RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeastyeast

Gene CBC2, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBC2YPL178W DSD1P53095 428 aa6.92□□□□□ -1.3
CBC2YPL178W ADE16P54113 591 aaKnown RBP6.92□□□□□ -1.3
CBC2YPL178W YBL086CP38177 466 aa6.91□□□□□ -1.3
CBC2YPL178W SOL3P38858 249 aa6.91□□□□□ -1.3
CBC2YPL178W NPR2P39923 615 aa6.91□□□□□ -1.3
CBC2YPL178W AI4P03878 556 aa6.9□□□□□ -1.3
CBC2YPL178W MPH3P0CE00 602 aa6.9□□□□□ -1.3
CBC2YPL178W AKL1P38080 1108 aaKnown RBP6.9□□□□□ -1.3
CBC2YPL178W LYS4P49367 693 aaPredicted RBP6.9□□□□□ -1.3
CBC2YPL178W INP54Q08227 384 aaKnown RBP6.9□□□□□ -1.3
CBC2YPL178W SPT7P35177 1332 aa6.9□□□□□ -1.3
CBC2YPL178W OSM1P21375 501 aaKnown RBP6.89□□□□□ -1.31
CBC2YPL178W PTC3P34221 468 aaKnown RBP6.89□□□□□ -1.31
CBC2YPL178W AOS1Q06624 347 aa6.89□□□□□ -1.31
CBC2YPL178W SSA2P10592 639 aaKnown RBP6.88□□□□□ -1.31
CBC2YPL178W GRX1P25373 110 aaKnown RBP6.88□□□□□ -1.31
CBC2YPL178W YBP2P53169 641 aa6.88□□□□□ -1.31
CBC2YPL178W MPC54Q08550 464 aa6.88□□□□□ -1.31
CBC2YPL178W AMS1P22855 1083 aa6.87□□□□□ -1.31
CBC2YPL178W ILV3P39522 585 aaKnown RBP6.87□□□□□ -1.31
CBC2YPL178W RTR1P40084 226 aaPredicted RBP6.87□□□□□ -1.31
CBC2YPL178W IOC4Q04213 475 aa6.87□□□□□ -1.31
CBC2YPL178W EDS1P38073 919 aa6.86□□□□□ -1.31
CBC2YPL178W NUP145P49687 1317 aa6.85□□□□□ -1.31
CBC2YPL178W KCC4P25389 1037 aa6.85□□□□□ -1.31
CBC2YPL178W ALD3P54114 506 aa6.85□□□□□ -1.31
CBC2YPL178W YPR015CQ12531 247 aa6.85□□□□□ -1.31
CBC2YPL178W RAD4P14736 754 aa6.84□□□□□ -1.31
CBC2YPL178W NTH2P35172 780 aa6.84□□□□□ -1.31
CBC2YPL178W NMA111P53920 997 aa6.84□□□□□ -1.31
CBC2YPL178W BUG1Q12191 341 aa6.84□□□□□ -1.31
CBC2YPL178W CTH1P47976 325 aa6.83□□□□□ -1.32
CBC2YPL178W RRP46P53256 223 aaPredicted RBP6.83□□□□□ -1.32
CBC2YPL178W YNL050CP53952 270 aa6.83□□□□□ -1.32
CBC2YPL178W RMT2Q03305 412 aa6.83□□□□□ -1.32
CBC2YPL178W PRD1P25375 712 aa6.82□□□□□ -1.32
CBC2YPL178W UGA3P26370 528 aa6.82□□□□□ -1.32
CBC2YPL178W NSE3Q05541 303 aa6.82□□□□□ -1.32
CBC2YPL178W UTP22P53254 1237 aaPredicted RBP6.81□□□□□ -1.32
CBC2YPL178W MDG1P53885 366 aa6.81□□□□□ -1.32
CBC2YPL178W MAM1P40065 302 aa6.8□□□□□ -1.32
CBC2YPL178W ZDS1P50111 915 aaKnown RBP6.8□□□□□ -1.32
CBC2YPL178W UTP10P42945 1769 aaKnown RBP6.8□□□□□ -1.32
CBC2YPL178W HPC2Q01448 625 aa6.79□□□□□ -1.32
CBC2YPL178W YDL144CQ07589 356 aa6.79□□□□□ -1.32
CBC2YPL178W ALE1Q08548 619 aa6.79□□□□□ -1.32
CBC2YPL178W NOP53Q12080 455 aaKnown RBP6.79□□□□□ -1.32
CBC2YPL178W SAP155P43612 1002 aa6.78□□□□□ -1.32
CBC2YPL178W MPP10P47083 593 aaKnown RBP6.78□□□□□ -1.32
CBC2YPL178W TUM1Q08686 304 aaKnown RBP6.78□□□□□ -1.32
CBC2YPL178W RRT14P40470 206 aa6.77□□□□□ -1.33
CBC2YPL178W BUD27P43573 796 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
CBC2YPL178W SSP2Q08646 371 aa6.77□□□□□ -1.33
CBC2YPL178W RPP0P05317 312 aaKnown RBP6.76□□□□□ -1.33
CBC2YPL178W TFA1P36100 482 aa6.76□□□□□ -1.33
CBC2YPL178W YFR016CP43597 1233 aaKnown RBP6.76□□□□□ -1.33
CBC2YPL178W TEA1P47988 759 aa6.76□□□□□ -1.33
CBC2YPL178W GYP7P48365 746 aa6.76□□□□□ -1.33
CBC2YPL178W THI22Q06490 572 aa6.76□□□□□ -1.33
CBC2YPL178W GYP1Q08484 637 aa6.76□□□□□ -1.33
CBC2YPL178W PHM7Q12252 991 aa6.76□□□□□ -1.33
CBC2YPL178W LYS2P07702 1392 aa6.76□□□□□ -1.33
CBC2YPL178W RAM1P22007 431 aa6.75□□□□□ -1.33
CBC2YPL178W SER1P33330 395 aaKnown RBP6.75□□□□□ -1.33
CBC2YPL178W BMS1Q08965 1183 aaKnown RBP6.75□□□□□ -1.33
CBC2YPL178W NYV1Q12255 253 aa6.75□□□□□ -1.33
CBC2YPL178W MAK11P20484 414 aaKnown RBP6.74□□□□□ -1.33
CBC2YPL178W TPD3P31383 635 aa6.74□□□□□ -1.33
CBC2YPL178W TOS1P38288 455 aa6.74□□□□□ -1.33
CBC2YPL178W SDH2P21801 266 aa6.73□□□□□ -1.33
CBC2YPL178W YBR287WP38355 427 aa6.73□□□□□ -1.33
CBC2YPL178W VPS27P40343 622 aaKnown RBP6.73□□□□□ -1.33
CBC2YPL178W DPL1Q05567 589 aa6.73□□□□□ -1.33
CBC2YPL178W RTT109Q07794 436 aa6.73□□□□□ -1.33
CBC2YPL178W COQ4O13525 335 aa6.72□□□□□ -1.33
CBC2YPL178W LPD1P09624 499 aaKnown RBP6.72□□□□□ -1.33
CBC2YPL178W MSN5P52918 1224 aa6.72□□□□□ -1.33
CBC2YPL178W YGL082WP53155 381 aa6.72□□□□□ -1.33
CBC2YPL178W CDC45Q08032 650 aa6.72□□□□□ -1.33
CBC2YPL178W RAT1Q02792 1006 aaKnown RBP6.71□□□□□ -1.34
CBC2YPL178W CTI6Q08923 506 aa6.71□□□□□ -1.34
CBC2YPL178W CTT1P06115 562 aa6.7□□□□□ -1.34
CBC2YPL178W SSA1P10591 642 aaKnown RBP6.7□□□□□ -1.34
CBC2YPL178W HEF3P53978 1044 aaKnown RBP6.7□□□□□ -1.34
CBC2YPL178W VPS64Q03944 604 aa6.7□□□□□ -1.34
CBC2YPL178W DIB1Q06819 143 aaPredicted RBP6.7□□□□□ -1.34
CBC2YPL178W RIX7Q07844 837 aaKnown RBP6.7□□□□□ -1.34
CBC2YPL178W YOL057WQ08225 711 aa6.7□□□□□ -1.34
CBC2YPL178W GAR1P28007 205 aaKnown RBP6.69□□□□□ -1.34
CBC2YPL178W YKL222CP35995 705 aa6.69□□□□□ -1.34
CBC2YPL178W EAF6P47128 113 aa6.69□□□□□ -1.34
CBC2YPL178W DNM1P54861 757 aa6.69□□□□□ -1.34
CBC2YPL178W SUI2P20459 304 aaKnown RBP6.68□□□□□ -1.34
CBC2YPL178W SLI15P38283 698 aa6.68□□□□□ -1.34
CBC2YPL178W YRB30P53107 440 aaPredicted RBP6.68□□□□□ -1.34
CBC2YPL178W SRT1Q03175 343 aa6.68□□□□□ -1.34
CBC2YPL178W IRC3Q06683 689 aa6.68□□□□□ -1.34
CBC2YPL178W MAK21Q12176 1025 aaKnown RBP6.68□□□□□ -1.34
CBC2YPL178W GBP2P25555 427 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
CBC2YPL178W APL2P36000 726 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 68.2 ms