RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	PNP1	Q05788	311 aa		5.06	□□□□□ -1.6
VAM10	YOR068C	PUN1	Q06991	263 aa		5.06	□□□□□ -1.6
VAM10	YOR068C	TRS33	Q99394	268 aa		5.06	□□□□□ -1.6
VAM10	YOR068C	SRS2	P12954	1174 aa		5.05	□□□□□ -1.6
VAM10	YOR068C	BOL3	P39724	118 aa		5.05	□□□□□ -1.6
VAM10	YOR068C	UTP7	P40055	554 aa	Known RBP	5.05	□□□□□ -1.6
VAM10	YOR068C	AAD14	P42884	376 aa		5.05	□□□□□ -1.6
VAM10	YOR068C	ALD4	P46367	519 aa	Known RBP	5.05	□□□□□ -1.6
VAM10	YOR068C	SRC1	Q03707	834 aa		5.05	□□□□□ -1.6
VAM10	YOR068C	YPQ2	Q06328	317 aa		5.05	□□□□□ -1.6
VAM10	YOR068C	NGR1	P32831	672 aa	Known RBP	5.04	□□□□□ -1.6
VAM10	YOR068C	DLD3	P39976	496 aa	Known RBP	5.04	□□□□□ -1.6
VAM10	YOR068C	YJR115W	P47152	169 aa		5.04	□□□□□ -1.6
VAM10	YOR068C	KAR5	Q04746	504 aa		5.04	□□□□□ -1.6
VAM10	YOR068C	SUM1	P46676	1062 aa		5.03	□□□□□ -1.6
VAM10	YOR068C	PTK2	P47116	818 aa	Known RBP	5.03	□□□□□ -1.6
VAM10	YOR068C	ARG82	P07250	355 aa		5.02	□□□□□ -1.61
VAM10	YOR068C	MCM1	P11746	286 aa		5.02	□□□□□ -1.61
VAM10	YOR068C	TRK1	P12685	1235 aa		5.02	□□□□□ -1.61
VAM10	YOR068C	ERP5	P38819	212 aa		5.02	□□□□□ -1.61
VAM10	YOR068C	CAB1	Q04430	367 aa		5.02	□□□□□ -1.61
VAM10	YOR068C	YBL113C	Q7M4S9	792 aa		5.02	□□□□□ -1.61
VAM10	YOR068C	DLD1	P32891	587 aa		5.01	□□□□□ -1.61
VAM10	YOR068C	CWH41	P53008	833 aa		5.01	□□□□□ -1.61
VAM10	YOR068C	FOX2	Q02207	900 aa	Known RBP	5.01	□□□□□ -1.61
VAM10	YOR068C	TRL1	P09880	827 aa	Known RBP	5	□□□□□ -1.61
VAM10	YOR068C	SLD2	P34252	453 aa		5	□□□□□ -1.61
VAM10	YOR068C	BOI1	P38041	980 aa	Known RBP	5	□□□□□ -1.61
VAM10	YOR068C	YBR197C	P38306	217 aa		5	□□□□□ -1.61
VAM10	YOR068C	HXT5	P38695	592 aa		5	□□□□□ -1.61
VAM10	YOR068C	FUR4	P05316	633 aa	Known RBP	4.99	□□□□□ -1.61
VAM10	YOR068C	ISC10	P32645	267 aa		4.99	□□□□□ -1.61
VAM10	YOR068C	SSN3	P39073	555 aa		4.99	□□□□□ -1.61
VAM10	YOR068C	ATG1	P53104	897 aa		4.99	□□□□□ -1.61
VAM10	YOR068C	SEN54	Q02825	467 aa	Predicted RBP	4.99	□□□□□ -1.61
VAM10	YOR068C	SRF1	Q12516	437 aa		4.99	□□□□□ -1.61
VAM10	YOR068C	GRS1	P38088	690 aa	Known RBP	4.98	□□□□□ -1.61
VAM10	YOR068C	MDJ2	P42834	146 aa		4.98	□□□□□ -1.61
VAM10	YOR068C	NUP85	P46673	744 aa		4.98	□□□□□ -1.61
VAM10	YOR068C	YNL165W	P53891	406 aa		4.98	□□□□□ -1.61
VAM10	YOR068C	LSO1	Q3E827	93 aa		4.98	□□□□□ -1.61
VAM10	YOR068C	SHM1	P37292	490 aa	Predicted RBP	4.97	□□□□□ -1.61
VAM10	YOR068C	GLO3	P38682	493 aa	Known RBP	4.97	□□□□□ -1.61
VAM10	YOR068C	ALA1	P40825	983 aa	Known RBP	4.97	□□□□□ -1.61
VAM10	YOR068C	BRE2	P43132	505 aa		4.97	□□□□□ -1.61
VAM10	YOR068C	JJJ2	P46997	583 aa		4.97	□□□□□ -1.61
VAM10	YOR068C	YJR098C	P47139	656 aa		4.97	□□□□□ -1.61
VAM10	YOR068C	MSN5	P52918	1224 aa		4.97	□□□□□ -1.61
VAM10	YOR068C	URN1	Q06525	465 aa	Known RBP	4.97	□□□□□ -1.61
VAM10	YOR068C	TY1A-DR3	Q12441	440 aa		4.97	□□□□□ -1.61
VAM10	YOR068C	RPB10	P22139	70 aa		4.96	□□□□□ -1.62
VAM10	YOR068C	RRN6	P32786	894 aa		4.96	□□□□□ -1.62
VAM10	YOR068C	SCD5	P34758	872 aa		4.96	□□□□□ -1.62
VAM10	YOR068C	QDR1	P40475	563 aa		4.96	□□□□□ -1.62
VAM10	YOR068C	RPS31	P05759	152 aa	Known RBP	4.95	□□□□□ -1.62
VAM10	YOR068C	MRPL33	P20084	86 aa		4.95	□□□□□ -1.62
VAM10	YOR068C	MLF3	P32047	452 aa		4.95	□□□□□ -1.62
VAM10	YOR068C	SLA1	P32790	1244 aa		4.95	□□□□□ -1.62
VAM10	YOR068C	KTR2	P33550	425 aa		4.95	□□□□□ -1.62
VAM10	YOR068C	STM1	P39015	273 aa	Known RBP	4.95	□□□□□ -1.62
VAM10	YOR068C	LSC2	P53312	427 aa		4.95	□□□□□ -1.62
VAM10	YOR068C	Q0182	Q9ZZW1	134 aa		4.95	□□□□□ -1.62
VAM10	YOR068C	YHL050C	P38721	697 aa		4.94	□□□□□ -1.62
VAM10	YOR068C	YHR219W	P38900	624 aa		4.94	□□□□□ -1.62
VAM10	YOR068C	VTC4	P47075	721 aa		4.94	□□□□□ -1.62
VAM10	YOR068C	APC11	Q12157	165 aa		4.94	□□□□□ -1.62
VAM10	YOR068C	DAL1	P32375	460 aa		4.93	□□□□□ -1.62
VAM10	YOR068C	AHP1	P38013	176 aa	Known RBP	4.93	□□□□□ -1.62
VAM10	YOR068C	IPL1	P38991	367 aa		4.93	□□□□□ -1.62
VAM10	YOR068C	ACF4	P47129	309 aa		4.93	□□□□□ -1.62
VAM10	YOR068C	NUT2	Q06213	157 aa		4.93	□□□□□ -1.62
VAM10	YOR068C	UTP4	Q06679	776 aa	Known RBP	4.93	□□□□□ -1.62
VAM10	YOR068C	TCB1	Q12466	1186 aa		4.93	□□□□□ -1.62
VAM10	YOR068C	FRT1	Q99332	602 aa		4.93	□□□□□ -1.62
VAM10	YOR068C	VMA3	P25515	160 aa		4.92	□□□□□ -1.62
VAM10	YOR068C	IRE1	P32361	1115 aa		4.92	□□□□□ -1.62
VAM10	YOR068C	MSC6	Q08818	692 aa	Known RBP	4.92	□□□□□ -1.62
VAM10	YOR068C	PSH1	Q12161	406 aa		4.92	□□□□□ -1.62
VAM10	YOR068C	PDC6	P26263	563 aa	Known RBP	4.91	□□□□□ -1.62
VAM10	YOR068C	QDR2	P40474	542 aa		4.91	□□□□□ -1.62
VAM10	YOR068C	GCR2	Q01722	534 aa		4.91	□□□□□ -1.62
VAM10	YOR068C	OPT2	Q06593	877 aa		4.91	□□□□□ -1.62
VAM10	YOR068C	AIM44	Q99299	758 aa		4.91	□□□□□ -1.62
VAM10	YOR068C	CDC19	P00549	500 aa	Known RBP	4.9	□□□□□ -1.63
VAM10	YOR068C	SEC20	P28791	383 aa		4.9	□□□□□ -1.63
VAM10	YOR068C	YTA6	P40328	754 aa		4.9	□□□□□ -1.63
VAM10	YOR068C	SPR3	P41901	512 aa		4.9	□□□□□ -1.63
VAM10	YOR068C	ALD2	P47771	506 aa		4.9	□□□□□ -1.63
VAM10	YOR068C	SUT1	P53032	299 aa	Known RBP	4.9	□□□□□ -1.63
VAM10	YOR068C	WHI5	Q12416	295 aa		4.9	□□□□□ -1.63
VAM10	YOR068C	PPX1	P38698	397 aa		4.89	□□□□□ -1.63
VAM10	YOR068C	NOP7	P53261	605 aa	Known RBP	4.89	□□□□□ -1.63
VAM10	YOR068C	LEU1	P07264	779 aa	Known RBP	4.88	□□□□□ -1.63
VAM10	YOR068C	GLY1	P37303	387 aa	Known RBP	4.88	□□□□□ -1.63
VAM10	YOR068C	UBP15	P50101	1230 aa		4.88	□□□□□ -1.63
VAM10	YOR068C	UBP2	Q01476	1272 aa		4.88	□□□□□ -1.63
VAM10	YOR068C	TRS120	Q04183	1289 aa		4.88	□□□□□ -1.63
VAM10	YOR068C	YLR346C	Q06139	101 aa		4.88	□□□□□ -1.63
VAM10	YOR068C	RPC31	P17890	251 aa		4.87	□□□□□ -1.63
VAM10	YOR068C	HEM3	P28789	327 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms