RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W UPS3Q04006 179 aa0.34□□□□□ -2.36
UTP20YBL004W NAT3Q06504 195 aa0.34□□□□□ -2.36
UTP20YBL004W DIA2Q08496 732 aaPredicted RBP0.34□□□□□ -2.36
UTP20YBL004W TMA46Q12000 345 aaKnown RBP0.34□□□□□ -2.36
UTP20YBL004W NOT5Q12514 560 aaPredicted RBP0.34□□□□□ -2.36
UTP20YBL004W YPR053CQ6Q5F3 151 aa0.34□□□□□ -2.36
UTP20YBL004W ZRC1P20107 442 aa0.34□□□□□ -2.36
UTP20YBL004W EFM1P38732 585 aa0.34□□□□□ -2.36
UTP20YBL004W MTW1P39731 289 aa0.34□□□□□ -2.36
UTP20YBL004W YJR085CP47131 105 aaKnown RBP0.34□□□□□ -2.36
UTP20YBL004W NRK1P53915 240 aa0.34□□□□□ -2.36
UTP20YBL004W HSP26P15992 214 aaKnown RBP RIP-Chip data0.34□□□□□ -2.36not detected
UTP20YBL004W END3P39013 349 aa0.34□□□□□ -2.36
UTP20YBL004W CIN4P39110 191 aa0.34□□□□□ -2.36
UTP20YBL004W YGR201CP42936 225 aa0.34□□□□□ -2.36
UTP20YBL004W NUP57P48837 541 aa0.34□□□□□ -2.36
UTP20YBL004W TIM13P53299 105 aa0.34□□□□□ -2.36
UTP20YBL004W ASI3P53983 676 aa0.34□□□□□ -2.36
UTP20YBL004W POS5Q06892 414 aa0.34□□□□□ -2.36
UTP20YBL004W SCM3Q12334 223 aa0.34□□□□□ -2.36
UTP20YBL004W SOD2P00447 233 aa0.33□□□□□ -2.36
UTP20YBL004W ATP4P05626 244 aa0.33□□□□□ -2.36
UTP20YBL004W COX9P07255 59 aa0.33□□□□□ -2.36
UTP20YBL004W ZWF1P11412 505 aaKnown RBP0.33□□□□□ -2.36
UTP20YBL004W PTP2P29461 750 aa0.33□□□□□ -2.36
UTP20YBL004W NAT2P37293 288 aa0.33□□□□□ -2.36
UTP20YBL004W YPS5P53057 165 aa0.33□□□□□ -2.36
UTP20YBL004W YLR112WQ12130 139 aa0.33□□□□□ -2.36
UTP20YBL004W RPN6Q12377 434 aa0.33□□□□□ -2.36
UTP20YBL004W ATG31Q12421 196 aa0.33□□□□□ -2.36
UTP20YBL004W YLR302CO13544 120 aa0.33□□□□□ -2.36
UTP20YBL004W IES5P40060 125 aa0.33□□□□□ -2.36
UTP20YBL004W YGL034CP53186 121 aa0.33□□□□□ -2.36
UTP20YBL004W BRP1P53194 125 aa0.33□□□□□ -2.36
UTP20YBL004W RPL21AQ02753 160 aaKnown RBP0.33□□□□□ -2.36
UTP20YBL004W RRB1Q04225 511 aaKnown RBP0.33□□□□□ -2.36
UTP20YBL004W RPL21BQ12672 160 aaKnown RBP0.33□□□□□ -2.36
UTP20YBL004W MRPL4P36517 319 aa0.33□□□□□ -2.36
UTP20YBL004W HNT2P49775 206 aa0.33□□□□□ -2.36
UTP20YBL004W MEH1Q02205 184 aa0.33□□□□□ -2.36
UTP20YBL004W DBP9Q06218 594 aaKnown RBP0.33□□□□□ -2.36
UTP20YBL004W TAF3Q12297 353 aa0.33□□□□□ -2.36
UTP20YBL004W SAY1P53324 424 aa0.33□□□□□ -2.36
UTP20YBL004W GAL83Q04739 417 aa0.33□□□□□ -2.36
UTP20YBL004W YDL114WQ07530 308 aa0.33□□□□□ -2.36
UTP20YBL004W BOL1Q3E793 110 aa0.33□□□□□ -2.36
UTP20YBL004W YDL012CQ12489 107 aa0.33□□□□□ -2.36
UTP20YBL004W PET494P07390 489 aaPredicted RBP0.33□□□□□ -2.36
UTP20YBL004W MRP2P10663 115 aaPredicted RBP0.33□□□□□ -2.36
UTP20YBL004W URB2P47108 1174 aa0.33□□□□□ -2.36
UTP20YBL004W YJR056CP47115 236 aa0.33□□□□□ -2.36
UTP20YBL004W YPT32P51996 222 aaKnown RBP0.33□□□□□ -2.36
UTP20YBL004W NOP1P15646 327 aaKnown RBP0.32□□□□□ -2.36
UTP20YBL004W CBP4P37267 147 aa0.32□□□□□ -2.36
UTP20YBL004W YMR134WP40207 237 aa0.32□□□□□ -2.36
UTP20YBL004W FLX1P40464 311 aa0.32□□□□□ -2.36
UTP20YBL004W YDR366CP87287 132 aa0.32□□□□□ -2.36
UTP20YBL004W PCL9Q12477 304 aa0.32□□□□□ -2.36
UTP20YBL004W YPK2P18961 677 aa0.32□□□□□ -2.36
UTP20YBL004W KRR1P25586 316 aaPredicted RBP0.32□□□□□ -2.36
UTP20YBL004W IKI1P38874 309 aa0.32□□□□□ -2.36
UTP20YBL004W CCT4P39078 528 aaKnown RBP0.32□□□□□ -2.36
UTP20YBL004W MCM22P47167 239 aa0.32□□□□□ -2.36
UTP20YBL004W OCA2P53949 197 aa0.32□□□□□ -2.36
UTP20YBL004W YMR209CQ03648 457 aa0.32□□□□□ -2.36
UTP20YBL004W YDR029WQ12111 104 aa0.32□□□□□ -2.36
UTP20YBL004W YCT1Q12235 531 aa0.32□□□□□ -2.36
UTP20YBL004W UBA3Q99344 299 aa0.32□□□□□ -2.36
UTP20YBL004W CPR1P14832 162 aaKnown RBP0.32□□□□□ -2.36
UTP20YBL004W FZO1P38297 855 aa0.32□□□□□ -2.36
UTP20YBL004W NIF3P53081 288 aa0.32□□□□□ -2.36
UTP20YBL004W RGM1Q00453 211 aa0.32□□□□□ -2.36
UTP20YBL004W RAV2Q03956 351 aa0.32□□□□□ -2.36
UTP20YBL004W RNH203Q12338 110 aa0.32□□□□□ -2.36
UTP20YBL004W YPR145C-AQ2V2P0 78 aa0.32□□□□□ -2.36
UTP20YBL004W YMR122W-AQ3E842 84 aa0.32□□□□□ -2.36
UTP20YBL004W PHO80P20052 293 aa0.32□□□□□ -2.36
UTP20YBL004W PDB1P32473 366 aaKnown RBP0.32□□□□□ -2.36
UTP20YBL004W RPN12P32496 274 aa0.32□□□□□ -2.36
UTP20YBL004W YKR078WP36158 585 aaKnown RBP0.32□□□□□ -2.36
UTP20YBL004W RPL9BP51401 191 aaKnown RBP0.32□□□□□ -2.36
UTP20YBL004W GPI1P53306 609 aa0.32□□□□□ -2.36
UTP20YBL004W YPL119C-AQ3E751 87 aa0.32□□□□□ -2.36
UTP20YBL004W RIB3Q99258 208 aa0.32□□□□□ -2.36
UTP20YBL004W EXO70P19658 623 aa0.32□□□□□ -2.36
UTP20YBL004W SPO13P23624 291 aa0.32□□□□□ -2.36
UTP20YBL004W IDH1P28834 360 aaKnown RBP RIP-Chip data0.32□□□□□ -2.36not detected
UTP20YBL004W MDM31P38880 579 aa0.32□□□□□ -2.36
UTP20YBL004W FCF1Q05498 189 aaPredicted RBP0.32□□□□□ -2.36
UTP20YBL004W MDM36Q06820 579 aa0.32□□□□□ -2.36
UTP20YBL004W MEK1P24719 497 aaPredicted RBP0.32□□□□□ -2.36
UTP20YBL004W RFA3P26755 122 aaKnown RBP0.32□□□□□ -2.36
UTP20YBL004W CDC15P27636 974 aa0.32□□□□□ -2.36
UTP20YBL004W PEX3P28795 441 aa0.32□□□□□ -2.36
UTP20YBL004W GOS1P38736 223 aa0.32□□□□□ -2.36
UTP20YBL004W BIO4P53630 237 aa0.32□□□□□ -2.36
UTP20YBL004W SWT21P53873 357 aaPredicted RBP0.32□□□□□ -2.36
UTP20YBL004W YLR179CQ06252 201 aaKnown RBP0.32□□□□□ -2.36
UTP20YBL004W MATALPHA1P0CY06 175 aa0.31□□□□□ -2.36
UTP20YBL004W HMLALPHA1P0CY07 175 aa0.31□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms