RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C MRX8Q05473 314 aa5.23□□□□□ -1.57
SHO1YER118C IRC25Q07951 179 aa5.23□□□□□ -1.57
SHO1YER118C YPL162CQ12042 273 aa5.23□□□□□ -1.57
SHO1YER118C ATP14Q12349 124 aa5.23□□□□□ -1.57
SHO1YER118C YCL021W-AQ96VH3 125 aa5.23□□□□□ -1.57
SHO1YER118C MYO4P32492 1471 aa5.22□□□□□ -1.57
SHO1YER118C KIN28P06242 306 aa5.22□□□□□ -1.57
SHO1YER118C RPA43P46669 326 aa5.22□□□□□ -1.57
SHO1YER118C BUD13P46947 266 aaPredicted RBP5.22□□□□□ -1.57
SHO1YER118C GPI14P47088 403 aaKnown RBP5.22□□□□□ -1.57
SHO1YER118C ORM1P53224 222 aa5.22□□□□□ -1.57
SHO1YER118C ARL3Q02804 198 aa5.22□□□□□ -1.57
SHO1YER118C YPL039WQ03080 316 aa5.22□□□□□ -1.57
SHO1YER118C YMR244WQ04018 355 aa5.22□□□□□ -1.57
SHO1YER118C THI74Q04083 370 aa5.22□□□□□ -1.57
SHO1YER118C NIP7Q08962 181 aaKnown RBP5.22□□□□□ -1.57
SHO1YER118C YER078W-AQ3E7A2 54 aa5.22□□□□□ -1.57
SHO1YER118C CKS1P20486 150 aaKnown RBP5.21□□□□□ -1.58
SHO1YER118C YCR043CP25361 127 aa5.21□□□□□ -1.58
SHO1YER118C STP22P25604 385 aa5.21□□□□□ -1.58
SHO1YER118C PTH1P38876 190 aaKnown RBP5.21□□□□□ -1.58
SHO1YER118C RFC2P40348 353 aa5.21□□□□□ -1.58
SHO1YER118C API2Q04413 109 aa5.21□□□□□ -1.58
SHO1YER118C YOR342CQ12182 319 aa5.21□□□□□ -1.58
SHO1YER118C YDL180WQ12301 547 aa5.21□□□□□ -1.58
SHO1YER118C ATG5Q12380 294 aa5.21□□□□□ -1.58
SHO1YER118C YOR020W-AQ3E824 90 aa5.21□□□□□ -1.58
SHO1YER118C BPT1P14772 1559 aa5.21□□□□□ -1.58
SHO1YER118C YLR462WO13556 202 aa5.2□□□□□ -1.58
SHO1YER118C YOR304C-AO14468 76 aa5.2□□□□□ -1.58
SHO1YER118C LDB16P25587 256 aa5.2□□□□□ -1.58
SHO1YER118C UTP30P36144 274 aaKnown RBP5.2□□□□□ -1.58
SHO1YER118C YBR063CP38083 404 aa5.2□□□□□ -1.58
SHO1YER118C CSH1P38287 376 aa5.2□□□□□ -1.58
SHO1YER118C RPF1P38805 295 aaKnown RBP5.2□□□□□ -1.58
SHO1YER118C YEL075CP39972 122 aa5.2□□□□□ -1.58
SHO1YER118C SNM1P40993 198 aa5.2□□□□□ -1.58
SHO1YER118C UFD1P53044 361 aa5.2□□□□□ -1.58
SHO1YER118C YGL088WP53151 121 aa5.2□□□□□ -1.58
SHO1YER118C ACT1P60010 375 aaKnown RBP5.2□□□□□ -1.58
SHO1YER118C COF1Q03048 143 aaKnown RBP5.2□□□□□ -1.58
SHO1YER118C PBA1Q05778 276 aa5.2□□□□□ -1.58
SHO1YER118C YBL112CQ3E7Y4 105 aa5.2□□□□□ -1.58
SHO1YER118C YFR032C-BQ8TGU2 87 aa5.2□□□□□ -1.58
SHO1YER118C SNT2P53127 1403 aa5.2□□□□□ -1.58
SHO1YER118C SEC17P32602 292 aa5.19□□□□□ -1.58
SHO1YER118C ZRT3P34240 503 aa5.19□□□□□ -1.58
SHO1YER118C MSA2P36157 363 aa5.19□□□□□ -1.58
SHO1YER118C DLS1P40366 167 aa5.19□□□□□ -1.58
SHO1YER118C SKI6P46948 246 aaPredicted RBP5.19□□□□□ -1.58
SHO1YER118C AKR2Q12013 749 aa5.19□□□□□ -1.58
SHO1YER118C DAS2Q12084 232 aa5.19□□□□□ -1.58
SHO1YER118C TY2B-LR1P0C2J3 1770 aa5.19□□□□□ -1.58
SHO1YER118C TY2B-FP0CX63 1770 aa5.19□□□□□ -1.58
SHO1YER118C TY2B-GR2P0CX64 1770 aa5.19□□□□□ -1.58
SHO1YER118C TY2B-CP25384 1770 aa5.19□□□□□ -1.58
SHO1YER118C TY2B-DR2Q03494 1770 aa5.19□□□□□ -1.58
SHO1YER118C TY1B-DR1Q03855 1755 aa5.19□□□□□ -1.58
SHO1YER118C TY2B-DR3Q07791 1770 aaKnown RBP5.19□□□□□ -1.58
SHO1YER118C TY2B-OR1Q12113 1770 aa5.19□□□□□ -1.58
SHO1YER118C TY2B-DR1Q12472 1770 aa5.19□□□□□ -1.58
SHO1YER118C TY2B-OR2Q12501 1770 aa5.19□□□□□ -1.58
SHO1YER118C Q0255P03881 472 aa5.18□□□□□ -1.58
SHO1YER118C RPL30P14120 105 aaKnown RBP5.18□□□□□ -1.58
SHO1YER118C RPC19P28000 142 aaKnown RBP5.18□□□□□ -1.58
SHO1YER118C TKL2P33315 681 aa5.18□□□□□ -1.58
SHO1YER118C ASK1P35734 292 aa5.18□□□□□ -1.58
SHO1YER118C TEM1P38987 245 aa5.18□□□□□ -1.58
SHO1YER118C YPL073CP40323 161 aa5.18□□□□□ -1.58
SHO1YER118C SYS1P41544 203 aa5.18□□□□□ -1.58
SHO1YER118C MIC19P43594 170 aa5.18□□□□□ -1.58
SHO1YER118C XPT1P47165 209 aa5.18□□□□□ -1.58
SHO1YER118C RUB1Q03919 77 aa5.18□□□□□ -1.58
SHO1YER118C CNL1Q06333 122 aa5.18□□□□□ -1.58
SHO1YER118C PRP11Q07350 266 aaPredicted RBP5.18□□□□□ -1.58
SHO1YER118C SLD7Q08457 257 aa5.18□□□□□ -1.58
SHO1YER118C YOR289WQ12012 251 aaPredicted RBP5.18□□□□□ -1.58
SHO1YER118C YPR170W-BP0C5R9 85 aa5.17□□□□□ -1.58
SHO1YER118C RPS1BP23248 255 aaKnown RBP5.17□□□□□ -1.58
SHO1YER118C TFC1P32367 649 aa5.17□□□□□ -1.58
SHO1YER118C UGX2P32772 223 aa5.17□□□□□ -1.58
SHO1YER118C VMA7P39111 118 aa5.17□□□□□ -1.58
SHO1YER118C ERJ5P43613 295 aaPredicted RBP5.17□□□□□ -1.58
SHO1YER118C OST2P46964 130 aa5.17□□□□□ -1.58
SHO1YER118C YGL118CP53132 145 aa5.17□□□□□ -1.58
SHO1YER118C YPL264CQ08980 353 aa5.17□□□□□ -1.58
SHO1YER118C TY1B-DR3Q99231 1755 aa5.16□□□□□ -1.58
SHO1YER118C ADH1P00330 348 aaKnown RBP5.16□□□□□ -1.58
SHO1YER118C MRP49P32388 137 aa5.16□□□□□ -1.58
SHO1YER118C YPT53P36019 220 aa5.16□□□□□ -1.58
SHO1YER118C MRPL24P36525 258 aaPredicted RBP5.16□□□□□ -1.58
SHO1YER118C YBL081WP38180 368 aaKnown RBP5.16□□□□□ -1.58
SHO1YER118C OPY1P38271 328 aa5.16□□□□□ -1.58
SHO1YER118C OM14P38325 134 aa5.16□□□□□ -1.58
SHO1YER118C POP4P38336 279 aa5.16□□□□□ -1.58
SHO1YER118C RPS20P38701 121 aaKnown RBP5.16□□□□□ -1.58
SHO1YER118C REE1P40893 198 aa5.16□□□□□ -1.58
SHO1YER118C TIM13P53299 105 aa5.16□□□□□ -1.58
SHO1YER118C CAB4P53332 305 aa5.16□□□□□ -1.58
SHO1YER118C BOR1P53838 576 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms