RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM3	YBR030W	YLR161W	P0CE98	114 aa		3.17	□□□□□ -1.9
RKM3	YBR030W	TVP38	P36164	337 aa		3.17	□□□□□ -1.9
RKM3	YBR030W	RSM25	P40496	264 aa		3.17	□□□□□ -1.9
RKM3	YBR030W	YFR045W	P43617	309 aa		3.17	□□□□□ -1.9
RKM3	YBR030W	PGA1	P53896	198 aa		3.17	□□□□□ -1.9
RKM3	YBR030W	SWP1	Q02795	286 aa		3.17	□□□□□ -1.9
RKM3	YBR030W	MCP1	Q12106	302 aa		3.17	□□□□□ -1.9
RKM3	YBR030W	MPD1	Q12404	318 aa	Known RBP	3.17	□□□□□ -1.9
RKM3	YBR030W	RPB3	P16370	318 aa	Known RBP	3.17	□□□□□ -1.9
RKM3	YBR030W	YAP3	P38749	330 aa		3.17	□□□□□ -1.9
RKM3	YBR030W	GIM4	P40005	111 aa	Known RBP	3.17	□□□□□ -1.9
RKM3	YBR030W	PFS2	P42841	465 aa	Known RBP	3.17	□□□□□ -1.9
RKM3	YBR030W	APJ1	P53940	528 aa		3.17	□□□□□ -1.9
RKM3	YBR030W	REP2	P03872	296 aa		3.16	□□□□□ -1.9
RKM3	YBR030W	BUB2	P26448	306 aa	Predicted RBP	3.16	□□□□□ -1.9
RKM3	YBR030W	UTH1	P36135	365 aa		3.16	□□□□□ -1.9
RKM3	YBR030W	SKI6	P46948	246 aa	Predicted RBP	3.16	□□□□□ -1.9
RKM3	YBR030W	OST2	P46964	130 aa		3.16	□□□□□ -1.9
RKM3	YBR030W	YLR031W	Q07978	186 aa		3.16	□□□□□ -1.9
RKM3	YBR030W	PSF1	Q12488	208 aa		3.16	□□□□□ -1.9
RKM3	YBR030W	SKG1	P36169	355 aa		3.15	□□□□□ -1.9
RKM3	YBR030W	YHR125W	P38831	101 aa		3.15	□□□□□ -1.9
RKM3	YBR030W	PRE5	P40302	234 aa	Known RBP	3.15	□□□□□ -1.9
RKM3	YBR030W	YGR042W	P53227	271 aa		3.15	□□□□□ -1.9
RKM3	YBR030W	TRM12	Q04235	462 aa		3.15	□□□□□ -1.9
RKM3	YBR030W	YPR202W	Q08993	238 aa		3.15	□□□□□ -1.9
RKM3	YBR030W	RPL9A	P05738	191 aa	Known RBP	3.14	□□□□□ -1.91
RKM3	YBR030W	ADH3	P07246	375 aa	Known RBP	3.14	□□□□□ -1.91
RKM3	YBR030W	BET1	P22804	142 aa		3.14	□□□□□ -1.91
RKM3	YBR030W	UPS2	P35200	230 aa		3.14	□□□□□ -1.91
RKM3	YBR030W	SOL1	P50278	321 aa		3.14	□□□□□ -1.91
RKM3	YBR030W	RPL9B	P51401	191 aa	Known RBP	3.14	□□□□□ -1.91
RKM3	YBR030W	YLR046C	Q12253	270 aa		3.14	□□□□□ -1.91
RKM3	YBR030W	FKS1	P38631	1876 aa	Known RBP	3.14	□□□□□ -1.91
RKM3	YBR030W	YOR1	P53049	1477 aa		3.14	□□□□□ -1.91
RKM3	YBR030W	Q0255	P03881	472 aa		3.14	□□□□□ -1.91
RKM3	YBR030W	CKS1	P20486	150 aa	Known RBP	3.14	□□□□□ -1.91
RKM3	YBR030W	MED6	P38782	295 aa		3.14	□□□□□ -1.91
RKM3	YBR030W	CYC2	P38909	366 aa		3.14	□□□□□ -1.91
RKM3	YBR030W	ARC15	P40518	154 aa	RIP-Chip data	3.14	□□□□□ -1.91	not detected
RKM3	YBR030W	YFL012W	P43580	148 aa		3.14	□□□□□ -1.91
RKM3	YBR030W	GON7	P46984	123 aa		3.14	□□□□□ -1.91
RKM3	YBR030W	YPR014C	Q6B0W2	109 aa		3.14	□□□□□ -1.91
RKM3	YBR030W	PDR18	P53756	1333 aa		3.13	□□□□□ -1.91
RKM3	YBR030W	HIS3	P06633	220 aa		3.13	□□□□□ -1.91
RKM3	YBR030W	URA5	P13298	226 aa	Known RBP	3.13	□□□□□ -1.91
RKM3	YBR030W	MRPS28	P21771	286 aa		3.13	□□□□□ -1.91
RKM3	YBR030W	SPO13	P23624	291 aa		3.13	□□□□□ -1.91
RKM3	YBR030W	ECO1	P43605	281 aa		3.13	□□□□□ -1.91
RKM3	YBR030W	YGL204C	P53089	101 aa		3.13	□□□□□ -1.91
RKM3	YBR030W	TMA20	P89886	181 aa	Predicted RBP	3.13	□□□□□ -1.91
RKM3	YBR030W	IES4	Q08561	116 aa		3.13	□□□□□ -1.91
RKM3	YBR030W	SWR1	Q05471	1514 aa		3.12	□□□□□ -1.91
RKM3	YBR030W	ATP15	P21306	62 aa		3.12	□□□□□ -1.91
RKM3	YBR030W	IDP1	P21954	428 aa	Known RBP	3.12	□□□□□ -1.91
RKM3	YBR030W	CTR2	P38865	189 aa		3.12	□□□□□ -1.91
RKM3	YBR030W	YDR476C	Q03362	224 aa		3.12	□□□□□ -1.91
RKM3	YBR030W	YOR268C	Q08734	132 aa		3.12	□□□□□ -1.91
RKM3	YBR030W	TSC3	Q3E790	80 aa		3.12	□□□□□ -1.91
RKM3	YBR030W	CDC8	P00572	216 aa		3.11	□□□□□ -1.91
RKM3	YBR030W	UBI4	P0CG63	381 aa	Known RBP	3.11	□□□□□ -1.91
RKM3	YBR030W	OCH1	P31755	480 aa		3.11	□□□□□ -1.91
RKM3	YBR030W	TKL2	P33315	681 aa		3.11	□□□□□ -1.91
RKM3	YBR030W	CSH1	P38287	376 aa		3.11	□□□□□ -1.91
RKM3	YBR030W	IPI1	P38803	334 aa	Predicted RBP	3.11	□□□□□ -1.91
RKM3	YBR030W	YER188W	P40103	239 aa		3.11	□□□□□ -1.91
RKM3	YBR030W	RFC2	P40348	353 aa		3.11	□□□□□ -1.91
RKM3	YBR030W	SER2	P42941	309 aa		3.11	□□□□□ -1.91
RKM3	YBR030W	SMD3	P43321	101 aa	Known RBP	3.11	□□□□□ -1.91
RKM3	YBR030W	GPI14	P47088	403 aa	Known RBP	3.11	□□□□□ -1.91
RKM3	YBR030W	TDA4	P47153	279 aa		3.11	□□□□□ -1.91
RKM3	YBR030W	YGL101W	P53144	215 aa		3.11	□□□□□ -1.91
RKM3	YBR030W	YGL088W	P53151	121 aa		3.11	□□□□□ -1.91
RKM3	YBR030W	YHR032W-A	P0C5N6	59 aa		3.11	□□□□□ -1.91
RKM3	YBR030W	PKR1	Q03880	122 aa	Known RBP	3.11	□□□□□ -1.91
RKM3	YBR030W	YPR063C	Q12160	140 aa		3.11	□□□□□ -1.91
RKM3	YBR030W	DGK1	Q12382	290 aa		3.11	□□□□□ -1.91
RKM3	YBR030W	RPL2A	P0CX45	254 aa	Known RBP	3.1	□□□□□ -1.91
RKM3	YBR030W	RPL2B	P0CX46	254 aa	Known RBP	3.1	□□□□□ -1.91
RKM3	YBR030W	MRPS9	P38120	278 aa		3.1	□□□□□ -1.91
RKM3	YBR030W	AIM2	P39721	246 aa		3.1	□□□□□ -1.91
RKM3	YBR030W	AGE2	P40529	298 aa		3.1	□□□□□ -1.91
RKM3	YBR030W	AKR2	Q12013	749 aa		3.1	□□□□□ -1.91
RKM3	YBR030W	YOR342C	Q12182	319 aa		3.1	□□□□□ -1.91
RKM3	YBR030W	YDL180W	Q12301	547 aa		3.1	□□□□□ -1.91
RKM3	YBR030W	SAS5	Q99314	248 aa		3.1	□□□□□ -1.91
RKM3	YBR030W	TIM9	O74700	87 aa		3.09	□□□□□ -1.91
RKM3	YBR030W	PEX34	P25584	144 aa		3.09	□□□□□ -1.91
RKM3	YBR030W	SFK1	P35735	353 aa		3.09	□□□□□ -1.91
RKM3	YBR030W	OPY1	P38271	328 aa		3.09	□□□□□ -1.91
RKM3	YBR030W	YGR201C	P42936	225 aa		3.09	□□□□□ -1.91
RKM3	YBR030W	MNN5	P46982	586 aa		3.09	□□□□□ -1.91
RKM3	YBR030W	SNX4	P47057	423 aa		3.09	□□□□□ -1.91
RKM3	YBR030W	LSM3	P57743	89 aa	Known RBP	3.09	□□□□□ -1.91
RKM3	YBR030W	THI74	Q04083	370 aa		3.09	□□□□□ -1.91
RKM3	YBR030W	YOL014W	Q08110	124 aa		3.09	□□□□□ -1.91
RKM3	YBR030W	DAS2	Q12084	232 aa		3.09	□□□□□ -1.91
RKM3	YBR030W	AVT2	P39981	480 aa		3.08	□□□□□ -1.92
RKM3	YBR030W	TIF34	P40217	347 aa	Known RBP	3.08	□□□□□ -1.92
RKM3	YBR030W	TTI2	P47168	421 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms