RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	CIN5	P40917	295 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	CCC1	P47818	322 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	LST7	P53237	242 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	PAU4	P53427	120 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	DAD3	P69850	94 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	ROT1	Q03691	256 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	YMR090W	Q04304	227 aa	Known RBP	3.77	□□□□□ -1.81
UPC2	YDR213W	PIN3	Q06449	215 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	YDL211C	Q12121	372 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	MCT1	Q12283	360 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	CDC39	P25655	2108 aa	Known RBP	3.77	□□□□□ -1.81
UPC2	YDR213W	RPL1A	P0CX43	217 aa	Known RBP	3.77	□□□□□ -1.81
UPC2	YDR213W	RPL1B	P0CX44	217 aa	Known RBP	3.77	□□□□□ -1.81
UPC2	YDR213W	NHP6A	P11632	93 aa	Known RBP	3.77	□□□□□ -1.81
UPC2	YDR213W	URA5	P13298	226 aa	Known RBP	3.77	□□□□□ -1.81
UPC2	YDR213W	ATP10	P18496	279 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	YCR025C	P25352	136 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	PEX4	P29340	183 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	SLM6	P38343	150 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	SUR2	P38992	349 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	YER134C	P40081	178 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	TRM9	P49957	279 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	HHT1	P61830	136 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	YPL039W	Q03080	316 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	TSA2	Q04120	196 aa		3.77	□□□□□ -1.81
UPC2	YDR213W	SNT309	Q06091	175 aa	Predicted RBP	3.77	□□□□□ -1.81
UPC2	YDR213W	TPT1	Q12272	230 aa	Known RBP	3.77	□□□□□ -1.81
UPC2	YDR213W	SEC16	P48415	2195 aa	Known RBP	3.76	□□□□□ -1.81
UPC2	YDR213W	MEK1	P24719	497 aa	Predicted RBP	3.76	□□□□□ -1.81
UPC2	YDR213W	RFA2	P26754	273 aa	Known RBP	3.76	□□□□□ -1.81
UPC2	YDR213W	SUA7	P29055	345 aa	Predicted RBP	3.76	□□□□□ -1.81
UPC2	YDR213W	TRM7	P38238	310 aa	Known RBP	3.76	□□□□□ -1.81
UPC2	YDR213W	RPP1	P38786	293 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	ATF1	P40353	525 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	YIL161W	P40449	235 aa	Known RBP	3.76	□□□□□ -1.81
UPC2	YDR213W	TPC1	P53257	314 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	RHO3	Q00245	231 aa	Known RBP	3.76	□□□□□ -1.81
UPC2	YDR213W	YMR082C	Q04276	118 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	QCR2	P07257	368 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	CTA1	P15202	515 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	RPB8	P20436	146 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	TRR1	P29509	319 aa	Known RBP	3.76	□□□□□ -1.81
UPC2	YDR213W	FLC3	P53121	802 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	PET191	Q02772	108 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	THI74	Q04083	370 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	YML096W	Q04489	525 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	ADH6	Q04894	360 aa	Known RBP	3.76	□□□□□ -1.81
UPC2	YDR213W	SEI1	Q06058	285 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	ATG10	Q07879	167 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	YLR030W	Q07967	263 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	YDL157C	Q12082	118 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	YLR050C	Q12155	161 aa	Known RBP	3.76	□□□□□ -1.81
UPC2	YDR213W	ISA2	Q12425	185 aa		3.76	□□□□□ -1.81
UPC2	YDR213W	OPI3	P05375	206 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	PPA2	P28239	310 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	TCA17	P32613	152 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	UTR5	P32630	166 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	PAM17	P36147	197 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	YBR220C	P38318	560 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	SCW4	P53334	386 aa	Known RBP	3.75	□□□□□ -1.81
UPC2	YDR213W	YNL184C	P53876	108 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	HRI1	Q05905	244 aa	Known RBP	3.75	□□□□□ -1.81
UPC2	YDR213W	YDR262W	Q12331	272 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	ACC1	Q00955	2233 aa	Known RBP	3.75	□□□□□ -1.81
UPC2	YDR213W	YPR170W-B	P0C5R9	85 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	GSP1	P32835	219 aa	Known RBP	3.75	□□□□□ -1.81
UPC2	YDR213W	GSP2	P32836	220 aa	Known RBP	3.75	□□□□□ -1.81
UPC2	YDR213W	MIX23	P38162	196 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	YBR292C	P38357	123 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	ANS1	P38832	159 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	PAC2	P39937	518 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	SMK1	P41808	388 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	SNO3	P43544	222 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	YJL028W	P47062	111 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	SNO2	P53823	222 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	RNH201	P53942	307 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	SMX3	P54999	86 aa	Predicted RBP	3.75	□□□□□ -1.81
UPC2	YDR213W	ARR3	Q06598	404 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	CSM4	Q08955	156 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	YLR111W	Q12528	110 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	SLO1	Q3E784	85 aa		3.75	□□□□□ -1.81
UPC2	YDR213W	BRR2	P32639	2163 aa	Known RBP	3.75	□□□□□ -1.81
UPC2	YDR213W	YSR3	P23501	404 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	SRB5	P32585	307 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	TAE1	P38340	232 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	ABM1	P47146	123 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	RPN14	P53196	417 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	STP3	Q05937	343 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	STP4	Q07351	490 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	LDS2	Q08218	356 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	FMP49	A0A023PZB3	126 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	DAL80	P26343	269 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	HMT1	P38074	348 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	DOG1	P38774	246 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	YFR054C	P43622	192 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	TTI2	P47168	421 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	YLR152C	P54072	576 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	RPL21A	Q02753	160 aa	Known RBP	3.74	□□□□□ -1.81
UPC2	YDR213W	COQ10	Q08058	207 aa		3.74	□□□□□ -1.81
UPC2	YDR213W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms