RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W YMR31P19955 123 aa8.2□□□□□ -1.1
UBA4YHR111W GTF1P53260 183 aaPredicted RBP8.2□□□□□ -1.1
UBA4YHR111W BOL1Q3E793 110 aa8.2□□□□□ -1.1
UBA4YHR111W SRY1P36007 326 aa8.19□□□□□ -1.1
UBA4YHR111W COS8P38723 381 aa8.19□□□□□ -1.1
UBA4YHR111W AGE2P40529 298 aa8.19□□□□□ -1.1
UBA4YHR111W CAB5Q03941 241 aa8.19□□□□□ -1.1
UBA4YHR111W THI74Q04083 370 aa8.19□□□□□ -1.1
UBA4YHR111W VBA1Q04301 562 aa8.19□□□□□ -1.1
UBA4YHR111W SPG4Q04438 115 aa8.19□□□□□ -1.1
UBA4YHR111W HRD1Q08109 551 aa8.19□□□□□ -1.1
UBA4YHR111W ISU2Q12056 156 aa8.19□□□□□ -1.1
UBA4YHR111W AEP3Q12089 606 aa8.19□□□□□ -1.1
UBA4YHR111W RNA14P25298 677 aaKnown RBP8.18□□□□□ -1.1
UBA4YHR111W MRPL13Q02204 264 aa8.18□□□□□ -1.1
UBA4YHR111W RTT103Q05543 409 aa8.18□□□□□ -1.1
UBA4YHR111W MCH1Q07376 486 aa8.18□□□□□ -1.1
UBA4YHR111W RDI1Q12434 202 aa8.18□□□□□ -1.1
UBA4YHR111W ILV5P06168 395 aaKnown RBP8.17□□□□□ -1.1
UBA4YHR111W LAG1P38703 411 aa8.17□□□□□ -1.1
UBA4YHR111W WWM1P43582 211 aaKnown RBP8.17□□□□□ -1.1
UBA4YHR111W SMX3P54999 86 aaPredicted RBP8.17□□□□□ -1.1
UBA4YHR111W INO2P26798 304 aa8.16□□□□□ -1.1
UBA4YHR111W YHR138CP38841 114 aaPredicted RBP8.16□□□□□ -1.1
UBA4YHR111W YOL029CQ08187 201 aa8.16□□□□□ -1.1
UBA4YHR111W SPS2P08459 502 aa8.15□□□□□ -1.1
UBA4YHR111W PRS4P38063 326 aaPredicted RBP8.15□□□□□ -1.1
UBA4YHR111W IRC24P40580 263 aa8.15□□□□□ -1.1
UBA4YHR111W PEX10Q05568 337 aa8.15□□□□□ -1.1
UBA4YHR111W YDL086WQ07505 273 aa8.15□□□□□ -1.1
UBA4YHR111W VPS63O13549 108 aa8.14□□□□□ -1.11
UBA4YHR111W OLE1P21147 510 aaKnown RBP8.14□□□□□ -1.11
UBA4YHR111W PHM8P40025 321 aa8.14□□□□□ -1.11
UBA4YHR111W YKE4P40544 346 aa8.14□□□□□ -1.11
UBA4YHR111W FIP1P45976 327 aa8.14□□□□□ -1.11
UBA4YHR111W UBP8P50102 471 aa8.14□□□□□ -1.11
UBA4YHR111W GPG1P53130 126 aa8.14□□□□□ -1.11
UBA4YHR111W HTB1P02293 131 aaKnown RBP8.13□□□□□ -1.11
UBA4YHR111W NHP6BP11633 99 aaKnown RBP8.13□□□□□ -1.11
UBA4YHR111W YKR045CP36138 183 aa8.13□□□□□ -1.11
UBA4YHR111W MRPL3P36516 390 aa8.13□□□□□ -1.11
UBA4YHR111W QCR2P07257 368 aa8.12□□□□□ -1.11
UBA4YHR111W YCR016WP25617 290 aaKnown RBP8.12□□□□□ -1.11
UBA4YHR111W GPP2P40106 250 aaKnown RBP8.12□□□□□ -1.11
UBA4YHR111W VPS55P47111 140 aa8.12□□□□□ -1.11
UBA4YHR111W NIF3P53081 288 aa8.12□□□□□ -1.11
UBA4YHR111W ARO8P53090 500 aaKnown RBP8.12□□□□□ -1.11
UBA4YHR111W NDE2Q07500 545 aa8.12□□□□□ -1.11
UBA4YHR111W ENV7Q12003 364 aa8.12□□□□□ -1.11
UBA4YHR111W TRM13Q12383 476 aa8.12□□□□□ -1.11
UBA4YHR111W HBN1Q96VH4 193 aa8.12□□□□□ -1.11
UBA4YHR111W YKL075CP36083 450 aa8.11□□□□□ -1.11
UBA4YHR111W YJL213WP40896 331 aa8.11□□□□□ -1.11
UBA4YHR111W YJL163CP46996 555 aa8.11□□□□□ -1.11
UBA4YHR111W CRH1P53301 507 aa8.11□□□□□ -1.11
UBA4YHR111W HOR7Q05827 59 aa8.11□□□□□ -1.11
UBA4YHR111W FEX2Q08991 375 aa8.11□□□□□ -1.11
UBA4YHR111W ATP3P38077 311 aaKnown RBP8.1□□□□□ -1.11
UBA4YHR111W YBR242WP38331 238 aa8.1□□□□□ -1.11
UBA4YHR111W GEP4P38812 185 aa8.1□□□□□ -1.11
UBA4YHR111W LSM12P38828 187 aaKnown RBP8.1□□□□□ -1.11
UBA4YHR111W RPA43P46669 326 aa8.1□□□□□ -1.11
UBA4YHR111W PAM18Q07914 168 aa8.1□□□□□ -1.11
UBA4YHR111W MRPL23Q12487 163 aaPredicted RBP8.1□□□□□ -1.11
UBA4YHR111W NOP1P15646 327 aaKnown RBP8.09□□□□□ -1.11
UBA4YHR111W MRP17P28778 131 aa8.09□□□□□ -1.11
UBA4YHR111W FSH2Q05015 223 aa8.09□□□□□ -1.11
UBA4YHR111W YNG1Q08465 219 aa8.09□□□□□ -1.11
UBA4YHR111W ATG5Q12380 294 aa8.09□□□□□ -1.11
UBA4YHR111W ATG31Q12421 196 aa8.09□□□□□ -1.11
UBA4YHR111W YJR112W-AQ3E743 109 aa8.09□□□□□ -1.11
UBA4YHR111W YBR255C-AQ3E776 120 aa8.09□□□□□ -1.11
UBA4YHR111W ERV15P38312 142 aa8.08□□□□□ -1.12
UBA4YHR111W BFR1P38934 470 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12 RIP-Chip
UBA4YHR111W ARP3P47117 449 aaKnown RBP8.08□□□□□ -1.12
UBA4YHR111W YML122CQ03207 126 aa8.08□□□□□ -1.12
UBA4YHR111W FEX1Q08913 375 aa8.08□□□□□ -1.12
UBA4YHR111W YCT1Q12235 531 aa8.08□□□□□ -1.12
UBA4YHR111W LAS17Q12446 633 aa8.08□□□□□ -1.12
UBA4YHR111W SUA5P32579 426 aa8.07□□□□□ -1.12
UBA4YHR111W RFC2P40348 353 aa8.07□□□□□ -1.12
UBA4YHR111W VPS28Q02767 242 aa8.07□□□□□ -1.12
UBA4YHR111W TPI1P00942 248 aaKnown RBP8.06□□□□□ -1.12
UBA4YHR111W GLY1P37303 387 aaKnown RBP8.06□□□□□ -1.12
UBA4YHR111W LST8P41318 303 aa8.06□□□□□ -1.12
UBA4YHR111W MRPS16Q02608 121 aa8.06□□□□□ -1.12
UBA4YHR111W RKI1Q12189 258 aa8.06□□□□□ -1.12
UBA4YHR111W TFB5Q3E7C1 72 aaPredicted RBP8.06□□□□□ -1.12
UBA4YHR111W MIG1P27705 504 aa8.05□□□□□ -1.12
UBA4YHR111W RPD3P32561 433 aa8.05□□□□□ -1.12
UBA4YHR111W MRPL38P35996 138 aaPredicted RBP8.05□□□□□ -1.12
UBA4YHR111W DFG10P40526 253 aa8.05□□□□□ -1.12
UBA4YHR111W YJR012CP47087 207 aa8.05□□□□□ -1.12
UBA4YHR111W PBP4Q07362 185 aaKnown RBP8.05□□□□□ -1.12
UBA4YHR111W PRM4Q12498 284 aa8.05□□□□□ -1.12
UBA4YHR111W PUT1P09368 476 aa8.04□□□□□ -1.12
UBA4YHR111W STF2P16965 84 aa8.04□□□□□ -1.12
UBA4YHR111W MRS4P23500 304 aa8.04□□□□□ -1.12
UBA4YHR111W YBR184WP38299 523 aa8.04□□□□□ -1.12
UBA4YHR111W YPT31P38555 223 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms