□□□ -1.63
TRP1	YDR007W	PEX31	P53203	462 aa		4.87	□□□□□ -1.63
TRP1	YDR007W	CGI121	Q03705	181 aa	Known RBP	4.87	□□□□□ -1.63
TRP1	YDR007W	YML018C	Q03730	393 aa		4.87	□□□□□ -1.63
TRP1	YDR007W	FSH2	Q05015	223 aa		4.87	□□□□□ -1.63
TRP1	YDR007W	RNH202	Q05635	350 aa		4.87	□□□□□ -1.63
TRP1	YDR007W	PAU23	Q07987	124 aa		4.87	□□□□□ -1.63
TRP1	YDR007W	YLR118C	Q12354	227 aa		4.87	□□□□□ -1.63
TRP1	YDR007W	JLP1	Q12358	412 aa		4.87	□□□□□ -1.63
TRP1	YDR007W	PAU17	Q12370	124 aa		4.87	□□□□□ -1.63
TRP1	YDR007W	YLR422W	Q06409	1932 aa		4.86	□□□□□ -1.63
TRP1	YDR007W	COX2	P00410	251 aa		4.86	□□□□□ -1.63
TRP1	YDR007W	PAU19	P0CE85	124 aa		4.86	□□□□□ -1.63
TRP1	YDR007W	PAU21	P0CE86	164 aa		4.86	□□□□□ -1.63
TRP1	YDR007W	PAU22	P0CE87	164 aa		4.86	□□□□□ -1.63
TRP1	YDR007W	PAU3	P25610	124 aa		4.86	□□□□□ -1.63
TRP1	YDR007W	ATG15	P25641	520 aa		4.86	□□□□□ -1.63
TRP1	YDR007W	YHL044W	P38727	235 aa		4.86	□□□□□ -1.63
TRP1	YDR007W	HTD2	P38790	280 aa	Known RBP	4.86	□□□□□ -1.63
TRP1	YDR007W	MIC26	P50087	233 aa		4.86	□□□□□ -1.63
TRP1	YDR007W	APJ1	P53940	528 aa		4.86	□□□□□ -1.63
TRP1	YDR007W	SPP2	Q02521	185 aa		4.86	□□□□□ -1.63
TRP1	YDR007W	YDR391C	Q04170	232 aa		4.86	□□□□□ -1.63
TRP1	YDR007W	ADH6	Q04894	360 aa	Known RBP	4.86	□□□□□ -1.63
TRP1	YDR007W	COQ10	Q08058	207 aa		4.86	□□□□□ -1.63
TRP1	YDR007W	MSW1	P04803	379 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	CTA1	P15202	515 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	CDC42	P19073	191 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	YSR3	P23501	404 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	PPH21	P23594	369 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	YOX1	P34161	385 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	BDH1	P39714	382 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	MPM1	P40364	252 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	DYN2	Q02647	92 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	ELC1	Q03071	99 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	RCE1	Q03530	315 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	GTO3	Q04806	366 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	SWC7	Q06707	132 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	YLR012C	Q07927	99 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	HUT1	Q12520	339 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	YPL247C	Q12523	523 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	IZH4	Q99393	312 aa		4.85	□□□□□ -1.63
TRP1	YDR007W	FIG2	P25653	1609 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	SAL1	D6W196	494 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	HIS1	P00498	297 aa	Known RBP	4.84	□□□□□ -1.63
TRP1	YDR007W	RAS2	P01120	322 aa	Known RBP	4.84	□□□□□ -1.63
TRP1	YDR007W	RPS14A	P06367	137 aa	Known RBP	4.84	□□□□□ -1.63
TRP1	YDR007W	YPR170W-B	P0C5R9	85 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	SCL1	P21243	252 aa	Known RBP	4.84	□□□□□ -1.63
TRP1	YDR007W	NTF2	P33331	125 aa	Known RBP	4.84	□□□□□ -1.63
TRP1	YDR007W	MRPS9	P38120	278 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	RPS14B	P39516	138 aa	Known RBP	4.84	□□□□□ -1.63
TRP1	YDR007W	HEM14	P40012	539 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	SPC25	P40014	221 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	YIL012W	P40551	113 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	THG1	P53215	237 aa	Known RBP	4.84	□□□□□ -1.63
TRP1	YDR007W	SUR7	P54003	302 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	MCH1	Q07376	486 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	RDL2	Q08742	149 aa	Known RBP	4.84	□□□□□ -1.63
TRP1	YDR007W	ATG41	Q12048	136 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	PER33	Q12144	273 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	YCT1	Q12235	531 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	PST1	Q12355	444 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	RPL13A	Q12690	199 aa	Predicted RBP	4.84	□□□□□ -1.63
TRP1	YDR007W	YIR021W-A	Q3E739	70 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	YKL018C-A	Q3E7A7	99 aa		4.84	□□□□□ -1.63
TRP1	YDR007W	PAI3	P01094	68 aa		4.83	□□□□□ -1.64
TRP1	YDR007W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
TRP1	YDR007W	KTI12	P34253	313 aa	Known RBP	4.83	□□□□□ -1.64
TRP1	YDR007W	SEC72	P39742	193 aa	Known RBP	4.83	□□□□□ -1.64
TRP1	YDR007W	OXA1	P39952	402 aa		4.83	□□□□□ -1.64
TRP1	YDR007W	SMB1	P40018	196 aa	Known RBP	4.83	□□□□□ -1.64
TRP1	YDR007W	MEP2	P41948	499 aa		4.83	□□□□□ -1.64
TRP1	YDR007W	UPS3	Q04006	179 aa		4.83	□□□□□ -1.64
TRP1	YDR007W	CTR3	Q06686	241 aa		4.83	□□□□□ -1.64
TRP1	YDR007W	FSF1	Q12029	327 aa	Known RBP	4.83	□□□□□ -1.64
TRP1	YDR007W	MCT1	Q12283	360 aa		4.83	□□□□□ -1.64
TRP1	YDR007W	CDC36	P06100	191 aa	Predicted RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms