RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W HUT1Q12520 339 aa4.39□□□□□ -1.71
SIF2YBR103W FOL3Q12676 427 aaPredicted RBP4.39□□□□□ -1.71
SIF2YBR103W YIR021W-AQ3E739 70 aa4.39□□□□□ -1.71
SIF2YBR103W RPS25AQ3E792 108 aaPredicted RBP4.39□□□□□ -1.71
SIF2YBR103W NUM1Q00402 2748 aa4.38□□□□□ -1.71
SIF2YBR103W TFS1P14306 219 aa4.38□□□□□ -1.71
SIF2YBR103W RPB5P20434 215 aa4.38□□□□□ -1.71
SIF2YBR103W TRX3P25372 127 aa4.38□□□□□ -1.71
SIF2YBR103W POP5P28005 173 aa4.38□□□□□ -1.71
SIF2YBR103W UPS2P35200 230 aa4.38□□□□□ -1.71
SIF2YBR103W AZF1P41696 914 aa4.38□□□□□ -1.71
SIF2YBR103W YIF1P53845 314 aaKnown RBP4.38□□□□□ -1.71
SIF2YBR103W ACT1P60010 375 aaKnown RBP4.38□□□□□ -1.71
SIF2YBR103W TPS1Q00764 495 aaKnown RBP4.38□□□□□ -1.71
SIF2YBR103W SDH7Q04401 133 aa4.38□□□□□ -1.71
SIF2YBR103W MRPL35Q06678 367 aa4.38□□□□□ -1.71
SIF2YBR103W YKL033W-AQ86ZR7 236 aa4.38□□□□□ -1.71
SIF2YBR103W PRP8P33334 2413 aaKnown RBP4.37□□□□□ -1.71
SIF2YBR103W ILV5P06168 395 aaKnown RBP4.37□□□□□ -1.71
SIF2YBR103W YPR170W-BP0C5R9 85 aa4.37□□□□□ -1.71
SIF2YBR103W PAU19P0CE85 124 aa4.37□□□□□ -1.71
SIF2YBR103W PAU21P0CE86 164 aa4.37□□□□□ -1.71
SIF2YBR103W PAU22P0CE87 164 aa4.37□□□□□ -1.71
SIF2YBR103W YFL068WP0CX99 160 aa4.37□□□□□ -1.71
SIF2YBR103W YLL066W-AP0CY00 160 aa4.37□□□□□ -1.71
SIF2YBR103W YLL067W-AP0CY01 160 aa4.37□□□□□ -1.71
SIF2YBR103W PAU3P25610 124 aa4.37□□□□□ -1.71
SIF2YBR103W OAC1P32332 324 aa4.37□□□□□ -1.71
SIF2YBR103W NTF2P33331 125 aaKnown RBP4.37□□□□□ -1.71
SIF2YBR103W DAD2P36162 133 aa4.37□□□□□ -1.71
SIF2YBR103W HTD2P38790 280 aaKnown RBP4.37□□□□□ -1.71
SIF2YBR103W YIL012WP40551 113 aa4.37□□□□□ -1.71
SIF2YBR103W SGN1P40561 250 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
SIF2YBR103W CTK2P46962 323 aa4.37□□□□□ -1.71
SIF2YBR103W UBX6P47049 396 aa4.37□□□□□ -1.71
SIF2YBR103W ERG13P54839 491 aaKnown RBP4.37□□□□□ -1.71
SIF2YBR103W IRC15Q02733 499 aa4.37□□□□□ -1.71
SIF2YBR103W YPL077CQ02831 240 aa4.37□□□□□ -1.71
SIF2YBR103W MSS11Q03825 758 aa4.37□□□□□ -1.71
SIF2YBR103W RSF1Q05043 376 aa4.37□□□□□ -1.71
SIF2YBR103W YLR036CQ07986 203 aa4.37□□□□□ -1.71
SIF2YBR103W COQ10Q08058 207 aa4.37□□□□□ -1.71
SIF2YBR103W JLP1Q12358 412 aa4.37□□□□□ -1.71
SIF2YBR103W Q0010Q9ZZX9 128 aa4.37□□□□□ -1.71
SIF2YBR103W PHO2P07269 559 aa4.36□□□□□ -1.71
SIF2YBR103W PUT1P09368 476 aa4.36□□□□□ -1.71
SIF2YBR103W TIR1P10863 254 aa4.36□□□□□ -1.71
SIF2YBR103W CPR2P23285 205 aa4.36□□□□□ -1.71
SIF2YBR103W YMC1P32331 307 aa4.36□□□□□ -1.71
SIF2YBR103W CMC1P36064 111 aa4.36□□□□□ -1.71
SIF2YBR103W YKR073CP36153 106 aa4.36□□□□□ -1.71
SIF2YBR103W OMA1P36163 345 aa4.36□□□□□ -1.71
SIF2YBR103W CBP4P37267 147 aa4.36□□□□□ -1.71
SIF2YBR103W TRS20P38334 175 aa4.36□□□□□ -1.71
SIF2YBR103W YER085CP40058 173 aa4.36□□□□□ -1.71
SIF2YBR103W YER188WP40103 239 aa4.36□□□□□ -1.71
SIF2YBR103W YIL152WP40455 235 aa4.36□□□□□ -1.71
SIF2YBR103W YHC3P47040 408 aa4.36□□□□□ -1.71
SIF2YBR103W ATG4P53867 494 aa4.36□□□□□ -1.71
SIF2YBR103W PRP11Q07350 266 aaPredicted RBP4.36□□□□□ -1.71
SIF2YBR103W PRR2Q12310 699 aa4.36□□□□□ -1.71
SIF2YBR103W YLR361C-AQ3E795 98 aa4.36□□□□□ -1.71
SIF2YBR103W RAS2P01120 322 aaKnown RBP4.35□□□□□ -1.71
SIF2YBR103W SEC4P07560 215 aaKnown RBP4.35□□□□□ -1.71
SIF2YBR103W ATP10P18496 279 aa4.35□□□□□ -1.71
SIF2YBR103W LDB16P25587 256 aa4.35□□□□□ -1.71
SIF2YBR103W MCH2P36032 473 aa4.35□□□□□ -1.71
SIF2YBR103W PFS2P42841 465 aaKnown RBP4.35□□□□□ -1.71
SIF2YBR103W IKS1P47042 667 aa4.35□□□□□ -1.71
SIF2YBR103W YNL140CP53910 189 aa4.35□□□□□ -1.71
SIF2YBR103W APJ1P53940 528 aa4.35□□□□□ -1.71
SIF2YBR103W APS2Q00381 147 aa4.35□□□□□ -1.71
SIF2YBR103W YDR415CQ04033 374 aaPredicted RBP4.35□□□□□ -1.71
SIF2YBR103W YLR118CQ12354 227 aa4.35□□□□□ -1.71
SIF2YBR103W TFB5Q3E7C1 72 aaPredicted RBP4.35□□□□□ -1.71
SIF2YBR103W YCR075W-AQ3E830 75 aa4.35□□□□□ -1.71
SIF2YBR103W YCR023CP25351 611 aa4.35□□□□□ -1.71
SIF2YBR103W UTR5P32630 166 aa4.35□□□□□ -1.71
SIF2YBR103W UGX2P32772 223 aa4.35□□□□□ -1.71
SIF2YBR103W MIX23P38162 196 aa4.35□□□□□ -1.71
SIF2YBR103W YHR177WP38867 453 aa4.35□□□□□ -1.71
SIF2YBR103W YHR210CP38893 341 aa4.35□□□□□ -1.71
SIF2YBR103W SHO1P40073 367 aa4.35□□□□□ -1.71
SIF2YBR103W NSA2P40078 261 aaKnown RBP4.35□□□□□ -1.71
SIF2YBR103W AYR1P40471 297 aa4.35□□□□□ -1.71
SIF2YBR103W YJL163CP46996 555 aa4.35□□□□□ -1.71
SIF2YBR103W NIF3P53081 288 aa4.35□□□□□ -1.71
SIF2YBR103W YNL092WP53934 400 aa4.35□□□□□ -1.71
SIF2YBR103W YOL024WQ08172 172 aa4.35□□□□□ -1.71
SIF2YBR103W ATG41Q12048 136 aa4.35□□□□□ -1.71
SIF2YBR103W USV1Q12132 391 aa4.35□□□□□ -1.71
SIF2YBR103W RKI1Q12189 258 aa4.35□□□□□ -1.71
SIF2YBR103W AIM45Q12480 344 aaKnown RBP4.35□□□□□ -1.71
SIF2YBR103W YPR096CO13587 100 aa4.34□□□□□ -1.71
SIF2YBR103W COX1P00401 534 aa4.34□□□□□ -1.71
SIF2YBR103W RPS13P05756 151 aaKnown RBP4.34□□□□□ -1.71
SIF2YBR103W STE7P06784 515 aa4.34□□□□□ -1.71
SIF2YBR103W RPL27AP0C2H6 136 aaKnown RBP4.34□□□□□ -1.71
SIF2YBR103W RPL27BP0C2H7 136 aaKnown RBP4.34□□□□□ -1.71
SIF2YBR103W PUT3P25502 979 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms