RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	ISD11	Q6Q560	94 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	DET1	Q99288	334 aa	Known RBP	0.63	□□□□□ -2.31
PRP16	YKR086W	THP2	O13539	261 aa	Known RBP	0.62	□□□□□ -2.31
PRP16	YKR086W	COX2	P00410	251 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	RPL22A	P05749	121 aa	Known RBP	0.62	□□□□□ -2.31
PRP16	YKR086W	COS2	P0CX12	379 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	COS3	P0CX13	379 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	MDH2	P22133	377 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	PRE1	P22141	198 aa	Known RBP	0.62	□□□□□ -2.31
PRP16	YKR086W	YCR102C	P25608	368 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	AEP1	P32493	518 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	TKL2	P33315	681 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	ZRT3	P34240	503 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	COS4	P43542	379 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	FAR7	P43592	221 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	GEP7	P53171	287 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	BIO4	P53630	237 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	SWS2	P53937	143 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	YML018C	Q03730	393 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	YMR244W	Q04018	355 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	YMR253C	Q04835	414 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	HRT1	Q08273	121 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	YAL067W-A	Q8TGK6	75 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	RPL12A	P0CX53	165 aa	Known RBP	0.62	□□□□□ -2.31
PRP16	YKR086W	RPL12B	P0CX54	165 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	MATALPHA1	P0CY06	175 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	HMLALPHA1	P0CY07	175 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	MIR1	P23641	311 aa	Known RBP	0.62	□□□□□ -2.31
PRP16	YKR086W	YCR090C	P25654	182 aa	Known RBP	0.62	□□□□□ -2.31
PRP16	YKR086W	FAA1	P30624	700 aa	Known RBP	0.62	□□□□□ -2.31
PRP16	YKR086W	CSG2	P35206	410 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	SRX1	P36077	127 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	MRPL3	P36516	390 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	BDH1	P39714	382 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	SFM1	Q12314	213 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	DGK1	Q12382	290 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	AGC1	Q12482	902 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	HUT1	Q12520	339 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	LSO2	Q3E772	92 aa	Known RBP	0.62	□□□□□ -2.31
PRP16	YKR086W	TDA8	Q6B2U8	126 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	IRA1	P18963	3092 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	RHO1	P06780	209 aa	Known RBP	0.62	□□□□□ -2.31
PRP16	YKR086W	DSF1	P0CX08	502 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	YNR073C	P0CX09	502 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	CKA2	P19454	339 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	DBF2	P22204	572 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	MRS4	P23500	304 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	ERG24	P32462	438 aa	Known RBP	0.62	□□□□□ -2.31
PRP16	YKR086W	GCG1	P32656	232 aa	Known RBP	0.62	□□□□□ -2.31
PRP16	YKR086W	SHE1	P38200	338 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	YHL037C	P38733	133 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	MTW1	P39731	289 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	SLM1	P40485	686 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	AVT7	P40501	490 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	LSB1	P53281	241 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	RDL2	Q08742	149 aa	Known RBP	0.62	□□□□□ -2.31
PRP16	YKR086W	SLO1	Q3E784	85 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	YPL229W	Q99395	206 aa		0.62	□□□□□ -2.31
PRP16	YKR086W	RAD6	P06104	172 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	QCR8	P08525	94 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	SNF4	P12904	322 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	GCN3	P14741	305 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	CUP2	P15315	225 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	VMA6	P32366	345 aa	Known RBP	0.61	□□□□□ -2.31
PRP16	YKR086W	YBL010C	P32788	280 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	MRPS5	P33759	307 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	POP7	P38291	140 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	YPC1	P38298	316 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	RIB4	P50861	169 aa	Predicted RBP	0.61	□□□□□ -2.31
PRP16	YKR086W	YGL204C	P53089	101 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	NEJ1	Q06148	342 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	PEX30	Q06169	523 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	YOS9	Q99220	542 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	MSW1	P04803	379 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	NHP6A	P11632	93 aa	Known RBP	0.61	□□□□□ -2.31
PRP16	YKR086W	URA6	P15700	204 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	YCL042W	P25572	119 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	MIG1	P27705	504 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	QRI5	P32344	111 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	EDC3	P39998	551 aa	Known RBP	0.61	□□□□□ -2.31
PRP16	YKR086W	SER33	P40510	469 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	TDA4	P47153	279 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	YGR015C	P53208	328 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	RMI1	Q02685	241 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	RCE1	Q03530	315 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	MGR3	Q04472	501 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	CSM3	Q04659	317 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	AKR2	Q12013	749 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	FRE8	Q12209	686 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	YOR020W-A	Q3E824	90 aa		0.61	□□□□□ -2.31
PRP16	YKR086W	CDC28	P00546	298 aa	Known RBP	0.6	□□□□□ -2.31
PRP16	YKR086W	REP2	P03872	296 aa		0.6	□□□□□ -2.31
PRP16	YKR086W	CDC33	P07260	213 aa	Known RBP	0.6	□□□□□ -2.31
PRP16	YKR086W	UTR5	P32630	166 aa		0.6	□□□□□ -2.31
PRP16	YKR086W	PHO88	P38264	188 aa	Predicted RBP	0.6	□□□□□ -2.31
PRP16	YKR086W	SHE3	P38272	425 aa	Known RBP	0.6	□□□□□ -2.31
PRP16	YKR086W	CAT5	P41735	233 aa		0.6	□□□□□ -2.31
PRP16	YKR086W	EFM3	P47163	339 aa		0.6	□□□□□ -2.31
PRP16	YKR086W	SOL1	P50278	321 aa		0.6	□□□□□ -2.31
PRP16	YKR086W	EMC4	P53073	190 aa		0.6	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 207.4 ms