RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W MGT1P26188 188 aa3.32□□□□□ -1.88
CKS1YBR135W NTF2P33331 125 aaKnown RBP3.32□□□□□ -1.88
CKS1YBR135W MRPL39P36533 70 aa3.32□□□□□ -1.88
CKS1YBR135W COG3P40094 801 aa3.32□□□□□ -1.88
CKS1YBR135W YJL016WP47072 561 aa3.32□□□□□ -1.88
CKS1YBR135W NSA1P53136 463 aaPredicted RBP3.32□□□□□ -1.88
CKS1YBR135W MMS2P53152 137 aa3.32□□□□□ -1.88
CKS1YBR135W GOT1Q03554 138 aa3.32□□□□□ -1.88
CKS1YBR135W SML1Q04964 104 aa3.32□□□□□ -1.88
CKS1YBR135W HEM25Q07534 307 aa3.32□□□□□ -1.88
CKS1YBR135W YNG1Q08465 219 aa3.32□□□□□ -1.88
CKS1YBR135W SYC1Q08553 188 aaPredicted RBP3.32□□□□□ -1.88
CKS1YBR135W FEX1Q08913 375 aa3.32□□□□□ -1.88
CKS1YBR135W FEX2Q08991 375 aa3.32□□□□□ -1.88
CKS1YBR135W GTT2Q12390 233 aa3.32□□□□□ -1.88
CKS1YBR135W HFA1P32874 2273 aa3.32□□□□□ -1.88
CKS1YBR135W MDM35O60200 86 aa3.31□□□□□ -1.88
CKS1YBR135W NSP1P14907 823 aaKnown RBP3.31□□□□□ -1.88
CKS1YBR135W GRE3P38715 327 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
CKS1YBR135W YHR127WP38833 243 aaKnown RBP3.31□□□□□ -1.88
CKS1YBR135W YER084WP40057 128 aa3.31□□□□□ -1.88
CKS1YBR135W IRC18P47056 224 aa3.31□□□□□ -1.88
CKS1YBR135W MDM34P53083 459 aa3.31□□□□□ -1.88
CKS1YBR135W NRK1P53915 240 aa3.31□□□□□ -1.88
CKS1YBR135W RPL22BP56628 122 aaKnown RBP3.31□□□□□ -1.88
CKS1YBR135W YPR011CQ12251 326 aa3.31□□□□□ -1.88
CKS1YBR135W IRA1P18963 3092 aa3.3□□□□□ -1.88
CKS1YBR135W PET54P10834 293 aa3.3□□□□□ -1.88
CKS1YBR135W KRE1P17260 313 aa3.3□□□□□ -1.88
CKS1YBR135W RNP1P32385 249 aa3.3□□□□□ -1.88
CKS1YBR135W MDH3P32419 343 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
CKS1YBR135W CLG1P35190 452 aa3.3□□□□□ -1.88
CKS1YBR135W UPS2P35200 230 aa3.3□□□□□ -1.88
CKS1YBR135W YCR087C-AP37263 153 aa3.3□□□□□ -1.88
CKS1YBR135W SSH1P38353 490 aaKnown RBP3.3□□□□□ -1.88
CKS1YBR135W MOG1P47123 218 aa3.3□□□□□ -1.88
CKS1YBR135W BRR6P53062 197 aa3.3□□□□□ -1.88
CKS1YBR135W RCF2P53721 224 aa3.3□□□□□ -1.88
CKS1YBR135W NUP49Q02199 472 aa3.3□□□□□ -1.88
CKS1YBR135W ABF2Q02486 183 aa3.3□□□□□ -1.88
CKS1YBR135W SEI1Q06058 285 aa3.3□□□□□ -1.88
CKS1YBR135W YOR186WQ08560 144 aa3.3□□□□□ -1.88
CKS1YBR135W PST1Q12355 444 aa3.3□□□□□ -1.88
CKS1YBR135W CMD1P06787 147 aaKnown RBP3.29□□□□□ -1.88
CKS1YBR135W GPA2P10823 449 aa3.29□□□□□ -1.88
CKS1YBR135W SPS18P32572 300 aa3.29□□□□□ -1.88
CKS1YBR135W CPR5P35176 225 aa3.29□□□□□ -1.88
CKS1YBR135W SDH4P37298 181 aa3.29□□□□□ -1.88
CKS1YBR135W PHB1P40961 287 aa3.29□□□□□ -1.88
CKS1YBR135W YGL088WP53151 121 aa3.29□□□□□ -1.88
CKS1YBR135W JAC1P53193 184 aa3.29□□□□□ -1.88
CKS1YBR135W FYV6P53913 173 aa3.29□□□□□ -1.88
CKS1YBR135W YNL046WP53956 172 aa3.29□□□□□ -1.88
CKS1YBR135W NOC4Q06512 552 aaPredicted RBP3.29□□□□□ -1.88
CKS1YBR135W YPD1Q07688 167 aa3.29□□□□□ -1.88
CKS1YBR135W RFU1Q08003 200 aa3.29□□□□□ -1.88
CKS1YBR135W SLD7Q08457 257 aa3.29□□□□□ -1.88
CKS1YBR135W YIL046W-AQ3E7Z4 54 aa3.29□□□□□ -1.88
CKS1YBR135W CSF1Q12150 2958 aa3.29□□□□□ -1.88
CKS1YBR135W BCY1P07278 416 aaKnown RBP3.28□□□□□ -1.88
CKS1YBR135W YCR099CP25657 155 aa3.28□□□□□ -1.88
CKS1YBR135W MIG1P27705 504 aa3.28□□□□□ -1.88
CKS1YBR135W UBC8P28263 218 aa3.28□□□□□ -1.88
CKS1YBR135W TCA17P32613 152 aa3.28□□□□□ -1.88
CKS1YBR135W YEL073CP39974 107 aa3.28□□□□□ -1.88
CKS1YBR135W YMR144WP40214 342 aaKnown RBP3.28□□□□□ -1.88
CKS1YBR135W YJL144WP47009 104 aa3.28□□□□□ -1.88
CKS1YBR135W APS3P47064 194 aa3.28□□□□□ -1.88
CKS1YBR135W TRM9P49957 279 aa3.28□□□□□ -1.88
CKS1YBR135W YOR268CQ08734 132 aa3.28□□□□□ -1.88
CKS1YBR135W YLR126CQ12288 251 aa3.28□□□□□ -1.88
CKS1YBR135W GEP5Q12393 293 aa3.28□□□□□ -1.88
CKS1YBR135W CDC8P00572 216 aa3.27□□□□□ -1.89
CKS1YBR135W SPT3P06844 337 aa3.27□□□□□ -1.89
CKS1YBR135W SEC22P22214 214 aa3.27□□□□□ -1.89
CKS1YBR135W MRPL49P40858 161 aaPredicted RBP3.27□□□□□ -1.89
CKS1YBR135W PIR5P46999 287 aa3.27□□□□□ -1.89
CKS1YBR135W YJR111CP47148 283 aaKnown RBP3.27□□□□□ -1.89
CKS1YBR135W COS6P53344 381 aa3.27□□□□□ -1.89
CKS1YBR135W PDR17P53844 350 aa3.27□□□□□ -1.89
CKS1YBR135W APJ1P53940 528 aa3.27□□□□□ -1.89
CKS1YBR135W COG5P53951 403 aa3.27□□□□□ -1.89
CKS1YBR135W NHP10Q03435 203 aa3.27□□□□□ -1.89
CKS1YBR135W HPT1Q04178 221 aaKnown RBP3.27□□□□□ -1.89
CKS1YBR135W YMR315WQ04869 349 aaKnown RBP3.27□□□□□ -1.89
CKS1YBR135W YPR127WQ06494 345 aa3.27□□□□□ -1.89
CKS1YBR135W YLR050CQ12155 161 aaKnown RBP3.27□□□□□ -1.89
CKS1YBR135W USB1Q12208 290 aaKnown RBP3.27□□□□□ -1.89
CKS1YBR135W GCN1P33892 2672 aaKnown RBP3.27□□□□□ -1.89
CKS1YBR135W PRP8P33334 2413 aaKnown RBP3.27□□□□□ -1.89
CKS1YBR135W NHP6AP11632 93 aaKnown RBP3.26□□□□□ -1.89
CKS1YBR135W TAH1P25638 111 aaPredicted RBP3.26□□□□□ -1.89
CKS1YBR135W MRPL28P36527 147 aa3.26□□□□□ -1.89
CKS1YBR135W YER076CP40049 302 aa3.26□□□□□ -1.89
CKS1YBR135W YER137CP40083 148 aaKnown RBP3.26□□□□□ -1.89
CKS1YBR135W YGR201CP42936 225 aa3.26□□□□□ -1.89
CKS1YBR135W BOL2P53082 120 aa3.26□□□□□ -1.89
CKS1YBR135W RSM10Q03201 203 aa3.26□□□□□ -1.89
CKS1YBR135W TRM12Q04235 462 aa3.26□□□□□ -1.89
CKS1YBR135W YLR179CQ06252 201 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms