RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	SLY41	P22215	453 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	YFL054C	P43549	646 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	CAB5	Q03941	241 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	COQ11	Q05892	277 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	SEI1	Q06058	285 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	YPR174C	Q06616	221 aa	Predicted RBP	3.54	□□□□□ -1.84
PIM1	YBL022C	YIR021W-A	Q3E739	70 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	STE4	P18851	423 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	EMP70	P32802	667 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	VAM3	Q12241	283 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	POC4	Q12245	148 aa	Predicted RBP	3.54	□□□□□ -1.84
PIM1	YBL022C	YSR3	P23501	404 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	SSH4	P32343	579 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	ICS2	P38284	255 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	TEM1	P38987	245 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	ERJ5	P43613	295 aa	Predicted RBP	3.54	□□□□□ -1.84
PIM1	YBL022C	EFM6	P53970	246 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	YPL077C	Q02831	240 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	TSA2	Q04120	196 aa		3.54	□□□□□ -1.84
PIM1	YBL022C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
PIM1	YBL022C	DET1	Q99288	334 aa	Known RBP	3.54	□□□□□ -1.84
PIM1	YBL022C	COX1	P00401	534 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	RPS21A	P0C0V8	87 aa	Known RBP	3.53	□□□□□ -1.84
PIM1	YBL022C	GEX1	P25596	615 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	SPS18	P32572	300 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	CBP4	P37267	147 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	RIB5	P38145	238 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	YBR292C	P38357	123 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	BTT1	P40314	149 aa	Predicted RBP	3.53	□□□□□ -1.84
PIM1	YBL022C	CPD1	P53314	239 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	YNL165W	P53891	406 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	SNT309	Q06091	175 aa	Predicted RBP	3.53	□□□□□ -1.84
PIM1	YBL022C	ATO3	Q12359	275 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	CPA1	P07258	411 aa	Known RBP	3.53	□□□□□ -1.84
PIM1	YBL022C	PAU1	P0CE88	120 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	PAU14	P0CE89	120 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	PAU6	P0CE90	120 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	PAU18	P0CE91	120 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	PAU8	P0CE92	120 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	PAU11	P0CE93	120 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	CPR2	P23285	205 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	KKQ8	P36004	724 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	PAU13	P38725	120 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	DOG1	P38774	246 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	IRC22	P40006	225 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	GPP2	P40106	250 aa	Known RBP	3.53	□□□□□ -1.84
PIM1	YBL022C	YGR269W	P40326	108 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	YIL067C	P40514	678 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	GPP1	P41277	250 aa	Known RBP	3.53	□□□□□ -1.84
PIM1	YBL022C	YCH1	P42937	148 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	PAU10	Q03050	120 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	GIS1	Q03833	894 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	YLR296W	Q05898	108 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	PAU20	Q08322	120 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	YPL257W	Q08974	193 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	PAU9	Q3E770	120 aa		3.53	□□□□□ -1.84
PIM1	YBL022C	TRA1	P38811	3744 aa		3.53	□□□□□ -1.85
PIM1	YBL022C	OPI3	P05375	206 aa		3.53	□□□□□ -1.85
PIM1	YBL022C	MSI1	P13712	422 aa		3.53	□□□□□ -1.85
PIM1	YBL022C	CBS1	P14066	229 aa		3.53	□□□□□ -1.85
PIM1	YBL022C	ATP10	P18496	279 aa		3.53	□□□□□ -1.85
PIM1	YBL022C	IDH2	P28241	369 aa	Known RBP	3.53	□□□□□ -1.85
PIM1	YBL022C	MIX23	P38162	196 aa		3.53	□□□□□ -1.85
PIM1	YBL022C	YAR068W	P39564	161 aa		3.53	□□□□□ -1.85
PIM1	YBL022C	NAS2	P40555	220 aa		3.53	□□□□□ -1.85
PIM1	YBL022C	NNF1	P47149	201 aa		3.53	□□□□□ -1.85
PIM1	YBL022C	MSY1	P48527	492 aa		3.53	□□□□□ -1.85
PIM1	YBL022C	ATG4	P53867	494 aa		3.53	□□□□□ -1.85
PIM1	YBL022C	RPL21A	Q02753	160 aa	Known RBP	3.53	□□□□□ -1.85
PIM1	YBL022C	ELC1	Q03071	99 aa		3.53	□□□□□ -1.85
PIM1	YBL022C	RPL21B	Q12672	160 aa	Known RBP	3.53	□□□□□ -1.85
PIM1	YBL022C	PAI3	P01094	68 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	CSE2	P33308	149 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	CUE1	P38428	203 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	GPI2	P46961	280 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	YDL183C	P48569	320 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	CDH1	P53197	566 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	SWT21	P53873	357 aa	Predicted RBP	3.52	□□□□□ -1.85
PIM1	YBL022C	DIC1	Q06143	298 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	YLR146W-A	Q2V2P1	62 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	STE7	P06784	515 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	CWP1	P28319	239 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	ERG2	P32352	222 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	YUH1	P35127	236 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	GPX1	P36014	167 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	YOR062C	P36025	268 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	SWD2	P36104	329 aa	Predicted RBP	3.52	□□□□□ -1.85
PIM1	YBL022C	SFH5	P47008	294 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	COX18	P53239	316 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	SCW4	P53334	386 aa	Known RBP	3.52	□□□□□ -1.85
PIM1	YBL022C	TRM112	P53738	135 aa	Predicted RBP	3.52	□□□□□ -1.85
PIM1	YBL022C	FPK1	P53739	893 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	PFA4	Q12006	378 aa		3.52	□□□□□ -1.85
PIM1	YBL022C	CUP2	P15315	225 aa		3.51	□□□□□ -1.85
PIM1	YBL022C	PRE2	P30656	287 aa	Known RBP	3.51	□□□□□ -1.85
PIM1	YBL022C	NNK1	P36003	928 aa		3.51	□□□□□ -1.85
PIM1	YBL022C	MOB1	P40484	314 aa		3.51	□□□□□ -1.85
PIM1	YBL022C	RPA43	P46669	326 aa		3.51	□□□□□ -1.85
PIM1	YBL022C	BXI1	P48558	297 aa		3.51	□□□□□ -1.85
PIM1	YBL022C	CRH1	P53301	507 aa		3.51	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms