RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C ALA1P40825 983 aaKnown RBP4.44□□□□□ -1.7
RPB11YOL005C AAD14P42884 376 aa4.44□□□□□ -1.7
RPB11YOL005C CYT1P07143 309 aa4.43□□□□□ -1.7
RPB11YOL005C PUN1Q06991 263 aa4.43□□□□□ -1.7
RPB11YOL005C TRS33Q99394 268 aa4.41□□□□□ -1.7
RPB11YOL005C SUM1P46676 1062 aa4.4□□□□□ -1.71
RPB11YOL005C CWH41P53008 833 aa4.4□□□□□ -1.71
RPB11YOL005C LSC2P53312 427 aa4.4□□□□□ -1.71
RPB11YOL005C PUF6Q04373 656 aaKnown RBP4.4□□□□□ -1.71
RPB11YOL005C CDC3P32457 520 aaKnown RBP4.39□□□□□ -1.71
RPB11YOL005C NUP85P46673 744 aa4.39□□□□□ -1.71
RPB11YOL005C FOX2Q02207 900 aaKnown RBP4.39□□□□□ -1.71
RPB11YOL005C AHP1P38013 176 aaKnown RBP4.38□□□□□ -1.71
RPB11YOL005C TPS3P38426 1054 aaKnown RBP4.38□□□□□ -1.71
RPB11YOL005C ALD4P46367 519 aaKnown RBP4.38□□□□□ -1.71
RPB11YOL005C YJR098CP47139 656 aa4.38□□□□□ -1.71
RPB11YOL005C KAR5Q04746 504 aa4.38□□□□□ -1.71
RPB11YOL005C YLR346CQ06139 101 aa4.38□□□□□ -1.71
RPB11YOL005C TCB1Q12466 1186 aa4.38□□□□□ -1.71
RPB11YOL005C PNP1Q05788 311 aa4.37□□□□□ -1.71
RPB11YOL005C HAT1Q12341 374 aa4.37□□□□□ -1.71
RPB11YOL005C FUR4P05316 633 aaKnown RBP4.36□□□□□ -1.71
RPB11YOL005C SRS2P12954 1174 aa4.36□□□□□ -1.71
RPB11YOL005C UBP1P25037 809 aa4.36□□□□□ -1.71
RPB11YOL005C NGR1P32831 672 aaKnown RBP4.36□□□□□ -1.71
RPB11YOL005C CWC15Q03772 175 aaKnown RBP4.36□□□□□ -1.71
RPB11YOL005C OPT2Q06593 877 aa4.36□□□□□ -1.71
RPB11YOL005C SSN3P39073 555 aa4.35□□□□□ -1.71
RPB11YOL005C UBP2Q01476 1272 aa4.35□□□□□ -1.71
RPB11YOL005C Q0182Q9ZZW1 134 aa4.35□□□□□ -1.71
RPB11YOL005C GAR1P28007 205 aaKnown RBP4.34□□□□□ -1.71
RPB11YOL005C SUV3P32580 737 aa4.34□□□□□ -1.71
RPB11YOL005C RRN6P32786 894 aa4.34□□□□□ -1.71
RPB11YOL005C RGA1P39083 1007 aa4.34□□□□□ -1.71
RPB11YOL005C JJJ2P46997 583 aa4.34□□□□□ -1.71
RPB11YOL005C MSN5P52918 1224 aa4.34□□□□□ -1.71
RPB11YOL005C YDR444WQ04093 687 aa4.34□□□□□ -1.71
RPB11YOL005C YPQ2Q06328 317 aa4.34□□□□□ -1.71
RPB11YOL005C MCM1P11746 286 aa4.33□□□□□ -1.72
RPB11YOL005C ISC10P32645 267 aa4.33□□□□□ -1.72
RPB11YOL005C YTA6P40328 754 aa4.33□□□□□ -1.72
RPB11YOL005C SCW11P53189 542 aa4.33□□□□□ -1.72
RPB11YOL005C GBP2P25555 427 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
RPB11YOL005C MLF3P32047 452 aa4.32□□□□□ -1.72
RPB11YOL005C MET22P32179 357 aa4.32□□□□□ -1.72
RPB11YOL005C IRE1P32361 1115 aa4.32□□□□□ -1.72
RPB11YOL005C GRS1P38088 690 aaKnown RBP4.32□□□□□ -1.72
RPB11YOL005C YBR197CP38306 217 aa4.32□□□□□ -1.72
RPB11YOL005C GLO3P38682 493 aaKnown RBP4.32□□□□□ -1.72
RPB11YOL005C YNL165WP53891 406 aa4.32□□□□□ -1.72
RPB11YOL005C DAL1P32375 460 aa4.31□□□□□ -1.72
RPB11YOL005C SCD5P34758 872 aa4.31□□□□□ -1.72
RPB11YOL005C SHM1P37292 490 aaPredicted RBP4.31□□□□□ -1.72
RPB11YOL005C BOL3P39724 118 aa4.31□□□□□ -1.72
RPB11YOL005C YML020WQ03722 664 aa4.31□□□□□ -1.72
RPB11YOL005C CAB1Q04430 367 aa4.31□□□□□ -1.72
RPB11YOL005C LCB5Q06147 687 aaKnown RBP4.31□□□□□ -1.72
RPB11YOL005C TY1A-DR3Q12441 440 aa4.31□□□□□ -1.72
RPB11YOL005C YBL113CQ7M4S9 792 aa4.31□□□□□ -1.72
RPB11YOL005C HXT5P38695 592 aa4.3□□□□□ -1.72
RPB11YOL005C OSH7P38755 437 aa4.3□□□□□ -1.72
RPB11YOL005C SUT1P53032 299 aaKnown RBP4.3□□□□□ -1.72
RPB11YOL005C MTO1P53070 669 aa4.3□□□□□ -1.72
RPB11YOL005C GLY1P37303 387 aaKnown RBP4.29□□□□□ -1.72
RPB11YOL005C QDR1P40475 563 aa4.29□□□□□ -1.72
RPB11YOL005C VTC4P47075 721 aa4.29□□□□□ -1.72
RPB11YOL005C TY1A-BLQ12266 440 aa4.29□□□□□ -1.72
RPB11YOL005C CDC19P00549 500 aaKnown RBP4.28□□□□□ -1.72
RPB11YOL005C MRPL33P20084 86 aa4.28□□□□□ -1.72
RPB11YOL005C PDC6P26263 563 aaKnown RBP4.28□□□□□ -1.72
RPB11YOL005C SLA1P32790 1244 aa4.28□□□□□ -1.72
RPB11YOL005C SSF1P38789 453 aaPredicted RBP4.28□□□□□ -1.72
RPB11YOL005C ERP5P38819 212 aa4.28□□□□□ -1.72
RPB11YOL005C UBP15P50101 1230 aa4.28□□□□□ -1.72
RPB11YOL005C CAF120P53836 1060 aa4.28□□□□□ -1.72
RPB11YOL005C PSH1Q12161 406 aa4.28□□□□□ -1.72
RPB11YOL005C RPS31P05759 152 aaKnown RBP4.27□□□□□ -1.73
RPB11YOL005C VMA3P25515 160 aa4.27□□□□□ -1.73
RPB11YOL005C QDR2P40474 542 aa4.27□□□□□ -1.73
RPB11YOL005C SLD2P34252 453 aa4.26□□□□□ -1.73
RPB11YOL005C BOI1P38041 980 aaKnown RBP4.26□□□□□ -1.73
RPB11YOL005C LDH1P38139 375 aa4.26□□□□□ -1.73
RPB11YOL005C STB3Q12427 513 aa4.26□□□□□ -1.73
RPB11YOL005C RPB10P22139 70 aa4.25□□□□□ -1.73
RPB11YOL005C KAP122P32767 1081 aa4.25□□□□□ -1.73
RPB11YOL005C MRPL16P38064 232 aa4.25□□□□□ -1.73
RPB11YOL005C DYS1P38791 387 aa4.25□□□□□ -1.73
RPB11YOL005C YIR007WP40566 764 aa4.25□□□□□ -1.73
RPB11YOL005C ROG3P43602 733 aa4.25□□□□□ -1.73
RPB11YOL005C ATG1P53104 897 aa4.25□□□□□ -1.73
RPB11YOL005C UTP4Q06679 776 aaKnown RBP4.25□□□□□ -1.73
RPB11YOL005C LSO1Q3E827 93 aa4.25□□□□□ -1.73
RPB11YOL005C YHL050CP38721 697 aa4.24□□□□□ -1.73
RPB11YOL005C YHR219WP38900 624 aa4.24□□□□□ -1.73
RPB11YOL005C FIR1P40020 876 aa4.24□□□□□ -1.73
RPB11YOL005C THI12P42883 340 aa4.24□□□□□ -1.73
RPB11YOL005C THI5P43534 340 aa4.24□□□□□ -1.73
RPB11YOL005C THI11P47183 340 aa4.24□□□□□ -1.73
RPB11YOL005C NAM8Q00539 523 aaKnown RBP4.24□□□□□ -1.73
RPB11YOL005C YMR265CQ03508 461 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms