RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W URA10P30402 227 aa4.45□□□□□ -1.7
PDE1YGL248W MBA1P38300 278 aa4.45□□□□□ -1.7
PDE1YGL248W LCB3P47013 409 aa4.45□□□□□ -1.7
PDE1YGL248W ERV29P53337 310 aa4.45□□□□□ -1.7
PDE1YGL248W AAH1P53909 347 aa4.45□□□□□ -1.7
PDE1YGL248W YNL010WP53981 241 aaKnown RBP4.45□□□□□ -1.7
PDE1YGL248W YBL112CQ3E7Y4 105 aa4.45□□□□□ -1.7
PDE1YGL248W REV3P14284 1504 aa4.45□□□□□ -1.7
PDE1YGL248W STE7P06784 515 aa4.44□□□□□ -1.7
PDE1YGL248W YER039C-AP0CD97 72 aa4.44□□□□□ -1.7
PDE1YGL248W TIR1P10863 254 aa4.44□□□□□ -1.7
PDE1YGL248W CKS1P20486 150 aaKnown RBP4.44□□□□□ -1.7
PDE1YGL248W PRE1P22141 198 aaKnown RBP4.44□□□□□ -1.7
PDE1YGL248W PRE5P40302 234 aaKnown RBP4.44□□□□□ -1.7
PDE1YGL248W YGR050CP53231 118 aa4.44□□□□□ -1.7
PDE1YGL248W YNL234WP53857 426 aa4.44□□□□□ -1.7
PDE1YGL248W ALG9P53868 555 aaKnown RBP4.44□□□□□ -1.7
PDE1YGL248W MSA1Q08471 629 aa4.44□□□□□ -1.7
PDE1YGL248W SNX3Q08826 162 aaKnown RBP4.44□□□□□ -1.7
PDE1YGL248W TRM3Q07527 1436 aa4.44□□□□□ -1.7
PDE1YGL248W RPS18AP0CX55 146 aaKnown RBP4.43□□□□□ -1.7
PDE1YGL248W RPS18BP0CX56 146 aaPredicted RBP4.43□□□□□ -1.7
PDE1YGL248W ANB1P19211 157 aa4.43□□□□□ -1.7
PDE1YGL248W SRP21P32342 167 aa4.43□□□□□ -1.7
PDE1YGL248W YEA6P39953 335 aa4.43□□□□□ -1.7
PDE1YGL248W AVT7P40501 490 aa4.43□□□□□ -1.7
PDE1YGL248W SNM1P40993 198 aa4.43□□□□□ -1.7
PDE1YGL248W YGL088WP53151 121 aa4.43□□□□□ -1.7
PDE1YGL248W APJ1P53940 528 aa4.43□□□□□ -1.7
PDE1YGL248W YNL033WP53964 284 aa4.43□□□□□ -1.7
PDE1YGL248W YNL019CP53975 284 aa4.43□□□□□ -1.7
PDE1YGL248W INP1Q03694 420 aa4.43□□□□□ -1.7
PDE1YGL248W SPC3Q12133 184 aa4.43□□□□□ -1.7
PDE1YGL248W SIP2P34164 415 aaKnown RBP4.42□□□□□ -1.7
PDE1YGL248W GPX1P36014 167 aa4.42□□□□□ -1.7
PDE1YGL248W RFS1P38234 210 aaKnown RBP4.42□□□□□ -1.7
PDE1YGL248W CAT5P41735 233 aa4.42□□□□□ -1.7
PDE1YGL248W RRT5P43607 289 aa4.42□□□□□ -1.7
PDE1YGL248W SFT1P43682 97 aa4.42□□□□□ -1.7
PDE1YGL248W GPI2P46961 280 aa4.42□□□□□ -1.7
PDE1YGL248W ARP3P47117 449 aaKnown RBP4.42□□□□□ -1.7
PDE1YGL248W COS10P52924 374 aa4.42□□□□□ -1.7
PDE1YGL248W TPC1P53257 314 aa4.42□□□□□ -1.7
PDE1YGL248W FMP41P53889 259 aaKnown RBP4.42□□□□□ -1.7
PDE1YGL248W YOR292CQ08743 309 aa4.42□□□□□ -1.7
PDE1YGL248W RDL1Q12305 139 aaKnown RBP4.42□□□□□ -1.7
PDE1YGL248W YLR412C-AQ3E742 68 aa4.42□□□□□ -1.7
PDE1YGL248W Q0255P03881 472 aa4.41□□□□□ -1.7
PDE1YGL248W SHB17P36136 271 aaKnown RBP4.41□□□□□ -1.7
PDE1YGL248W CSH1P38287 376 aa4.41□□□□□ -1.7
PDE1YGL248W AST2P39945 430 aaKnown RBP4.41□□□□□ -1.7
PDE1YGL248W YEL075CP39972 122 aa4.41□□□□□ -1.7
PDE1YGL248W YER189WP40104 122 aa4.41□□□□□ -1.7
PDE1YGL248W TTI2P47168 421 aa4.41□□□□□ -1.7
PDE1YGL248W YGL230CP53074 147 aa4.41□□□□□ -1.7
PDE1YGL248W DAD3P69850 94 aa4.41□□□□□ -1.7
PDE1YGL248W VHS1Q03785 461 aa4.41□□□□□ -1.7
PDE1YGL248W NAT3Q06504 195 aa4.41□□□□□ -1.7
PDE1YGL248W CSR2Q12734 1121 aa4.41□□□□□ -1.7
PDE1YGL248W YBL008W-AQ3E821 79 aa4.41□□□□□ -1.7
PDE1YGL248W TY1B-DR4Q07793 1604 aa4.4□□□□□ -1.7
PDE1YGL248W YLR462WO13556 202 aa4.4□□□□□ -1.71
PDE1YGL248W ETR1P38071 380 aa4.4□□□□□ -1.71
PDE1YGL248W FIS1P40515 155 aa4.4□□□□□ -1.71
PDE1YGL248W NSE4P43124 402 aa4.4□□□□□ -1.71
PDE1YGL248W VPS25P47142 202 aa4.4□□□□□ -1.71
PDE1YGL248W RNH202Q05635 350 aa4.4□□□□□ -1.71
PDE1YGL248W TIR4Q12218 487 aaPredicted RBP4.4□□□□□ -1.71
PDE1YGL248W TDA8Q6B2U8 126 aa4.4□□□□□ -1.71
PDE1YGL248W YHR139C-AO13536 103 aa4.39□□□□□ -1.71
PDE1YGL248W RPS14AP06367 137 aaKnown RBP4.39□□□□□ -1.71
PDE1YGL248W FMP46P36141 133 aaKnown RBP4.39□□□□□ -1.71
PDE1YGL248W YBR090CP38253 122 aa4.39□□□□□ -1.71
PDE1YGL248W TIM17P39515 158 aa4.39□□□□□ -1.71
PDE1YGL248W RPS14BP39516 138 aaKnown RBP4.39□□□□□ -1.71
PDE1YGL248W EDC2P40023 145 aaPredicted RBP4.39□□□□□ -1.71
PDE1YGL248W PRM5P40476 318 aa4.39□□□□□ -1.71
PDE1YGL248W FIP1P45976 327 aa4.39□□□□□ -1.71
PDE1YGL248W TDA4P47153 279 aa4.39□□□□□ -1.71
PDE1YGL248W SBH1P52870 82 aa4.39□□□□□ -1.71
PDE1YGL248W RSM27P53305 110 aa4.39□□□□□ -1.71
PDE1YGL248W TDA7P53882 636 aaPredicted RBP4.39□□□□□ -1.71
PDE1YGL248W YPL278CQ08990 100 aa4.39□□□□□ -1.71
PDE1YGL248W YPS3Q12303 508 aa4.39□□□□□ -1.71
PDE1YGL248W DGK1Q12382 290 aa4.39□□□□□ -1.71
PDE1YGL248W OCA6Q12454 224 aa4.39□□□□□ -1.71
PDE1YGL248W RPL15AP05748 204 aaKnown RBP4.38□□□□□ -1.71
PDE1YGL248W HYP2P23301 157 aaKnown RBP4.38□□□□□ -1.71
PDE1YGL248W YHR140WP38842 239 aa4.38□□□□□ -1.71
PDE1YGL248W PTI1P39927 425 aaPredicted RBP4.38□□□□□ -1.71
PDE1YGL248W YER181CP40097 107 aa4.38□□□□□ -1.71
PDE1YGL248W YIL024CP40543 189 aa4.38□□□□□ -1.71
PDE1YGL248W YJL213WP40896 331 aa4.38□□□□□ -1.71
PDE1YGL248W SDS23P53172 527 aa4.38□□□□□ -1.71
PDE1YGL248W RPL15BP54780 204 aaPredicted RBP4.38□□□□□ -1.71
PDE1YGL248W YKR005CQ02203 525 aa4.38□□□□□ -1.71
PDE1YGL248W ADD37Q03233 198 aa4.38□□□□□ -1.71
PDE1YGL248W FSH2Q05015 223 aa4.38□□□□□ -1.71
PDE1YGL248W MIM1Q08176 113 aa4.38□□□□□ -1.71
PDE1YGL248W HUT1Q12520 339 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms