RNA–Protein interactions for RNA: YBR291C

CTP1, Transcript of Mitochondrial inner membrane citrate transporter, yeastyeast

Gene CTP1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTP1YBR291C YFR032C-BQ8TGU2 87 aa2.11□□□□□ -2.07
CTP1YBR291C FKS1P38631 1876 aaKnown RBP2.1□□□□□ -2.07
CTP1YBR291C MAG1P22134 296 aaKnown RBP2.1□□□□□ -2.07
CTP1YBR291C TAH1P25638 111 aaPredicted RBP2.1□□□□□ -2.07
CTP1YBR291C SKG1P36169 355 aa2.1□□□□□ -2.07
CTP1YBR291C SVP26P38869 228 aa2.1□□□□□ -2.07
CTP1YBR291C SRP14P38985 146 aa2.1□□□□□ -2.07
CTP1YBR291C AST2P39945 430 aaKnown RBP2.1□□□□□ -2.07
CTP1YBR291C UBC12P52491 188 aa2.1□□□□□ -2.07
CTP1YBR291C YNR062CP53748 327 aa2.1□□□□□ -2.07
CTP1YBR291C YLR460CP54007 376 aa2.1□□□□□ -2.07
CTP1YBR291C SWP1Q02795 286 aa2.1□□□□□ -2.07
CTP1YBR291C BRX1Q08235 291 aaKnown RBP2.1□□□□□ -2.07
CTP1YBR291C MDM32Q12171 622 aa2.1□□□□□ -2.07
CTP1YBR291C TSC3Q3E790 80 aa2.1□□□□□ -2.07
CTP1YBR291C YIL177CP40434 1758 aa2.09□□□□□ -2.07
CTP1YBR291C YJL225CP40889 1758 aa2.09□□□□□ -2.07
CTP1YBR291C TCB3Q03640 1545 aaKnown RBP2.09□□□□□ -2.07
CTP1YBR291C RAS2P01120 322 aaKnown RBP2.09□□□□□ -2.07
CTP1YBR291C PET9P18239 318 aaKnown RBP2.09□□□□□ -2.07
CTP1YBR291C YCR090CP25654 182 aaKnown RBP2.09□□□□□ -2.07
CTP1YBR291C CAF4P36130 643 aa2.09□□□□□ -2.07
CTP1YBR291C YER076CP40049 302 aa2.09□□□□□ -2.07
CTP1YBR291C RPL33BP41056 107 aaKnown RBP2.09□□□□□ -2.07
CTP1YBR291C YNL184CP53876 108 aa2.09□□□□□ -2.07
CTP1YBR291C YNL140CP53910 189 aa2.09□□□□□ -2.07
CTP1YBR291C YOL024WQ08172 172 aa2.09□□□□□ -2.07
CTP1YBR291C YPL162CQ12042 273 aa2.09□□□□□ -2.07
CTP1YBR291C YHR086W-AQ3E746 53 aa2.09□□□□□ -2.07
CTP1YBR291C TAF2P23255 1407 aa2.08□□□□□ -2.08
CTP1YBR291C RPL25P04456 142 aaKnown RBP2.08□□□□□ -2.08
CTP1YBR291C SIR2P06700 562 aa2.08□□□□□ -2.08
CTP1YBR291C DDI2P0CH63 225 aa2.08□□□□□ -2.08
CTP1YBR291C DDI3P0CH64 225 aa2.08□□□□□ -2.08
CTP1YBR291C MRPS28P21771 286 aa2.08□□□□□ -2.08
CTP1YBR291C MRPL17P36528 281 aa2.08□□□□□ -2.08
CTP1YBR291C SHG1P38337 142 aa2.08□□□□□ -2.08
CTP1YBR291C YHR022CP38763 256 aa2.08□□□□□ -2.08
CTP1YBR291C AYR1P40471 297 aa2.08□□□□□ -2.08
CTP1YBR291C COG5P53951 403 aa2.08□□□□□ -2.08
CTP1YBR291C YDR249CQ03787 373 aa2.08□□□□□ -2.08
CTP1YBR291C SPG3Q04398 127 aaPredicted RBP2.08□□□□□ -2.08
CTP1YBR291C MCP1Q12106 302 aa2.08□□□□□ -2.08
CTP1YBR291C SPT6P23615 1451 aaKnown RBP2.07□□□□□ -2.08
CTP1YBR291C TRX3P25372 127 aa2.07□□□□□ -2.08
CTP1YBR291C CLG1P35190 452 aa2.07□□□□□ -2.08
CTP1YBR291C UMP1P38293 148 aa2.07□□□□□ -2.08
CTP1YBR291C HMF1P40037 129 aaKnown RBP2.07□□□□□ -2.08
CTP1YBR291C PDS1P40316 373 aaPredicted RBP2.07□□□□□ -2.08
CTP1YBR291C TIR3P40552 269 aa2.07□□□□□ -2.08
CTP1YBR291C DOC1P53068 250 aa2.07□□□□□ -2.08
CTP1YBR291C CYT2Q00873 224 aa2.07□□□□□ -2.08
CTP1YBR291C YMR315WQ04869 349 aaKnown RBP2.07□□□□□ -2.08
CTP1YBR291C YET3Q07451 203 aa2.07□□□□□ -2.08
CTP1YBR291C XRN1P22147 1528 aaKnown RBP2.07□□□□□ -2.08
CTP1YBR291C HSL1P34244 1518 aa2.07□□□□□ -2.08
CTP1YBR291C TIM9O74700 87 aa2.06□□□□□ -2.08
CTP1YBR291C URA5P13298 226 aaKnown RBP2.06□□□□□ -2.08
CTP1YBR291C BET1P22804 142 aa2.06□□□□□ -2.08
CTP1YBR291C TRR1P29509 319 aaKnown RBP2.06□□□□□ -2.08
CTP1YBR291C DSE2P38844 325 aa2.06□□□□□ -2.08
CTP1YBR291C PEP8P40335 379 aa2.06□□□□□ -2.08
CTP1YBR291C JAC1P53193 184 aa2.06□□□□□ -2.08
CTP1YBR291C YNL247WP53852 767 aaKnown RBP2.06□□□□□ -2.08
CTP1YBR291C SKI3P17883 1432 aaKnown RBP2.06□□□□□ -2.08
CTP1YBR291C TY1B-DR4Q07793 1604 aa2.06□□□□□ -2.08
CTP1YBR291C MBF1O14467 151 aaKnown RBP2.05□□□□□ -2.08
CTP1YBR291C RPB3P16370 318 aaKnown RBP2.05□□□□□ -2.08
CTP1YBR291C MDH2P22133 377 aa2.05□□□□□ -2.08
CTP1YBR291C SNC2P33328 115 aa2.05□□□□□ -2.08
CTP1YBR291C VPS51P36116 164 aa2.05□□□□□ -2.08
CTP1YBR291C VTC1P40046 129 aaRIP-Chip data2.05□□□□□ -2.08not detected
CTP1YBR291C ARP3P47117 449 aaKnown RBP2.05□□□□□ -2.08
CTP1YBR291C BOL2P53082 120 aa2.05□□□□□ -2.08
CTP1YBR291C RTC4P53850 401 aa2.05□□□□□ -2.08
CTP1YBR291C YLR036CQ07986 203 aa2.05□□□□□ -2.08
CTP1YBR291C CNB1P25296 175 aa2.04□□□□□ -2.08
CTP1YBR291C ARO7P32178 256 aa2.04□□□□□ -2.08
CTP1YBR291C YET1P35723 206 aa2.04□□□□□ -2.08
CTP1YBR291C MAK5P38112 773 aaPredicted RBP2.04□□□□□ -2.08
CTP1YBR291C AGE2P40529 298 aa2.04□□□□□ -2.08
CTP1YBR291C GVP36P40531 326 aaKnown RBP2.04□□□□□ -2.08
CTP1YBR291C YJR111CP47148 283 aaKnown RBP2.04□□□□□ -2.08
CTP1YBR291C HIR3P47171 1648 aa2.04□□□□□ -2.08
CTP1YBR291C ARO8P53090 500 aaKnown RBP2.04□□□□□ -2.08
CTP1YBR291C EFM5P53200 248 aaKnown RBP2.04□□□□□ -2.08
CTP1YBR291C MMS22Q06164 1454 aa2.04□□□□□ -2.08
CTP1YBR291C FSF1Q12029 327 aaKnown RBP2.04□□□□□ -2.08
CTP1YBR291C ATP15P21306 62 aa2.03□□□□□ -2.08
CTP1YBR291C UBC6P33296 250 aaPredicted RBP2.03□□□□□ -2.08
CTP1YBR291C AME1P38313 324 aa2.03□□□□□ -2.08
CTP1YBR291C GLE2P40066 365 aa2.03□□□□□ -2.08
CTP1YBR291C YNL217WP40152 326 aa2.03□□□□□ -2.08
CTP1YBR291C BUD25P85052 153 aa2.03□□□□□ -2.08
CTP1YBR291C REV3P14284 1504 aa2.02□□□□□ -2.09
CTP1YBR291C RPS24AP0CX31 135 aaKnown RBP2.02□□□□□ -2.09
CTP1YBR291C RPS24BP0CX32 135 aaKnown RBP2.02□□□□□ -2.09
CTP1YBR291C CKS1P20486 150 aaKnown RBP2.02□□□□□ -2.09
CTP1YBR291C SHE2P36068 246 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
CTP1YBR291C FMP23P38231 175 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms