RNA–Protein interactions for RNA: YPR138C

MEP3, Transcript of Ammonium permease of high capacity and low affinity, yeast

Gene MEP3, Length 1,470 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MEP3	YPR138C	APL2	P36000	726 aa	Predicted RBP	11.38	□□□□□ -0.59
MEP3	YPR138C	SET1	P38827	1080 aa	Known RBP	11.38	□□□□□ -0.59
MEP3	YPR138C	TEA1	P47988	759 aa		11.38	□□□□□ -0.59
MEP3	YPR138C	RPC31	P17890	251 aa		11.38	□□□□□ -0.59
MEP3	YPR138C	SWC3	P31376	625 aa		11.38	□□□□□ -0.59
MEP3	YPR138C	NYV1	Q12255	253 aa		11.37	□□□□□ -0.59
MEP3	YPR138C	DCD1	P06773	312 aa		11.36	□□□□□ -0.59
MEP3	YPR138C	ECM16	Q04217	1267 aa	Known RBP	11.36	□□□□□ -0.59
MEP3	YPR138C	LPD1	P09624	499 aa	Known RBP	11.35	□□□□□ -0.59
MEP3	YPR138C	UBP12	P39538	1254 aa		11.34	□□□□□ -0.59
MEP3	YPR138C	NMD2	P38798	1089 aa	Known RBP	11.33	□□□□□ -0.6
MEP3	YPR138C	SER1	P33330	395 aa	Known RBP	11.32	□□□□□ -0.6
MEP3	YPR138C	LYS4	P49367	693 aa	Predicted RBP	11.32	□□□□□ -0.6
MEP3	YPR138C	YGL082W	P53155	381 aa		11.32	□□□□□ -0.6
MEP3	YPR138C	BUG1	Q12191	341 aa		11.32	□□□□□ -0.6
MEP3	YPR138C	BDF1	P35817	686 aa		11.32	□□□□□ -0.6
MEP3	YPR138C	DUR1,2	P32528	1835 aa	Known RBP	11.31	□□□□□ -0.6
MEP3	YPR138C	SSK22	P25390	1331 aa	Predicted RBP	11.3	□□□□□ -0.6
MEP3	YPR138C	CDC27	P38042	758 aa		11.3	□□□□□ -0.6
MEP3	YPR138C	CTH1	P47976	325 aa		11.3	□□□□□ -0.6
MEP3	YPR138C	ITC1	P53125	1264 aa		11.3	□□□□□ -0.6
MEP3	YPR138C	UTP22	P53254	1237 aa	Predicted RBP	11.3	□□□□□ -0.6
MEP3	YPR138C	PKH1	Q03407	766 aa		11.3	□□□□□ -0.6
MEP3	YPR138C	MTC5	Q03897	1148 aa		11.3	□□□□□ -0.6
MEP3	YPR138C	SSF1	P38789	453 aa	Predicted RBP	11.29	□□□□□ -0.6
MEP3	YPR138C	SAC3	P46674	1301 aa		11.29	□□□□□ -0.6
MEP3	YPR138C	CDC16	P09798	840 aa		11.28	□□□□□ -0.6
MEP3	YPR138C	GTT3	P39996	337 aa		11.28	□□□□□ -0.6
MEP3	YPR138C	NKP2	Q06162	153 aa		11.28	□□□□□ -0.6
MEP3	YPR138C	SIS2	P36024	562 aa		11.27	□□□□□ -0.6
MEP3	YPR138C	FCP1	Q03254	732 aa		11.27	□□□□□ -0.6
MEP3	YPR138C	PSH1	Q12161	406 aa		11.27	□□□□□ -0.6
MEP3	YPR138C	RAD50	P12753	1312 aa		11.26	□□□□□ -0.61
MEP3	YPR138C	PMD1	P32634	1753 aa		11.26	□□□□□ -0.61
MEP3	YPR138C	RFC1	P38630	861 aa	Known RBP	11.25	□□□□□ -0.61
MEP3	YPR138C	HAT1	Q12341	374 aa		11.25	□□□□□ -0.61
MEP3	YPR138C	SUP35	P05453	685 aa	Known RBP	11.25	□□□□□ -0.61
MEP3	YPR138C	ALD2	P47771	506 aa		11.25	□□□□□ -0.61
MEP3	YPR138C	RAT1	Q02792	1006 aa	Known RBP	11.25	□□□□□ -0.61
MEP3	YPR138C	YIR014W	P40570	242 aa		11.24	□□□□□ -0.61
MEP3	YPR138C	HXT10	P43581	546 aa		11.24	□□□□□ -0.61
MEP3	YPR138C	NCB2	Q92317	146 aa		11.24	□□□□□ -0.61
MEP3	YPR138C	TOS1	P38288	455 aa		11.23	□□□□□ -0.61
MEP3	YPR138C	ALD3	P54114	506 aa		11.23	□□□□□ -0.61
MEP3	YPR138C	YBL086C	P38177	466 aa		11.22	□□□□□ -0.61
MEP3	YPR138C	BDP1	P46678	594 aa		11.22	□□□□□ -0.61
MEP3	YPR138C	YPR148C	Q06523	435 aa		11.22	□□□□□ -0.61
MEP3	YPR138C	SSA2	P10592	639 aa	Known RBP	11.21	□□□□□ -0.61
MEP3	YPR138C	DIB1	Q06819	143 aa	Predicted RBP	11.21	□□□□□ -0.61
MEP3	YPR138C	ECM21	P38167	1117 aa	Known RBP	11.19	□□□□□ -0.62
MEP3	YPR138C	UBP10	P53874	792 aa	Predicted RBP	11.19	□□□□□ -0.62
MEP3	YPR138C	HKR1	P41809	1802 aa		11.19	□□□□□ -0.62
MEP3	YPR138C	NOT3	P06102	836 aa	Known RBP	11.19	□□□□□ -0.62
MEP3	YPR138C	GYP5	Q12344	894 aa		11.19	□□□□□ -0.62
MEP3	YPR138C	FIG2	P25653	1609 aa		11.18	□□□□□ -0.62
MEP3	YPR138C	PDR18	P53756	1333 aa		11.18	□□□□□ -0.62
MEP3	YPR138C	UGA2	P38067	497 aa		11.18	□□□□□ -0.62
MEP3	YPR138C	YGL242C	P53066	181 aa		11.18	□□□□□ -0.62
MEP3	YPR138C	MLC1	P53141	149 aa		11.18	□□□□□ -0.62
MEP3	YPR138C	RIX7	Q07844	837 aa	Known RBP	11.18	□□□□□ -0.62
MEP3	YPR138C	CTI6	Q08923	506 aa		11.18	□□□□□ -0.62
MEP3	YPR138C	SNU66	Q12420	587 aa	Predicted RBP	11.18	□□□□□ -0.62
MEP3	YPR138C	ADR1	P07248	1323 aa		11.17	□□□□□ -0.62
MEP3	YPR138C	GCR2	Q01722	534 aa		11.17	□□□□□ -0.62
MEP3	YPR138C	UBP16	Q02863	499 aa		11.17	□□□□□ -0.62
MEP3	YPR138C	KTR3	P38130	404 aa	Predicted RBP	11.16	□□□□□ -0.62
MEP3	YPR138C	HPC2	Q01448	625 aa		11.16	□□□□□ -0.62
MEP3	YPR138C	BDF2	Q07442	638 aa		11.15	□□□□□ -0.62
MEP3	YPR138C	SLA1	P32790	1244 aa		11.14	□□□□□ -0.63
MEP3	YPR138C	BRN1	P38170	754 aa		11.14	□□□□□ -0.63
MEP3	YPR138C	FAS2	P19097	1887 aa	Known RBP	11.14	□□□□□ -0.63
MEP3	YPR138C	DLD1	P32891	587 aa		11.13	□□□□□ -0.63
MEP3	YPR138C	ALO1	P54783	526 aa	Known RBP	11.13	□□□□□ -0.63
MEP3	YPR138C	BRE1	Q07457	700 aa	Known RBP	11.13	□□□□□ -0.63
MEP3	YPR138C	VAS1	P07806	1104 aa	Known RBP	11.12	□□□□□ -0.63
MEP3	YPR138C	SEC18	P18759	758 aa	Known RBP	11.12	□□□□□ -0.63
MEP3	YPR138C	OPY1	P38271	328 aa		11.12	□□□□□ -0.63
MEP3	YPR138C	SYF1	Q04048	859 aa	Predicted RBP	11.12	□□□□□ -0.63
MEP3	YPR138C	POM152	P39685	1337 aa		11.12	□□□□□ -0.63
MEP3	YPR138C	MRPS35	P53292	345 aa		11.12	□□□□□ -0.63
MEP3	YPR138C	AI2	P03876	854 aa		11.11	□□□□□ -0.63
MEP3	YPR138C	DPH6	Q12429	685 aa		11.11	□□□□□ -0.63
MEP3	YPR138C	PFF1	P38244	976 aa		11.1	□□□□□ -0.63
MEP3	YPR138C	EPS1	P40557	701 aa		11.09	□□□□□ -0.63
MEP3	YPR138C	MAP2	P38174	421 aa	Known RBP	11.08	□□□□□ -0.64
MEP3	YPR138C	HXT13	P39924	564 aa		11.08	□□□□□ -0.64
MEP3	YPR138C	YNL193W	P53870	558 aa		11.08	□□□□□ -0.64
MEP3	YPR138C	RMD1	Q03441	430 aa		11.08	□□□□□ -0.64
MEP3	YPR138C	RPN7	Q06103	429 aa	Known RBP	11.08	□□□□□ -0.64
MEP3	YPR138C	RIM20	Q12033	661 aa		11.08	□□□□□ -0.64
MEP3	YPR138C	PIF1	P07271	859 aa		11.07	□□□□□ -0.64
MEP3	YPR138C	SIT4	P20604	311 aa		11.07	□□□□□ -0.64
MEP3	YPR138C	KTR1	P27810	393 aa	Known RBP	11.07	□□□□□ -0.64
MEP3	YPR138C	NGR1	P32831	672 aa	Known RBP	11.07	□□□□□ -0.64
MEP3	YPR138C	AAP1	P37898	856 aa	Known RBP	11.07	□□□□□ -0.64
MEP3	YPR138C	ICP55	P40051	511 aa		11.07	□□□□□ -0.64
MEP3	YPR138C	IRC3	Q06683	689 aa		11.07	□□□□□ -0.64
MEP3	YPR138C	THI3	Q07471	609 aa		11.07	□□□□□ -0.64
MEP3	YPR138C	MGM1	P32266	881 aa		11.06	□□□□□ -0.64
MEP3	YPR138C	OSH3	P38713	996 aa	Known RBP	11.06	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms