RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C MRPL28P36527 147 aa1.45□□□□□ -2.18
SPC72YAL047C RPF1P38805 295 aaKnown RBP1.45□□□□□ -2.18
SPC72YAL047C EGD2P38879 174 aaKnown RBP1.45□□□□□ -2.18
SPC72YAL047C SEC72P39742 193 aaKnown RBP1.45□□□□□ -2.18
SPC72YAL047C LSM4P40070 187 aaKnown RBP1.45□□□□□ -2.18
SPC72YAL047C COG3P40094 801 aa1.45□□□□□ -2.18
SPC72YAL047C AIM25P47140 327 aa1.45□□□□□ -2.18
SPC72YAL047C ATG10Q07879 167 aa1.45□□□□□ -2.18
SPC72YAL047C YOL160WQ08321 113 aa1.45□□□□□ -2.18
SPC72YAL047C YNG1Q08465 219 aa1.45□□□□□ -2.18
SPC72YAL047C USB1Q12208 290 aaKnown RBP1.45□□□□□ -2.18
SPC72YAL047C YLR046CQ12253 270 aa1.45□□□□□ -2.18
SPC72YAL047C YOR020W-AQ3E824 90 aa1.45□□□□□ -2.18
SPC72YAL047C YHR032W-AP0C5N6 59 aa1.44□□□□□ -2.18
SPC72YAL047C RPL35AP0CX84 120 aaKnown RBP1.44□□□□□ -2.18
SPC72YAL047C RPL35BP0CX85 120 aaKnown RBP1.44□□□□□ -2.18
SPC72YAL047C TCA17P32613 152 aa1.44□□□□□ -2.18
SPC72YAL047C SDH4P37298 181 aa1.44□□□□□ -2.18
SPC72YAL047C ECM33P38248 429 aaKnown RBP1.44□□□□□ -2.18
SPC72YAL047C COS8P38723 381 aa1.44□□□□□ -2.18
SPC72YAL047C YAR068WP39564 161 aa1.44□□□□□ -2.18
SPC72YAL047C IRC22P40006 225 aa1.44□□□□□ -2.18
SPC72YAL047C YJL016WP47072 561 aa1.44□□□□□ -2.18
SPC72YAL047C YGL088WP53151 121 aa1.44□□□□□ -2.18
SPC72YAL047C SSU72P53538 206 aaPredicted RBP1.44□□□□□ -2.18
SPC72YAL047C LSM7P53905 115 aaKnown RBP1.44□□□□□ -2.18
SPC72YAL047C ABF2Q02486 183 aa1.44□□□□□ -2.18
SPC72YAL047C GAS3Q03655 524 aa1.44□□□□□ -2.18
SPC72YAL047C YMD8Q03697 442 aa1.44□□□□□ -2.18
SPC72YAL047C LPP1Q04396 274 aa1.44□□□□□ -2.18
SPC72YAL047C SPG3Q04398 127 aaPredicted RBP1.44□□□□□ -2.18
SPC72YAL047C GIM5Q04493 163 aa1.44□□□□□ -2.18
SPC72YAL047C ATG39Q06159 398 aa1.44□□□□□ -2.18
SPC72YAL047C FEX1Q08913 375 aa1.44□□□□□ -2.18
SPC72YAL047C FEX2Q08991 375 aa1.44□□□□□ -2.18
SPC72YAL047C VPS68Q12016 184 aa1.44□□□□□ -2.18
SPC72YAL047C LSO2Q3E772 92 aaKnown RBP1.44□□□□□ -2.18
SPC72YAL047C MRS1P07266 363 aa1.43□□□□□ -2.18
SPC72YAL047C FBA1P14540 359 aaKnown RBP1.43□□□□□ -2.18
SPC72YAL047C SNF6P18888 332 aa1.43□□□□□ -2.18
SPC72YAL047C MIG1P27705 504 aa1.43□□□□□ -2.18
SPC72YAL047C YBR063CP38083 404 aa1.43□□□□□ -2.18
SPC72YAL047C YHR125WP38831 101 aa1.43□□□□□ -2.18
SPC72YAL047C OST2P46964 130 aa1.43□□□□□ -2.18
SPC72YAL047C YJR056CP47115 236 aa1.43□□□□□ -2.18
SPC72YAL047C YJR141WP47172 347 aaPredicted RBP1.43□□□□□ -2.18
SPC72YAL047C CAB4P53332 305 aa1.43□□□□□ -2.18
SPC72YAL047C PIR1Q03178 341 aa1.43□□□□□ -2.18
SPC72YAL047C YPR114WQ06107 315 aa1.43□□□□□ -2.18
SPC72YAL047C NOC4Q06512 552 aaPredicted RBP1.43□□□□□ -2.18
SPC72YAL047C AKR2Q12013 749 aa1.43□□□□□ -2.18
SPC72YAL047C MDM32Q12171 622 aa1.43□□□□□ -2.18
SPC72YAL047C CMC2Q3E7A4 109 aa1.43□□□□□ -2.18
SPC72YAL047C TDA8Q6B2U8 126 aa1.43□□□□□ -2.18
SPC72YAL047C CDC7P06243 507 aa1.43□□□□□ -2.18
SPC72YAL047C GCY1P14065 312 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
SPC72YAL047C KRE1P17260 313 aa1.43□□□□□ -2.18
SPC72YAL047C ARC19P33204 171 aaKnown RBP1.43□□□□□ -2.18
SPC72YAL047C YKR032WP36127 104 aa1.43□□□□□ -2.18
SPC72YAL047C CAF4P36130 643 aa1.43□□□□□ -2.18
SPC72YAL047C RMD6P39975 231 aa1.43□□□□□ -2.18
SPC72YAL047C YER188WP40103 239 aa1.43□□□□□ -2.18
SPC72YAL047C POG1P40473 351 aa1.43□□□□□ -2.18
SPC72YAL047C ARC15P40518 154 aaRIP-Chip data1.43□□□□□ -2.18not detected
SPC72YAL047C SMD3P43321 101 aaKnown RBP1.43□□□□□ -2.18
SPC72YAL047C YIP3P53633 176 aa1.43□□□□□ -2.18
SPC72YAL047C SNO1Q03144 224 aa1.43□□□□□ -2.18
SPC72YAL047C PEX12Q04370 399 aa1.43□□□□□ -2.18
SPC72YAL047C SAS5Q99314 248 aa1.43□□□□□ -2.18
SPC72YAL047C IGO2Q9P305 131 aa1.43□□□□□ -2.18
SPC72YAL047C Q0255P03881 472 aa1.42□□□□□ -2.18
SPC72YAL047C RPL25P04456 142 aaKnown RBP1.42□□□□□ -2.18
SPC72YAL047C ATG22P25568 528 aa1.42□□□□□ -2.18
SPC72YAL047C CTR2P38865 189 aa1.42□□□□□ -2.18
SPC72YAL047C YIL086CP40503 102 aa1.42□□□□□ -2.18
SPC72YAL047C MRPL49P40858 161 aaPredicted RBP1.42□□□□□ -2.18
SPC72YAL047C PHB1P40961 287 aa1.42□□□□□ -2.18
SPC72YAL047C EMC4P53073 190 aa1.42□□□□□ -2.18
SPC72YAL047C YGR050CP53231 118 aa1.42□□□□□ -2.18
SPC72YAL047C TIM8P57744 87 aa1.42□□□□□ -2.18
SPC72YAL047C DID2P69771 204 aa1.42□□□□□ -2.18
SPC72YAL047C MIX17Q03667 156 aa1.42□□□□□ -2.18
SPC72YAL047C YML108WQ03759 105 aa1.42□□□□□ -2.18
SPC72YAL047C GRX8Q05926 109 aa1.42□□□□□ -2.18
SPC72YAL047C GGA1Q06336 557 aa1.42□□□□□ -2.18
SPC72YAL047C YPL162CQ12042 273 aa1.42□□□□□ -2.18
SPC72YAL047C PEX11Q12462 236 aa1.42□□□□□ -2.18
SPC72YAL047C AST2P39945 430 aaKnown RBP1.41□□□□□ -2.18
SPC72YAL047C NRK1P53915 240 aa1.41□□□□□ -2.18
SPC72YAL047C PRM15Q03262 622 aa1.41□□□□□ -2.18
SPC72YAL047C ARO80Q04052 950 aa1.41□□□□□ -2.18
SPC72YAL047C TRM12Q04235 462 aa1.41□□□□□ -2.18
SPC72YAL047C YFR032C-BQ8TGU2 87 aa1.41□□□□□ -2.18
SPC72YAL047C SIR2P06700 562 aa1.41□□□□□ -2.18
SPC72YAL047C ADH3P07246 375 aaKnown RBP1.41□□□□□ -2.18
SPC72YAL047C PUT1P09368 476 aa1.41□□□□□ -2.18
SPC72YAL047C YLR156WP0CE96 114 aa1.41□□□□□ -2.18
SPC72YAL047C YLR159WP0CE97 114 aa1.41□□□□□ -2.18
SPC72YAL047C YLR161WP0CE98 114 aa1.41□□□□□ -2.18
SPC72YAL047C UTP30P36144 274 aaKnown RBP1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms