RNA–Protein interactions for RNA: YNL154C

YCK2, Transcript of Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform, yeast

Gene YCK2, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCK2	YNL154C	SRF1	Q12516	437 aa		4.64	□□□□□ -1.67
YCK2	YNL154C	CYT1	P07143	309 aa		4.64	□□□□□ -1.67
YCK2	YNL154C	UBP1	P25037	809 aa		4.64	□□□□□ -1.67
YCK2	YNL154C	GCR2	Q01722	534 aa		4.64	□□□□□ -1.67
YCK2	YNL154C	CDC3	P32457	520 aa	Known RBP	4.63	□□□□□ -1.67
YCK2	YNL154C	BRE2	P43132	505 aa		4.63	□□□□□ -1.67
YCK2	YNL154C	NUP85	P46673	744 aa		4.63	□□□□□ -1.67
YCK2	YNL154C	CWC15	Q03772	175 aa	Known RBP	4.63	□□□□□ -1.67
YCK2	YNL154C	TRS33	Q99394	268 aa		4.63	□□□□□ -1.67
YCK2	YNL154C	SUM1	P46676	1062 aa		4.62	□□□□□ -1.67
YCK2	YNL154C	YPQ2	Q06328	317 aa		4.61	□□□□□ -1.67
YCK2	YNL154C	MCM1	P11746	286 aa		4.61	□□□□□ -1.67
YCK2	YNL154C	SRS2	P12954	1174 aa		4.61	□□□□□ -1.67
YCK2	YNL154C	NGR1	P32831	672 aa	Known RBP	4.61	□□□□□ -1.67
YCK2	YNL154C	UTP7	P40055	554 aa	Known RBP	4.61	□□□□□ -1.67
YCK2	YNL154C	CWH41	P53008	833 aa		4.61	□□□□□ -1.67
YCK2	YNL154C	LSC2	P53312	427 aa		4.6	□□□□□ -1.67
YCK2	YNL154C	PUN1	Q06991	263 aa		4.6	□□□□□ -1.67
YCK2	YNL154C	YJR098C	P47139	656 aa		4.59	□□□□□ -1.67
YCK2	YNL154C	MSN5	P52918	1224 aa		4.59	□□□□□ -1.67
YCK2	YNL154C	SUV3	P32580	737 aa		4.58	□□□□□ -1.68
YCK2	YNL154C	DLD1	P32891	587 aa		4.58	□□□□□ -1.68
YCK2	YNL154C	SSN3	P39073	555 aa		4.58	□□□□□ -1.68
YCK2	YNL154C	VTC4	P47075	721 aa		4.58	□□□□□ -1.68
YCK2	YNL154C	PNP1	Q05788	311 aa		4.58	□□□□□ -1.68
YCK2	YNL154C	YLR346C	Q06139	101 aa		4.58	□□□□□ -1.68
YCK2	YNL154C	DAL1	P32375	460 aa		4.57	□□□□□ -1.68
YCK2	YNL154C	TPS3	P38426	1054 aa	Known RBP	4.57	□□□□□ -1.68
YCK2	YNL154C	ALA1	P40825	983 aa	Known RBP	4.57	□□□□□ -1.68
YCK2	YNL154C	ALD4	P46367	519 aa	Known RBP	4.57	□□□□□ -1.68
YCK2	YNL154C	SCD5	P34758	872 aa		4.55	□□□□□ -1.68
YCK2	YNL154C	AHP1	P38013	176 aa	Known RBP	4.55	□□□□□ -1.68
YCK2	YNL154C	HXT5	P38695	592 aa		4.55	□□□□□ -1.68
YCK2	YNL154C	JJJ2	P46997	583 aa		4.55	□□□□□ -1.68
YCK2	YNL154C	UBP2	Q01476	1272 aa		4.55	□□□□□ -1.68
YCK2	YNL154C	OPT2	Q06593	877 aa		4.55	□□□□□ -1.68
YCK2	YNL154C	TCB1	Q12466	1186 aa		4.55	□□□□□ -1.68
YCK2	YNL154C	RRN6	P32786	894 aa		4.54	□□□□□ -1.68
YCK2	YNL154C	SLA1	P32790	1244 aa		4.54	□□□□□ -1.68
YCK2	YNL154C	GLY1	P37303	387 aa	Known RBP	4.54	□□□□□ -1.68
YCK2	YNL154C	YBR197C	P38306	217 aa		4.54	□□□□□ -1.68
YCK2	YNL154C	KAR5	Q04746	504 aa		4.54	□□□□□ -1.68
YCK2	YNL154C	HAT1	Q12341	374 aa		4.54	□□□□□ -1.68
YCK2	YNL154C	FUR4	P05316	633 aa	Known RBP	4.54	□□□□□ -1.68
YCK2	YNL154C	MET22	P32179	357 aa		4.54	□□□□□ -1.68
YCK2	YNL154C	CAB1	Q04430	367 aa		4.54	□□□□□ -1.68
YCK2	YNL154C	UTP4	Q06679	776 aa	Known RBP	4.54	□□□□□ -1.68
YCK2	YNL154C	LSO1	Q3E827	93 aa		4.54	□□□□□ -1.68
YCK2	YNL154C	IRE1	P32361	1115 aa		4.53	□□□□□ -1.68
YCK2	YNL154C	SHM1	P37292	490 aa	Predicted RBP	4.53	□□□□□ -1.68
YCK2	YNL154C	SSF1	P38789	453 aa	Predicted RBP	4.53	□□□□□ -1.68
YCK2	YNL154C	BOL3	P39724	118 aa		4.53	□□□□□ -1.68
YCK2	YNL154C	TY1A-DR3	Q12441	440 aa		4.53	□□□□□ -1.68
YCK2	YNL154C	Q0182	Q9ZZW1	134 aa		4.53	□□□□□ -1.68
YCK2	YNL154C	RPS31	P05759	152 aa	Known RBP	4.52	□□□□□ -1.69
YCK2	YNL154C	ISC10	P32645	267 aa		4.52	□□□□□ -1.69
YCK2	YNL154C	SCW11	P53189	542 aa		4.52	□□□□□ -1.69
YCK2	YNL154C	YNL165W	P53891	406 aa		4.52	□□□□□ -1.69
YCK2	YNL154C	FOX2	Q02207	900 aa	Known RBP	4.52	□□□□□ -1.69
YCK2	YNL154C	YML020W	Q03722	664 aa		4.52	□□□□□ -1.69
YCK2	YNL154C	LCB5	Q06147	687 aa	Known RBP	4.52	□□□□□ -1.69
YCK2	YNL154C	CDC19	P00549	500 aa	Known RBP	4.51	□□□□□ -1.69
YCK2	YNL154C	OSH7	P38755	437 aa		4.51	□□□□□ -1.69
YCK2	YNL154C	YTA6	P40328	754 aa		4.51	□□□□□ -1.69
YCK2	YNL154C	UBP15	P50101	1230 aa		4.51	□□□□□ -1.69
YCK2	YNL154C	ATG1	P53104	897 aa		4.51	□□□□□ -1.69
YCK2	YNL154C	YDR444W	Q04093	687 aa		4.51	□□□□□ -1.69
YCK2	YNL154C	NOP8	Q08287	484 aa	Predicted RBP	4.51	□□□□□ -1.69
YCK2	YNL154C	TY1A-BL	Q12266	440 aa		4.51	□□□□□ -1.69
YCK2	YNL154C	YBL113C	Q7M4S9	792 aa		4.51	□□□□□ -1.69
YCK2	YNL154C	TRL1	P09880	827 aa	Known RBP	4.5	□□□□□ -1.69
YCK2	YNL154C	MRPL33	P20084	86 aa		4.5	□□□□□ -1.69
YCK2	YNL154C	MLF3	P32047	452 aa		4.5	□□□□□ -1.69
YCK2	YNL154C	ERP5	P38819	212 aa		4.5	□□□□□ -1.69
YCK2	YNL154C	PDC6	P26263	563 aa	Known RBP	4.5	□□□□□ -1.69
YCK2	YNL154C	GAR1	P28007	205 aa	Known RBP	4.5	□□□□□ -1.69
YCK2	YNL154C	BOI1	P38041	980 aa	Known RBP	4.5	□□□□□ -1.69
YCK2	YNL154C	PSH1	Q12161	406 aa		4.5	□□□□□ -1.69
YCK2	YNL154C	LEU1	P07264	779 aa	Known RBP	4.49	□□□□□ -1.69
YCK2	YNL154C	SLD2	P34252	453 aa		4.49	□□□□□ -1.69
YCK2	YNL154C	ACF4	P47129	309 aa		4.49	□□□□□ -1.69
YCK2	YNL154C	APC11	Q12157	165 aa		4.49	□□□□□ -1.69
YCK2	YNL154C	VMA3	P25515	160 aa		4.48	□□□□□ -1.69
YCK2	YNL154C	GLO3	P38682	493 aa	Known RBP	4.48	□□□□□ -1.69
YCK2	YNL154C	STM1	P39015	273 aa	Known RBP	4.48	□□□□□ -1.69
YCK2	YNL154C	QDR1	P40475	563 aa		4.48	□□□□□ -1.69
YCK2	YNL154C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.47	□□□□□ -1.69	not detected
YCK2	YNL154C	KAP122	P32767	1081 aa		4.47	□□□□□ -1.69
YCK2	YNL154C	LDH1	P38139	375 aa		4.47	□□□□□ -1.69
YCK2	YNL154C	MDJ2	P42834	146 aa		4.47	□□□□□ -1.69
YCK2	YNL154C	GRS1	P38088	690 aa	Known RBP	4.46	□□□□□ -1.69
YCK2	YNL154C	DYS1	P38791	387 aa		4.46	□□□□□ -1.69
YCK2	YNL154C	ACO2	P39533	789 aa		4.46	□□□□□ -1.69
YCK2	YNL154C	QDR2	P40474	542 aa		4.46	□□□□□ -1.69
YCK2	YNL154C	SPR3	P41901	512 aa		4.46	□□□□□ -1.69
YCK2	YNL154C	ALD2	P47771	506 aa		4.46	□□□□□ -1.69
YCK2	YNL154C	NAM8	Q00539	523 aa	Known RBP	4.46	□□□□□ -1.69
YCK2	YNL154C	MTO1	P53070	669 aa		4.46	□□□□□ -1.7
YCK2	YNL154C	RGP1	P16664	663 aa		4.45	□□□□□ -1.7
YCK2	YNL154C	ROG3	P43602	733 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms