RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W RSM27P53305 110 aa0.85□□□□□ -2.27
SMC1YFL008W DYN2Q02647 92 aa0.85□□□□□ -2.27
SMC1YFL008W YML018CQ03730 393 aa0.85□□□□□ -2.27
SMC1YFL008W CUE4Q04201 117 aaPredicted RBP0.85□□□□□ -2.27
SMC1YFL008W GMC1Q04399 608 aa0.85□□□□□ -2.27
SMC1YFL008W YMR253CQ04835 414 aa0.85□□□□□ -2.27
SMC1YFL008W YPR098CQ06089 161 aa0.85□□□□□ -2.27
SMC1YFL008W NOC4Q06512 552 aaPredicted RBP0.85□□□□□ -2.27
SMC1YFL008W SUE1Q06524 206 aa0.85□□□□□ -2.27
SMC1YFL008W MMT2Q08970 484 aa0.85□□□□□ -2.27
SMC1YFL008W YOR283WQ12040 230 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W POM33Q12164 279 aa0.85□□□□□ -2.27
SMC1YFL008W PAI3P01094 68 aa0.84□□□□□ -2.27
SMC1YFL008W MSF1P08425 469 aa0.84□□□□□ -2.27
SMC1YFL008W PBI2P0CT04 75 aaKnown RBP0.84□□□□□ -2.27
SMC1YFL008W URA6P15700 204 aa0.84□□□□□ -2.27
SMC1YFL008W SNF6P18888 332 aa0.84□□□□□ -2.27
SMC1YFL008W URA10P30402 227 aa0.84□□□□□ -2.27
SMC1YFL008W AEP1P32493 518 aa0.84□□□□□ -2.27
SMC1YFL008W ECM31P38122 312 aa0.84□□□□□ -2.27
SMC1YFL008W YBR292CP38357 123 aa0.84□□□□□ -2.27
SMC1YFL008W GRE3P38715 327 aaKnown RBP RIP-Chip data0.84□□□□□ -2.27not detected
SMC1YFL008W NVJ1P38881 321 aa0.84□□□□□ -2.27
SMC1YFL008W HSP10P38910 106 aa0.84□□□□□ -2.27
SMC1YFL008W GNA1P43577 159 aaPredicted RBP0.84□□□□□ -2.27
SMC1YFL008W SNN1P48232 102 aa0.84□□□□□ -2.27
SMC1YFL008W RAD17P48581 401 aa0.84□□□□□ -2.27
SMC1YFL008W NUP57P48837 541 aa0.84□□□□□ -2.27
SMC1YFL008W MIC26P50087 233 aa0.84□□□□□ -2.27
SMC1YFL008W CWC23P52868 283 aaPredicted RBP0.84□□□□□ -2.27
SMC1YFL008W MGA1P53050 456 aa0.84□□□□□ -2.27
SMC1YFL008W SDS23P53172 527 aa0.84□□□□□ -2.27
SMC1YFL008W PIB2P53191 635 aa0.84□□□□□ -2.27
SMC1YFL008W TIM13P53299 105 aa0.84□□□□□ -2.27
SMC1YFL008W MPA43P53583 542 aaPredicted RBP0.84□□□□□ -2.27
SMC1YFL008W PDR17P53844 350 aa0.84□□□□□ -2.27
SMC1YFL008W PDR16P53860 351 aaKnown RBP0.84□□□□□ -2.27
SMC1YFL008W LSM7P53905 115 aaKnown RBP0.84□□□□□ -2.27
SMC1YFL008W YLR460CP54007 376 aa0.84□□□□□ -2.27
SMC1YFL008W NUP49Q02199 472 aa0.84□□□□□ -2.27
SMC1YFL008W ELC1Q03071 99 aa0.84□□□□□ -2.27
SMC1YFL008W TRM12Q04235 462 aa0.84□□□□□ -2.27
SMC1YFL008W UTP15Q04305 513 aaKnown RBP0.84□□□□□ -2.27
SMC1YFL008W YDR124WQ04608 324 aa0.84□□□□□ -2.27
SMC1YFL008W MRX8Q05473 314 aa0.84□□□□□ -2.27
SMC1YFL008W ATG10Q07879 167 aa0.84□□□□□ -2.27
SMC1YFL008W SDO1Q07953 250 aaKnown RBP0.84□□□□□ -2.27
SMC1YFL008W YPQ1Q12010 308 aa0.84□□□□□ -2.27
SMC1YFL008W TPO4Q12256 659 aa0.84□□□□□ -2.27
SMC1YFL008W TFC7Q12415 435 aa0.84□□□□□ -2.27
SMC1YFL008W EAF3Q12432 401 aa0.84□□□□□ -2.27
SMC1YFL008W MRX4Q12467 430 aa0.84□□□□□ -2.27
SMC1YFL008W HUT1Q12520 339 aa0.84□□□□□ -2.27
SMC1YFL008W YIR021W-AQ3E739 70 aa0.84□□□□□ -2.27
SMC1YFL008W PCC1Q3E833 88 aa0.84□□□□□ -2.27
SMC1YFL008W PET20Q99373 253 aa0.84□□□□□ -2.27
SMC1YFL008W HTL1Q9URQ5 78 aa0.84□□□□□ -2.27
SMC1YFL008W CAR2P07991 424 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W RPS25BP0C0T4 108 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W TFS1P14306 219 aa0.84□□□□□ -2.28
SMC1YFL008W YCR101CP25607 182 aa0.84□□□□□ -2.28
SMC1YFL008W SUA7P29055 345 aaPredicted RBP0.84□□□□□ -2.28
SMC1YFL008W ACB1P31787 87 aa0.84□□□□□ -2.28
SMC1YFL008W SUA5P32579 426 aa0.84□□□□□ -2.28
SMC1YFL008W FMT1P32785 401 aa0.84□□□□□ -2.28
SMC1YFL008W MRPL6P32904 214 aa0.84□□□□□ -2.28
SMC1YFL008W SUI1P32911 108 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W YHR035WP38769 630 aa0.84□□□□□ -2.28
SMC1YFL008W GAA1P39012 614 aa0.84□□□□□ -2.28
SMC1YFL008W END3P39013 349 aa0.84□□□□□ -2.28
SMC1YFL008W SMB1P40018 196 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W RRT13P40042 185 aa0.84□□□□□ -2.28
SMC1YFL008W LYS12P40495 371 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W GLR1P41921 483 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W MRX5P47007 382 aa0.84□□□□□ -2.28
SMC1YFL008W GPI14P47088 403 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W XPT1P47165 209 aa0.84□□□□□ -2.28
SMC1YFL008W YJR149WP47177 404 aa0.84□□□□□ -2.28
SMC1YFL008W DOC1P53068 250 aa0.84□□□□□ -2.28
SMC1YFL008W YNL140CP53910 189 aa0.84□□□□□ -2.28
SMC1YFL008W RCE1Q03530 315 aa0.84□□□□□ -2.28
SMC1YFL008W SMP3Q04174 516 aa0.84□□□□□ -2.28
SMC1YFL008W API2Q04413 109 aa0.84□□□□□ -2.28
SMC1YFL008W YPR114WQ06107 315 aa0.84□□□□□ -2.28
SMC1YFL008W YLR413WQ06689 675 aa0.84□□□□□ -2.28
SMC1YFL008W YOL019WQ08157 551 aa0.84□□□□□ -2.28
SMC1YFL008W RRT8Q08219 342 aa0.84□□□□□ -2.28
SMC1YFL008W YPL245WQ12179 454 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W YPS3Q12303 508 aa0.84□□□□□ -2.28
SMC1YFL008W GTT2Q12390 233 aa0.84□□□□□ -2.28
SMC1YFL008W PFK27Q12471 397 aaPredicted RBP0.84□□□□□ -2.28
SMC1YFL008W PSF1Q12488 208 aa0.84□□□□□ -2.28
SMC1YFL008W RPS25AQ3E792 108 aaPredicted RBP0.84□□□□□ -2.28
SMC1YFL008W ARG80P07249 177 aa0.84□□□□□ -2.28
SMC1YFL008W UBI4P0CG63 381 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W NHP6BP11633 99 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W GCY1P14065 312 aaKnown RBP RIP-Chip data0.84□□□□□ -2.28not detected
SMC1YFL008W BGL2P15703 313 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W MET16P18408 261 aaPredicted RBP0.84□□□□□ -2.28
SMC1YFL008W APA2P22108 325 aa0.84□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 101.5 ms