RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W PDS1P40316 373 aaPredicted RBP1.76□□□□□ -2.13
VPS16YPL045W RPA43P46669 326 aa1.76□□□□□ -2.13
VPS16YPL045W YNL247WP53852 767 aaKnown RBP1.76□□□□□ -2.13
VPS16YPL045W DID2P69771 204 aa1.76□□□□□ -2.13
VPS16YPL045W SMD1Q02260 146 aaPredicted RBP1.76□□□□□ -2.13
VPS16YPL045W YML108WQ03759 105 aa1.76□□□□□ -2.13
VPS16YPL045W TSA2Q04120 196 aa1.76□□□□□ -2.13
VPS16YPL045W YMR315WQ04869 349 aaKnown RBP1.76□□□□□ -2.13
VPS16YPL045W NIP7Q08962 181 aaKnown RBP1.76□□□□□ -2.13
VPS16YPL045W MDM32Q12171 622 aa1.76□□□□□ -2.13
VPS16YPL045W PST1Q12355 444 aa1.76□□□□□ -2.13
VPS16YPL045W LSO2Q3E772 92 aaKnown RBP1.76□□□□□ -2.13
VPS16YPL045W HTL1Q9URQ5 78 aa1.76□□□□□ -2.13
VPS16YPL045W TRX3P25372 127 aa1.76□□□□□ -2.13
VPS16YPL045W ERG24P32462 438 aaKnown RBP1.76□□□□□ -2.13
VPS16YPL045W MAK5P38112 773 aaPredicted RBP1.76□□□□□ -2.13
VPS16YPL045W FIG1P38224 298 aa1.76□□□□□ -2.13
VPS16YPL045W DOG2P38773 246 aa1.76□□□□□ -2.13
VPS16YPL045W DOG1P38774 246 aa1.76□□□□□ -2.13
VPS16YPL045W SEO1P39709 593 aa1.76□□□□□ -2.13
VPS16YPL045W IRC22P40006 225 aa1.76□□□□□ -2.13
VPS16YPL045W UBC12P52491 188 aa1.76□□□□□ -2.13
VPS16YPL045W HAL1Q01766 294 aa1.76□□□□□ -2.13
VPS16YPL045W ABF2Q02486 183 aa1.76□□□□□ -2.13
VPS16YPL045W GRH1Q04410 372 aaKnown RBP1.76□□□□□ -2.13
VPS16YPL045W MCH1Q07376 486 aa1.76□□□□□ -2.13
VPS16YPL045W YLR036CQ07986 203 aa1.76□□□□□ -2.13
VPS16YPL045W YPL264CQ08980 353 aa1.76□□□□□ -2.13
VPS16YPL045W ISD11Q6Q560 94 aa1.76□□□□□ -2.13
VPS16YPL045W RPL25P04456 142 aaKnown RBP1.75□□□□□ -2.13
VPS16YPL045W HSP26P15992 214 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13 RIP-Chip
VPS16YPL045W BMH1P29311 267 aaKnown RBP1.75□□□□□ -2.13
VPS16YPL045W RNP1P32385 249 aa1.75□□□□□ -2.13
VPS16YPL045W CLG1P35190 452 aa1.75□□□□□ -2.13
VPS16YPL045W YER076CP40049 302 aa1.75□□□□□ -2.13
VPS16YPL045W COQ5P49017 307 aa1.75□□□□□ -2.13
VPS16YPL045W YGR050CP53231 118 aa1.75□□□□□ -2.13
VPS16YPL045W YNL184CP53876 108 aa1.75□□□□□ -2.13
VPS16YPL045W PIN3Q06449 215 aa1.75□□□□□ -2.13
VPS16YPL045W YOR283WQ12040 230 aaKnown RBP1.75□□□□□ -2.13
VPS16YPL045W PRR2Q12310 699 aa1.75□□□□□ -2.13
VPS16YPL045W UBR2Q07963 1872 aa1.75□□□□□ -2.13
VPS16YPL045W CDC7P06243 507 aa1.74□□□□□ -2.13
VPS16YPL045W DSF1P0CX08 502 aa1.74□□□□□ -2.13
VPS16YPL045W YNR073CP0CX09 502 aa1.74□□□□□ -2.13
VPS16YPL045W MGT1P26188 188 aa1.74□□□□□ -2.13
VPS16YPL045W MEI4P29467 408 aa1.74□□□□□ -2.13
VPS16YPL045W PTM1P32857 523 aa1.74□□□□□ -2.13
VPS16YPL045W RPF1P38805 295 aaKnown RBP1.74□□□□□ -2.13
VPS16YPL045W PRE5P40302 234 aaKnown RBP1.74□□□□□ -2.13
VPS16YPL045W YGL235WP53071 178 aa1.74□□□□□ -2.13
VPS16YPL045W RSM27P53305 110 aa1.74□□□□□ -2.13
VPS16YPL045W BRX1Q08235 291 aaKnown RBP1.74□□□□□ -2.13
VPS16YPL045W YPL257WQ08974 193 aa1.74□□□□□ -2.13
VPS16YPL045W GEP5Q12393 293 aa1.74□□□□□ -2.13
VPS16YPL045W NOT5Q12514 560 aaPredicted RBP1.74□□□□□ -2.13
VPS16YPL045W UTH1P36135 365 aa1.74□□□□□ -2.13
VPS16YPL045W COG5P53951 403 aa1.74□□□□□ -2.13
VPS16YPL045W YNL010WP53981 241 aaKnown RBP1.74□□□□□ -2.13
VPS16YPL045W YMD8Q03697 442 aa1.74□□□□□ -2.13
VPS16YPL045W PEX12Q04370 399 aa1.74□□□□□ -2.13
VPS16YPL045W LPP1Q04396 274 aa1.74□□□□□ -2.13
VPS16YPL045W YDL085C-AQ3E7B7 68 aaKnown RBP1.74□□□□□ -2.13
VPS16YPL045W YOR020W-AQ3E824 90 aa1.74□□□□□ -2.13
VPS16YPL045W TDA8Q6B2U8 126 aa1.74□□□□□ -2.13
VPS16YPL045W CUP2P15315 225 aa1.73□□□□□ -2.13
VPS16YPL045W YCR090CP25654 182 aaKnown RBP1.73□□□□□ -2.13
VPS16YPL045W ARO7P32178 256 aa1.73□□□□□ -2.13
VPS16YPL045W YOX1P34161 385 aa1.73□□□□□ -2.13
VPS16YPL045W YBR063CP38083 404 aa1.73□□□□□ -2.13
VPS16YPL045W OPY1P38271 328 aa1.73□□□□□ -2.13
VPS16YPL045W HMF1P40037 129 aaKnown RBP1.73□□□□□ -2.13
VPS16YPL045W FLC3P53121 802 aa1.73□□□□□ -2.13
VPS16YPL045W NUP49Q02199 472 aa1.73□□□□□ -2.13
VPS16YPL045W MRX8Q05473 314 aa1.73□□□□□ -2.13
VPS16YPL045W LAA1P39526 2014 aa1.73□□□□□ -2.13
VPS16YPL045W SIR2P06700 562 aa1.73□□□□□ -2.13
VPS16YPL045W SGA1P08019 549 aa1.73□□□□□ -2.13
VPS16YPL045W FCY2P17064 533 aa1.73□□□□□ -2.13
VPS16YPL045W MAK31P23059 88 aa1.73□□□□□ -2.13
VPS16YPL045W RCN1P36054 211 aa1.73□□□□□ -2.13
VPS16YPL045W TRR2P38816 342 aa1.73□□□□□ -2.13
VPS16YPL045W RMD6P39975 231 aa1.73□□□□□ -2.13
VPS16YPL045W YFR045WP43617 309 aa1.73□□□□□ -2.13
VPS16YPL045W RRP17Q04031 235 aaPredicted RBP1.73□□□□□ -2.13
VPS16YPL045W FCF1Q05498 189 aaPredicted RBP1.73□□□□□ -2.13
VPS16YPL045W YLR050CQ12155 161 aaKnown RBP1.73□□□□□ -2.13
VPS16YPL045W IES3Q12345 250 aa1.73□□□□□ -2.13
VPS16YPL045W BBP1Q12365 385 aa1.73□□□□□ -2.13
VPS16YPL045W YPR170W-BP0C5R9 85 aa1.72□□□□□ -2.13
VPS16YPL045W DPM1P14020 267 aaKnown RBP1.72□□□□□ -2.13
VPS16YPL045W CNB1P25296 175 aa1.72□□□□□ -2.13
VPS16YPL045W DER1P38307 211 aa1.72□□□□□ -2.13
VPS16YPL045W COS8P38723 381 aa1.72□□□□□ -2.13
VPS16YPL045W NVJ1P38881 321 aa1.72□□□□□ -2.13
VPS16YPL045W LSM4P40070 187 aaKnown RBP1.72□□□□□ -2.13
VPS16YPL045W MIG2P53035 382 aa1.72□□□□□ -2.13
VPS16YPL045W HST4P53688 370 aa1.72□□□□□ -2.13
VPS16YPL045W ALG9P53868 555 aaKnown RBP1.72□□□□□ -2.13
VPS16YPL045W RSM10Q03201 203 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms