RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR42, Length 351 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR42	snR42	RPO21	P04050	1733 aa	Known RBP	5	□□□□□ -1.61
snR42	snR42	BNI1	P41832	1953 aa		5	□□□□□ -1.61
snR42	snR42	MMS1	Q06211	1407 aa		5	□□□□□ -1.61
snR42	snR42	TRM1	P15565	570 aa	Known RBP	5	□□□□□ -1.61
snR42	snR42	PUS1	Q12211	544 aa	Known RBP	5	□□□□□ -1.61
snR42	snR42	DPH6	Q12429	685 aa		5	□□□□□ -1.61
snR42	snR42	MYO4	P32492	1471 aa		5	□□□□□ -1.61
snR42	snR42	STH1	P32597	1359 aa		4.99	□□□□□ -1.61
snR42	snR42	YBL086C	P38177	466 aa		4.98	□□□□□ -1.61
snR42	snR42	MET10	P39692	1035 aa		4.98	□□□□□ -1.61
snR42	snR42	HST2	P53686	357 aa		4.98	□□□□□ -1.61
snR42	snR42	SAS10	Q12136	610 aa	Predicted RBP	4.98	□□□□□ -1.61
snR42	snR42	VAC17	P25591	423 aa		4.97	□□□□□ -1.61
snR42	snR42	YJR098C	P47139	656 aa		4.97	□□□□□ -1.61
snR42	snR42	DIT2	P21595	489 aa		4.96	□□□□□ -1.62
snR42	snR42	ROG3	P43602	733 aa		4.96	□□□□□ -1.62
snR42	snR42	LSB3	P43603	459 aa	Known RBP	4.96	□□□□□ -1.62
snR42	snR42	TY1A-MR1	Q04215	440 aa		4.96	□□□□□ -1.62
snR42	snR42	PHM7	Q12252	991 aa		4.96	□□□□□ -1.62
snR42	snR42	TCB1	Q12466	1186 aa		4.96	□□□□□ -1.62
snR42	snR42	SCJ1	P25303	377 aa		4.95	□□□□□ -1.62
snR42	snR42	OSH7	P38755	437 aa		4.95	□□□□□ -1.62
snR42	snR42	SNQ2	P32568	1501 aa	Known RBP	4.95	□□□□□ -1.62
snR42	snR42	NUP170	P38181	1502 aa		4.94	□□□□□ -1.62
snR42	snR42	DLD1	P32891	587 aa		4.94	□□□□□ -1.62
snR42	snR42	LYS5	P50113	272 aa		4.94	□□□□□ -1.62
snR42	snR42	MMP1	Q12372	583 aa		4.94	□□□□□ -1.62
snR42	snR42	SNT2	P53127	1403 aa		4.93	□□□□□ -1.62
snR42	snR42	ULS1	Q08562	1619 aa		4.93	□□□□□ -1.62
snR42	snR42	MLP2	P40457	1679 aa		4.92	□□□□□ -1.62
snR42	snR42	CCP1	P00431	361 aa		4.92	□□□□□ -1.62
snR42	snR42	EMW1	P42842	904 aa	Known RBP	4.92	□□□□□ -1.62
snR42	snR42	GLN1	P32288	370 aa	Known RBP	4.91	□□□□□ -1.62
snR42	snR42	SPO14	P36126	1683 aa		4.91	□□□□□ -1.62
snR42	snR42	JJJ3	P47138	172 aa		4.9	□□□□□ -1.63
snR42	snR42	TAF7	Q05021	590 aa		4.9	□□□□□ -1.63
snR42	snR42	SPB4	P25808	606 aa	Predicted RBP	4.89	□□□□□ -1.63
snR42	snR42	APP1	P53933	587 aa		4.89	□□□□□ -1.63
snR42	snR42	NUP157	P40064	1391 aa	Known RBP	4.89	□□□□□ -1.63
snR42	snR42	DNF2	Q12675	1612 aa		4.88	□□□□□ -1.63
snR42	snR42	PDR10	P51533	1564 aa		4.87	□□□□□ -1.63
snR42	snR42	DOP1	Q03921	1698 aa		4.87	□□□□□ -1.63
snR42	snR42	ESS1	P22696	170 aa		4.87	□□□□□ -1.63
snR42	snR42	MDJ1	P35191	511 aa		4.87	□□□□□ -1.63
snR42	snR42	PDR12	Q02785	1511 aa		4.87	□□□□□ -1.63
snR42	snR42	PDR15	Q04182	1529 aa	Known RBP	4.87	□□□□□ -1.63
snR42	snR42	NSG2	P53898	299 aa		4.86	□□□□□ -1.63
snR42	snR42	IQG1	Q12280	1495 aa		4.86	□□□□□ -1.63
snR42	snR42	IRC20	Q06554	1556 aa		4.86	□□□□□ -1.63
snR42	snR42	CDC19	P00549	500 aa	Known RBP	4.85	□□□□□ -1.63
snR42	snR42	YJU3	P28321	313 aa		4.85	□□□□□ -1.63
snR42	snR42	MKS1	P34072	584 aa		4.85	□□□□□ -1.63
snR42	snR42	RSC30	P38781	883 aa		4.85	□□□□□ -1.63
snR42	snR42	GDB1	Q06625	1536 aa		4.85	□□□□□ -1.63
snR42	snR42	BUD3	P25558	1636 aa		4.84	□□□□□ -1.63
snR42	snR42	DFG5	Q05031	458 aa		4.84	□□□□□ -1.63
snR42	snR42	TRM3	Q07527	1436 aa		4.83	□□□□□ -1.64
snR42	snR42	ATF2	P53296	535 aa		4.83	□□□□□ -1.64
snR42	snR42	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
snR42	snR42	NAM8	Q00539	523 aa	Known RBP	4.83	□□□□□ -1.64
snR42	snR42	AI1	P03875	834 aa		4.82	□□□□□ -1.64
snR42	snR42	FIG4	P42837	879 aa		4.82	□□□□□ -1.64
snR42	snR42	VTC4	P47075	721 aa		4.82	□□□□□ -1.64
snR42	snR42	BDS1	Q08347	646 aa		4.82	□□□□□ -1.64
snR42	snR42	YFL066C	P43538	392 aa		4.81	□□□□□ -1.64
snR42	snR42	CCT8	P47079	568 aa	Known RBP	4.81	□□□□□ -1.64
snR42	snR42	THI72	Q08579	599 aa		4.81	□□□□□ -1.64
snR42	snR42	STE6	P12866	1290 aa		4.79	□□□□□ -1.64
snR42	snR42	FBP26	P32604	452 aa		4.79	□□□□□ -1.64
snR42	snR42	CUZ1	P53899	274 aa		4.78	□□□□□ -1.64
snR42	snR42	CAT8	P39113	1433 aa		4.78	□□□□□ -1.64
snR42	snR42	GEA1	P47102	1408 aa	Predicted RBP	4.78	□□□□□ -1.64
snR42	snR42	CHC1	P22137	1653 aa	Known RBP	4.77	□□□□□ -1.65
snR42	snR42	ARG8	P18544	423 aa		4.77	□□□□□ -1.65
snR42	snR42	CEM1	P39525	442 aa		4.77	□□□□□ -1.65
snR42	snR42	PKH3	Q03306	898 aa	Predicted RBP	4.77	□□□□□ -1.65
snR42	snR42	YOR093C	Q12275	1648 aa		4.76	□□□□□ -1.65
snR42	snR42	YPR053C	Q6Q5F3	151 aa		4.76	□□□□□ -1.65
snR42	snR42	BNR1	P40450	1375 aa		4.76	□□□□□ -1.65
snR42	snR42	ARO1	P08566	1588 aa	Known RBP	4.75	□□□□□ -1.65
snR42	snR42	DAL1	P32375	460 aa		4.75	□□□□□ -1.65
snR42	snR42	YBT1	P32386	1661 aa		4.75	□□□□□ -1.65
snR42	snR42	SEC7	P11075	2009 aa	Known RBP	4.74	□□□□□ -1.65
snR42	snR42	TEC1	P18412	486 aa		4.74	□□□□□ -1.65
snR42	snR42	KTR1	P27810	393 aa	Known RBP	4.74	□□□□□ -1.65
snR42	snR42	YAP3	P38749	330 aa		4.74	□□□□□ -1.65
snR42	snR42	YNR021W	P53723	404 aa	Known RBP	4.74	□□□□□ -1.65
snR42	snR42	ADE12	P80210	433 aa	Known RBP	4.73	□□□□□ -1.65
snR42	snR42	URN1	Q06525	465 aa	Known RBP	4.73	□□□□□ -1.65
snR42	snR42	YPR084W	Q06821	456 aa		4.73	□□□□□ -1.65
snR42	snR42	TY3B-G	Q99315	1547 aa		4.72	□□□□□ -1.65
snR42	snR42	ISU1	Q03020	165 aa		4.72	□□□□□ -1.65
snR42	snR42	DNF3	Q12674	1656 aa		4.71	□□□□□ -1.66
snR42	snR42	RPP2B	P02400	110 aa	Known RBP	4.71	□□□□□ -1.66
snR42	snR42	SBP1	P10080	294 aa	Known RBP	4.71	□□□□□ -1.66
snR42	snR42	SKN7	P38889	622 aa		4.71	□□□□□ -1.66
snR42	snR42	SYT1	Q06836	1226 aa		4.71	□□□□□ -1.66
snR42	snR42	BUD21	Q08492	214 aa	Predicted RBP	4.71	□□□□□ -1.66
snR42	snR42	YSP2	Q06681	1438 aa		4.71	□□□□□ -1.66
snR42	snR42	DIT1	P21623	536 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms