RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	YPS3	Q12303	508 aa		5.77	□□□□□ -1.49
UBP13	YBL067C	YMR316C-A	I2HB70	103 aa		5.76	□□□□□ -1.49
UBP13	YBL067C	VAR1	P02381	398 aa		5.76	□□□□□ -1.49
UBP13	YBL067C	PHO85	P17157	305 aa		5.76	□□□□□ -1.49
UBP13	YBL067C	TIM17	P39515	158 aa		5.76	□□□□□ -1.49
UBP13	YBL067C	YAE1	P47118	141 aa	Predicted RBP	5.76	□□□□□ -1.49
UBP13	YBL067C	YPL278C	Q08990	100 aa		5.76	□□□□□ -1.49
UBP13	YBL067C	ATO3	Q12359	275 aa		5.76	□□□□□ -1.49
UBP13	YBL067C	COX14	P39103	70 aa		5.76	□□□□□ -1.49
UBP13	YBL067C	PTI1	P39927	425 aa	Predicted RBP	5.76	□□□□□ -1.49
UBP13	YBL067C	DLS1	P40366	167 aa		5.76	□□□□□ -1.49
UBP13	YBL067C	YJL213W	P40896	331 aa		5.76	□□□□□ -1.49
UBP13	YBL067C	YPL245W	Q12179	454 aa	Known RBP	5.76	□□□□□ -1.49
UBP13	YBL067C	PIS1	P06197	220 aa	Known RBP	5.75	□□□□□ -1.49
UBP13	YBL067C	YHR140W	P38842	239 aa		5.75	□□□□□ -1.49
UBP13	YBL067C	TTI2	P47168	421 aa		5.75	□□□□□ -1.49
UBP13	YBL067C	YLR177W	Q06251	628 aa		5.75	□□□□□ -1.49
UBP13	YBL067C	TSC3	Q3E790	80 aa		5.75	□□□□□ -1.49
UBP13	YBL067C	BGL2	P15703	313 aa	Known RBP	5.75	□□□□□ -1.49
UBP13	YBL067C	SMP1	P38128	452 aa		5.75	□□□□□ -1.49
UBP13	YBL067C	XPT1	P47165	209 aa		5.75	□□□□□ -1.49
UBP13	YBL067C	RPL42A	P0CX27	106 aa	Known RBP	5.74	□□□□□ -1.49
UBP13	YBL067C	RPL42B	P0CX28	106 aa	Known RBP	5.74	□□□□□ -1.49
UBP13	YBL067C	RPS8A	P0CX39	200 aa	Known RBP	5.74	□□□□□ -1.49
UBP13	YBL067C	RPS8B	P0CX40	200 aa	Known RBP	5.74	□□□□□ -1.49
UBP13	YBL067C	PTC1	P35182	281 aa		5.74	□□□□□ -1.49
UBP13	YBL067C	AIM18	P38884	321 aa		5.74	□□□□□ -1.49
UBP13	YBL067C	YJL218W	P40892	196 aa	Known RBP	5.74	□□□□□ -1.49
UBP13	YBL067C	NSG2	P53898	299 aa		5.74	□□□□□ -1.49
UBP13	YBL067C	EMI1	Q04406	187 aa		5.74	□□□□□ -1.49
UBP13	YBL067C	GRH1	Q04410	372 aa	Known RBP	5.74	□□□□□ -1.49
UBP13	YBL067C	RIO2	P40160	425 aa	Known RBP	5.74	□□□□□ -1.49
UBP13	YBL067C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
UBP13	YBL067C	TDA8	Q6B2U8	126 aa		5.74	□□□□□ -1.49
UBP13	YBL067C	SEC17	P32602	292 aa		5.73	□□□□□ -1.49
UBP13	YBL067C	MED6	P38782	295 aa		5.73	□□□□□ -1.49
UBP13	YBL067C	MOB1	P40484	314 aa		5.73	□□□□□ -1.49
UBP13	YBL067C	YJR085C	P47131	105 aa	Known RBP	5.73	□□□□□ -1.49
UBP13	YBL067C	NHP10	Q03435	203 aa		5.73	□□□□□ -1.49
UBP13	YBL067C	YLR179C	Q06252	201 aa	Known RBP	5.73	□□□□□ -1.49
UBP13	YBL067C	TIM22	Q12328	207 aa		5.73	□□□□□ -1.49
UBP13	YBL067C	EAF3	Q12432	401 aa		5.73	□□□□□ -1.49
UBP13	YBL067C	RPL14A	P36105	138 aa	Known RBP	5.72	□□□□□ -1.49
UBP13	YBL067C	RPL14B	P38754	138 aa	Known RBP	5.72	□□□□□ -1.49
UBP13	YBL067C	YDR366C	P87287	132 aa		5.72	□□□□□ -1.49
UBP13	YBL067C	GOT1	Q03554	138 aa		5.72	□□□□□ -1.49
UBP13	YBL067C	GAS3	Q03655	524 aa		5.72	□□□□□ -1.49
UBP13	YBL067C	DGK1	Q12382	290 aa		5.72	□□□□□ -1.49
UBP13	YBL067C	OCA6	Q12454	224 aa		5.72	□□□□□ -1.49
UBP13	YBL067C	TAD3	Q9URQ3	322 aa		5.72	□□□□□ -1.49
UBP13	YBL067C	YPT53	P36019	220 aa		5.72	□□□□□ -1.49
UBP13	YBL067C	DIE2	P50076	525 aa		5.72	□□□□□ -1.49
UBP13	YBL067C	YGL088W	P53151	121 aa		5.72	□□□□□ -1.49
UBP13	YBL067C	YTH1	Q06102	208 aa	Predicted RBP	5.72	□□□□□ -1.49
UBP13	YBL067C	YLR042C	Q07990	161 aa		5.72	□□□□□ -1.49
UBP13	YBL067C	YBL008W-A	Q3E821	79 aa		5.72	□□□□□ -1.49
UBP13	YBL067C	KOG1	P38873	1557 aa		5.72	□□□□□ -1.49
UBP13	YBL067C	MAG1	P22134	296 aa	Known RBP	5.71	□□□□□ -1.49
UBP13	YBL067C	TOD6	P34219	525 aa		5.71	□□□□□ -1.49
UBP13	YBL067C	YOR062C	P36025	268 aa		5.71	□□□□□ -1.49
UBP13	YBL067C	FMP46	P36141	133 aa	Known RBP	5.71	□□□□□ -1.49
UBP13	YBL067C	YNL200C	P40165	246 aa	Known RBP	5.71	□□□□□ -1.49
UBP13	YBL067C	YGR039W	P53225	103 aa		5.71	□□□□□ -1.49
UBP13	YBL067C	YPR114W	Q06107	315 aa		5.71	□□□□□ -1.49
UBP13	YBL067C	SPC3	Q12133	184 aa		5.71	□□□□□ -1.49
UBP13	YBL067C	ZRT3	P34240	503 aa		5.71	□□□□□ -1.5
UBP13	YBL067C	AIM2	P39721	246 aa		5.71	□□□□□ -1.5
UBP13	YBL067C	BNS1	P50084	137 aa		5.71	□□□□□ -1.5
UBP13	YBL067C	RPF1	P38805	295 aa	Known RBP	5.7	□□□□□ -1.5
UBP13	YBL067C	LSM12	P38828	187 aa	Known RBP	5.7	□□□□□ -1.5
UBP13	YBL067C	APJ1	P53940	528 aa		5.7	□□□□□ -1.5
UBP13	YBL067C	YPL162C	Q12042	273 aa		5.7	□□□□□ -1.5
UBP13	YBL067C	SPA2	P23201	1466 aa	Known RBP	5.7	□□□□□ -1.5
UBP13	YBL067C	HSL1	P34244	1518 aa		5.7	□□□□□ -1.5
UBP13	YBL067C	HAP2	P06774	265 aa		5.7	□□□□□ -1.5
UBP13	YBL067C	TIR1	P10863	254 aa		5.7	□□□□□ -1.5
UBP13	YBL067C	URA10	P30402	227 aa		5.7	□□□□□ -1.5
UBP13	YBL067C	SKI6	P46948	246 aa	Predicted RBP	5.7	□□□□□ -1.5
UBP13	YBL067C	NIP7	Q08962	181 aa	Known RBP	5.7	□□□□□ -1.5
UBP13	YBL067C	RPC19	P28000	142 aa	Known RBP	5.69	□□□□□ -1.5
UBP13	YBL067C	YER181C	P40097	107 aa		5.69	□□□□□ -1.5
UBP13	YBL067C	LPP1	Q04396	274 aa		5.69	□□□□□ -1.5
UBP13	YBL067C	IZH2	Q12442	317 aa		5.69	□□□□□ -1.5
UBP13	YBL067C	YGL194C-A	Q2V2P6	80 aa		5.69	□□□□□ -1.5
UBP13	YBL067C	YNL277W-A	Q3E7Z0	62 aa		5.69	□□□□□ -1.5
UBP13	YBL067C	SWR1	Q05471	1514 aa		5.69	□□□□□ -1.5
UBP13	YBL067C	CFD1	P40558	293 aa		5.68	□□□□□ -1.5
UBP13	YBL067C	ALG9	P53868	555 aa	Known RBP	5.68	□□□□□ -1.5
UBP13	YBL067C	FMP42	Q04991	504 aa		5.68	□□□□□ -1.5
UBP13	YBL067C	SPP41	P38904	1435 aa		5.68	□□□□□ -1.5
UBP13	YBL067C	TSC11	P40061	1430 aa		5.68	□□□□□ -1.5
UBP13	YBL067C	TRP1	P00912	224 aa		5.68	□□□□□ -1.5
UBP13	YBL067C	SPS2	P08459	502 aa		5.68	□□□□□ -1.5
UBP13	YBL067C	MRPL15	P36523	253 aa		5.68	□□□□□ -1.5
UBP13	YBL067C	AIF1	P52923	378 aa		5.68	□□□□□ -1.5
UBP13	YBL067C	BUD25	P85052	153 aa		5.68	□□□□□ -1.5
UBP13	YBL067C	SCW10	Q04951	389 aa		5.68	□□□□□ -1.5
UBP13	YBL067C	YDL211C	Q12121	372 aa		5.68	□□□□□ -1.5
UBP13	YBL067C	FCY1	Q12178	158 aa		5.68	□□□□□ -1.5
UBP13	YBL067C	YGL041W-A	P0C5N3	154 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms