RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C THI72Q08579 599 aa8.13□□□□□ -1.11
VPS20YMR077C SUM1P46676 1062 aa8.12□□□□□ -1.11
VPS20YMR077C ADE12P80210 433 aaKnown RBP8.12□□□□□ -1.11
VPS20YMR077C SOH1P38633 127 aa8.11□□□□□ -1.11
VPS20YMR077C KRE33P53914 1056 aaKnown RBP8.11□□□□□ -1.11
VPS20YMR077C TY1A-DR3Q12441 440 aa8.11□□□□□ -1.11
VPS20YMR077C ALA1P40825 983 aaKnown RBP8.1□□□□□ -1.11
VPS20YMR077C SUP45P12385 437 aaKnown RBP8.09□□□□□ -1.11
VPS20YMR077C PKC1P24583 1151 aa8.09□□□□□ -1.11
VPS20YMR077C UTP7P40055 554 aaKnown RBP8.09□□□□□ -1.11
VPS20YMR077C SLX8P40072 274 aa8.09□□□□□ -1.11
VPS20YMR077C YFL066CP43538 392 aa8.09□□□□□ -1.11
VPS20YMR077C HDA3Q06623 655 aa8.09□□□□□ -1.11
VPS20YMR077C BIO2P32451 375 aa8.08□□□□□ -1.12
VPS20YMR077C JJJ2P46997 583 aa8.07□□□□□ -1.12
VPS20YMR077C IRE1P32361 1115 aa8.05□□□□□ -1.12
VPS20YMR077C YNL108CP53929 270 aa8.04□□□□□ -1.12
VPS20YMR077C ENO2P00925 437 aaKnown RBP8.03□□□□□ -1.12
VPS20YMR077C YPR053CQ6Q5F3 151 aa8.02□□□□□ -1.13
VPS20YMR077C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
VPS20YMR077C FPS1P23900 669 aa8□□□□□ -1.13
VPS20YMR077C CCT8P47079 568 aaKnown RBP8□□□□□ -1.13
VPS20YMR077C RIM21P48565 533 aa8□□□□□ -1.13
VPS20YMR077C SHM1P37292 490 aaPredicted RBP7.98□□□□□ -1.13
VPS20YMR077C YFL034WP43564 1073 aa7.98□□□□□ -1.13
VPS20YMR077C SWI5P08153 709 aa7.97□□□□□ -1.13
VPS20YMR077C GPM1P00950 247 aaKnown RBP7.96□□□□□ -1.14
VPS20YMR077C PDC6P26263 563 aaKnown RBP7.96□□□□□ -1.14
VPS20YMR077C AIM9P40053 627 aaKnown RBP7.96□□□□□ -1.14
VPS20YMR077C YPQ2Q06328 317 aa7.96□□□□□ -1.14
VPS20YMR077C TDA6Q06466 467 aa7.96□□□□□ -1.14
VPS20YMR077C PSH1Q12161 406 aa7.96□□□□□ -1.14
VPS20YMR077C MRPL16P38064 232 aa7.95□□□□□ -1.14
VPS20YMR077C SKN7P38889 622 aa7.95□□□□□ -1.14
VPS20YMR077C SBE2P42223 864 aaKnown RBP7.95□□□□□ -1.14
VPS20YMR077C HGH1P48362 394 aaKnown RBP7.95□□□□□ -1.14
VPS20YMR077C YNR014WP53719 212 aa7.95□□□□□ -1.14
VPS20YMR077C YMR187CQ03236 431 aa7.95□□□□□ -1.14
VPS20YMR077C RPP1AP05318 106 aaPredicted RBP7.94□□□□□ -1.14
VPS20YMR077C YJL007CP47080 104 aa7.94□□□□□ -1.14
VPS20YMR077C RDS2P19541 446 aaKnown RBP7.93□□□□□ -1.14
VPS20YMR077C MCX1P38323 520 aaPredicted RBP7.93□□□□□ -1.14
VPS20YMR077C MCM1P11746 286 aa7.92□□□□□ -1.14
VPS20YMR077C STB3Q12427 513 aa7.92□□□□□ -1.14
VPS20YMR077C RPS6AP0CX37 236 aaKnown RBP7.91□□□□□ -1.14
VPS20YMR077C RPS6BP0CX38 236 aaPredicted RBP7.91□□□□□ -1.14
VPS20YMR077C MET1P36150 593 aa7.91□□□□□ -1.14
VPS20YMR077C RPS31P05759 152 aaKnown RBP7.9□□□□□ -1.14
VPS20YMR077C KNS1P32350 737 aaPredicted RBP7.9□□□□□ -1.14
VPS20YMR077C SPR3P41901 512 aa7.9□□□□□ -1.14
VPS20YMR077C LEU1P07264 779 aaKnown RBP7.89□□□□□ -1.15
VPS20YMR077C BOI2P39969 1040 aa7.89□□□□□ -1.15
VPS20YMR077C MRX10Q05648 414 aa7.89□□□□□ -1.15
VPS20YMR077C YTA6P40328 754 aa7.88□□□□□ -1.15
VPS20YMR077C PDC5P16467 563 aaKnown RBP7.87□□□□□ -1.15
VPS20YMR077C NTH2P35172 780 aa7.87□□□□□ -1.15
VPS20YMR077C TSC13Q99190 310 aa7.87□□□□□ -1.15
VPS20YMR077C SBP1P10080 294 aaKnown RBP7.85□□□□□ -1.15
VPS20YMR077C BIM1P40013 344 aa7.85□□□□□ -1.15
VPS20YMR077C RPL34BP40525 121 aaKnown RBP7.85□□□□□ -1.15
VPS20YMR077C TY1A-DR2Q03964 440 aaKnown RBP7.85□□□□□ -1.15
VPS20YMR077C ENO1P00924 437 aaKnown RBP7.84□□□□□ -1.15
VPS20YMR077C TIF1P10081 395 aaKnown RBP7.84□□□□□ -1.15
VPS20YMR077C RGP1P16664 663 aa7.83□□□□□ -1.16
VPS20YMR077C PDI1P17967 522 aaKnown RBP7.83□□□□□ -1.16
VPS20YMR077C RTG2P32608 588 aaKnown RBP7.83□□□□□ -1.16
VPS20YMR077C ALD2P47771 506 aa7.83□□□□□ -1.16
VPS20YMR077C NRD1P53617 575 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
VPS20YMR077C ATG32P40458 529 aa7.82□□□□□ -1.16
VPS20YMR077C YNL165WP53891 406 aa7.81□□□□□ -1.16
VPS20YMR077C CYT1P07143 309 aa7.8□□□□□ -1.16
VPS20YMR077C YCK2P23292 546 aaKnown RBP7.8□□□□□ -1.16
VPS20YMR077C PEP12P32854 288 aa7.8□□□□□ -1.16
VPS20YMR077C YDR215CQ12240 137 aa7.8□□□□□ -1.16
VPS20YMR077C Q0182Q9ZZW1 134 aa7.79□□□□□ -1.16
VPS20YMR077C MLF3P32047 452 aa7.78□□□□□ -1.16
VPS20YMR077C MSC7P38694 644 aa7.78□□□□□ -1.16
VPS20YMR077C HEH2Q03281 663 aa7.78□□□□□ -1.16
VPS20YMR077C UTP4Q06679 776 aaKnown RBP7.77□□□□□ -1.17
VPS20YMR077C TAT1P38085 619 aa7.75□□□□□ -1.17
VPS20YMR077C HAP4P14064 554 aa7.74□□□□□ -1.17
VPS20YMR077C UBP1P25037 809 aa7.74□□□□□ -1.17
VPS20YMR077C PHO87P25360 923 aa7.74□□□□□ -1.17
VPS20YMR077C SIS2P36024 562 aa7.74□□□□□ -1.17
VPS20YMR077C SLN1P39928 1220 aaPredicted RBP7.74□□□□□ -1.17
VPS20YMR077C AMN1P38285 549 aaPredicted RBP7.73□□□□□ -1.17
VPS20YMR077C GAS4Q08271 471 aa7.73□□□□□ -1.17
VPS20YMR077C SCD5P34758 872 aa7.72□□□□□ -1.17
VPS20YMR077C ACS2P52910 683 aaKnown RBP7.72□□□□□ -1.17
VPS20YMR077C MTO1P53070 669 aa7.72□□□□□ -1.17
VPS20YMR077C LSB6P42951 607 aa7.71□□□□□ -1.18
VPS20YMR077C SKP1P52286 194 aa7.71□□□□□ -1.18
VPS20YMR077C NCL1P38205 684 aaKnown RBP7.7□□□□□ -1.18
VPS20YMR077C NHA1Q99271 985 aa7.7□□□□□ -1.18
VPS20YMR077C TPS3P38426 1054 aaKnown RBP7.69□□□□□ -1.18
VPS20YMR077C MCA1Q08601 432 aa7.69□□□□□ -1.18
VPS20YMR077C KAP122P32767 1081 aa7.67□□□□□ -1.18
VPS20YMR077C NGR1P32831 672 aaKnown RBP7.67□□□□□ -1.18
VPS20YMR077C ALG14P38242 237 aa7.67□□□□□ -1.18
VPS20YMR077C KTR7P40504 517 aa7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms