RNA–Protein interactions for RNA: tY(GUA)J2

SUP4, Transcript of Tyrosine tRNA (tRNA-Tyr), predicted by tRNAscan-SE analysis, yeast

Gene SUP4, Length 75 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP4	tY(GUA)J2	MLC1	P53141	149 aa		6.95	□□□□□ -1.3
SUP4	tY(GUA)J2	RMD1	Q03441	430 aa		6.95	□□□□□ -1.3
SUP4	tY(GUA)J2	YLR271W	Q06152	274 aa		6.95	□□□□□ -1.3
SUP4	tY(GUA)J2	BIK1	P11709	440 aa		6.94	□□□□□ -1.3
SUP4	tY(GUA)J2	TPM1	P17536	199 aa	Known RBP	6.94	□□□□□ -1.3
SUP4	tY(GUA)J2	HAP5	Q02516	242 aa		6.94	□□□□□ -1.3
SUP4	tY(GUA)J2	VPS20	Q04272	221 aa		6.94	□□□□□ -1.3
SUP4	tY(GUA)J2	RIM20	Q12033	661 aa		6.94	□□□□□ -1.3
SUP4	tY(GUA)J2	GRX1	P25373	110 aa	Known RBP	6.93	□□□□□ -1.3
SUP4	tY(GUA)J2	APL2	P36000	726 aa	Predicted RBP	6.93	□□□□□ -1.3
SUP4	tY(GUA)J2	SET1	P38827	1080 aa	Known RBP	6.93	□□□□□ -1.3
SUP4	tY(GUA)J2	BDH2	P39713	417 aa		6.93	□□□□□ -1.3
SUP4	tY(GUA)J2	NPA3	P47122	385 aa		6.93	□□□□□ -1.3
SUP4	tY(GUA)J2	YGL242C	P53066	181 aa		6.93	□□□□□ -1.3
SUP4	tY(GUA)J2	HST1	P53685	503 aa		6.93	□□□□□ -1.3
SUP4	tY(GUA)J2	IMH1	Q06704	911 aa	Known RBP	6.93	□□□□□ -1.3
SUP4	tY(GUA)J2	PSH1	Q12161	406 aa		6.93	□□□□□ -1.3
SUP4	tY(GUA)J2	TRL1	P09880	827 aa	Known RBP	6.92	□□□□□ -1.3
SUP4	tY(GUA)J2	APP1	P53933	587 aa		6.92	□□□□□ -1.3
SUP4	tY(GUA)J2	YAH1	Q12184	172 aa	Known RBP	6.92	□□□□□ -1.3
SUP4	tY(GUA)J2	PHM7	Q12252	991 aa		6.92	□□□□□ -1.3
SUP4	tY(GUA)J2	YRF1-3	P0CX14	1859 aa		6.92	□□□□□ -1.3
SUP4	tY(GUA)J2	YRF1-7	P0CX15	1859 aa		6.92	□□□□□ -1.3
SUP4	tY(GUA)J2	YRF1-6	P53819	1859 aa		6.92	□□□□□ -1.3
SUP4	tY(GUA)J2	COB	P00163	385 aa		6.91	□□□□□ -1.3
SUP4	tY(GUA)J2	AAP1	P37898	856 aa	Known RBP	6.91	□□□□□ -1.3
SUP4	tY(GUA)J2	YGL081W	P53156	320 aa		6.91	□□□□□ -1.3
SUP4	tY(GUA)J2	MTC5	Q03897	1148 aa		6.91	□□□□□ -1.3
SUP4	tY(GUA)J2	YPR204W	Q08995	1032 aa		6.91	□□□□□ -1.3
SUP4	tY(GUA)J2	KTR1	P27810	393 aa	Known RBP	6.9	□□□□□ -1.3
SUP4	tY(GUA)J2	MNN4	P36044	1178 aa		6.9	□□□□□ -1.3
SUP4	tY(GUA)J2	STM1	P39015	273 aa	Known RBP	6.9	□□□□□ -1.3
SUP4	tY(GUA)J2	RSM25	P40496	264 aa		6.9	□□□□□ -1.3
SUP4	tY(GUA)J2	MRPS35	P53292	345 aa		6.9	□□□□□ -1.3
SUP4	tY(GUA)J2	ALO1	P54783	526 aa	Known RBP	6.9	□□□□□ -1.3
SUP4	tY(GUA)J2	TUM1	Q08686	304 aa	Known RBP	6.9	□□□□□ -1.3
SUP4	tY(GUA)J2	SNU66	Q12420	587 aa	Predicted RBP	6.9	□□□□□ -1.3
SUP4	tY(GUA)J2	KEX1	P09620	729 aa		6.89	□□□□□ -1.31
SUP4	tY(GUA)J2	RPL19A	P0CX82	189 aa	Known RBP	6.89	□□□□□ -1.31
SUP4	tY(GUA)J2	RPL19B	P0CX83	189 aa	Predicted RBP	6.89	□□□□□ -1.31
SUP4	tY(GUA)J2	SPO22	P40511	975 aa		6.89	□□□□□ -1.31
SUP4	tY(GUA)J2	HYR1	P40581	163 aa	Known RBP	6.89	□□□□□ -1.31
SUP4	tY(GUA)J2	PEX14	P53112	341 aa		6.89	□□□□□ -1.31
SUP4	tY(GUA)J2	PIL1	P53252	339 aa	Known RBP	6.89	□□□□□ -1.31
SUP4	tY(GUA)J2	LCD1	Q04377	747 aa		6.89	□□□□□ -1.31
SUP4	tY(GUA)J2	HRQ1	Q05549	1077 aa		6.89	□□□□□ -1.31
SUP4	tY(GUA)J2	AIM44	Q99299	758 aa		6.89	□□□□□ -1.31
SUP4	tY(GUA)J2	ARG8	P18544	423 aa		6.88	□□□□□ -1.31
SUP4	tY(GUA)J2	KNS1	P32350	737 aa	Predicted RBP	6.88	□□□□□ -1.31
SUP4	tY(GUA)J2	OSH3	P38713	996 aa	Known RBP	6.88	□□□□□ -1.31
SUP4	tY(GUA)J2	RSC1	P53236	928 aa		6.88	□□□□□ -1.31
SUP4	tY(GUA)J2	LAM6	Q08001	693 aa		6.88	□□□□□ -1.31
SUP4	tY(GUA)J2	GYP5	Q12344	894 aa		6.88	□□□□□ -1.31
SUP4	tY(GUA)J2	SSK22	P25390	1331 aa	Predicted RBP	6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	SLA1	P32790	1244 aa		6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	SER1	P33330	395 aa	Known RBP	6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	CAB3	P36076	571 aa		6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	TTI1	P36097	1038 aa		6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	PBY1	P38254	753 aa		6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	RVS167	P39743	482 aa	Known RBP	6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	AIM9	P40053	627 aa	Known RBP	6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	DOT5	P40553	215 aa		6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	CIR1	P42940	261 aa		6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	HXT10	P43581	546 aa		6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	YGL082W	P53155	381 aa		6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	FOX2	Q02207	900 aa	Known RBP	6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	FCP1	Q03254	732 aa		6.87	□□□□□ -1.31
SUP4	tY(GUA)J2	RPN12	P32496	274 aa		6.86	□□□□□ -1.31
SUP4	tY(GUA)J2	KTR3	P38130	404 aa	Predicted RBP	6.86	□□□□□ -1.31
SUP4	tY(GUA)J2	ARP5	P53946	755 aa		6.86	□□□□□ -1.31
SUP4	tY(GUA)J2	PEX19	Q07418	342 aa		6.86	□□□□□ -1.31
SUP4	tY(GUA)J2	ETT1	Q08421	412 aa	Known RBP	6.86	□□□□□ -1.31
SUP4	tY(GUA)J2	PRP40	P33203	583 aa	Known RBP	6.85	□□□□□ -1.31
SUP4	tY(GUA)J2	SIS2	P36024	562 aa		6.85	□□□□□ -1.31
SUP4	tY(GUA)J2	YKR075C	P36155	307 aa		6.85	□□□□□ -1.31
SUP4	tY(GUA)J2	RKM3	P38222	552 aa		6.85	□□□□□ -1.31
SUP4	tY(GUA)J2	PSK2	Q08217	1101 aa		6.85	□□□□□ -1.31
SUP4	tY(GUA)J2	TSR3	Q12094	313 aa	Known RBP	6.85	□□□□□ -1.31
SUP4	tY(GUA)J2	SAC3	P46674	1301 aa		6.84	□□□□□ -1.31
SUP4	tY(GUA)J2	DCD1	P06773	312 aa		6.84	□□□□□ -1.31
SUP4	tY(GUA)J2	SEC18	P18759	758 aa	Known RBP	6.84	□□□□□ -1.31
SUP4	tY(GUA)J2	PRX1	P34227	261 aa	Known RBP	6.84	□□□□□ -1.31
SUP4	tY(GUA)J2	MIC60	P36112	540 aa		6.84	□□□□□ -1.31
SUP4	tY(GUA)J2	YFR006W	P43590	535 aa		6.84	□□□□□ -1.31
SUP4	tY(GUA)J2	YJL181W	P46987	611 aa		6.84	□□□□□ -1.31
SUP4	tY(GUA)J2	ENP2	P48234	707 aa	Known RBP	6.84	□□□□□ -1.31
SUP4	tY(GUA)J2	MSB4	Q12317	492 aa		6.84	□□□□□ -1.31
SUP4	tY(GUA)J2	DUR1,2	P32528	1835 aa	Known RBP	6.84	□□□□□ -1.31
SUP4	tY(GUA)J2	RIM15	P43565	1770 aa		6.83	□□□□□ -1.32
SUP4	tY(GUA)J2	OPI1	P21957	404 aa		6.83	□□□□□ -1.32
SUP4	tY(GUA)J2	CIC1	P38779	376 aa	Known RBP	6.83	□□□□□ -1.32
SUP4	tY(GUA)J2	EPS1	P40557	701 aa		6.83	□□□□□ -1.32
SUP4	tY(GUA)J2	CTF18	P49956	741 aa		6.83	□□□□□ -1.32
SUP4	tY(GUA)J2	PIB2	P53191	635 aa		6.83	□□□□□ -1.32
SUP4	tY(GUA)J2	YNL193W	P53870	558 aa		6.83	□□□□□ -1.32
SUP4	tY(GUA)J2	APC11	Q12157	165 aa		6.83	□□□□□ -1.32
SUP4	tY(GUA)J2	HAT1	Q12341	374 aa		6.83	□□□□□ -1.32
SUP4	tY(GUA)J2	RRI2	Q12348	645 aa		6.83	□□□□□ -1.32
SUP4	tY(GUA)J2	AI2	P03876	854 aa		6.82	□□□□□ -1.32
SUP4	tY(GUA)J2	PIF1	P07271	859 aa		6.82	□□□□□ -1.32

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms