RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C CYT1P07143 309 aa8.91□□□□□ -0.98
PEX12YMR026C VAN1P23642 535 aa8.91□□□□□ -0.98
PEX12YMR026C GEF1P37020 779 aa8.91□□□□□ -0.98
PEX12YMR026C SUM1P46676 1062 aa8.91□□□□□ -0.98
PEX12YMR026C LSC2P53312 427 aa8.91□□□□□ -0.98
PEX12YMR026C YJR098CP47139 656 aa8.9□□□□□ -0.98
PEX12YMR026C UBP1P25037 809 aa8.89□□□□□ -0.99
PEX12YMR026C PUF6Q04373 656 aaKnown RBP8.89□□□□□ -0.99
PEX12YMR026C YPQ2Q06328 317 aa8.88□□□□□ -0.99
PEX12YMR026C SSN3P39073 555 aa8.87□□□□□ -0.99
PEX12YMR026C YLR346CQ06139 101 aa8.87□□□□□ -0.99
PEX12YMR026C CWC15Q03772 175 aaKnown RBP8.86□□□□□ -0.99
PEX12YMR026C OPT2Q06593 877 aa8.86□□□□□ -0.99
PEX12YMR026C TRS33Q99394 268 aa8.86□□□□□ -0.99
PEX12YMR026C MET22P32179 357 aa8.85□□□□□ -0.99
PEX12YMR026C NGR1P32831 672 aaKnown RBP8.85□□□□□ -0.99
PEX12YMR026C ALA1P40825 983 aaKnown RBP8.85□□□□□ -0.99
PEX12YMR026C MSN5P52918 1224 aa8.85□□□□□ -0.99
PEX12YMR026C TCB1Q12466 1186 aa8.85□□□□□ -0.99
PEX12YMR026C MCM1P11746 286 aa8.84□□□□□ -0.99
PEX12YMR026C DAL1P32375 460 aa8.84□□□□□ -0.99
PEX12YMR026C VTC4P47075 721 aa8.84□□□□□ -0.99
PEX12YMR026C UBP2Q01476 1272 aa8.83□□□□□ -1
PEX12YMR026C PUN1Q06991 263 aa8.83□□□□□ -1
PEX12YMR026C SUV3P32580 737 aa8.82□□□□□ -1
PEX12YMR026C CWH41P53008 833 aa8.82□□□□□ -1
PEX12YMR026C YDR444WQ04093 687 aa8.82□□□□□ -1
PEX12YMR026C GLY1P37303 387 aaKnown RBP8.81□□□□□ -1
PEX12YMR026C LCB5Q06147 687 aaKnown RBP8.81□□□□□ -1
PEX12YMR026C SRS2P12954 1174 aa8.8□□□□□ -1
PEX12YMR026C TPS3P38426 1054 aaKnown RBP8.8□□□□□ -1
PEX12YMR026C CDC3P32457 520 aaKnown RBP8.79□□□□□ -1
PEX12YMR026C SLA1P32790 1244 aa8.79□□□□□ -1
PEX12YMR026C JJJ2P46997 583 aa8.79□□□□□ -1
PEX12YMR026C ALD4P46367 519 aaKnown RBP8.78□□□□□ -1
PEX12YMR026C PNP1Q05788 311 aa8.78□□□□□ -1
PEX12YMR026C AHP1P38013 176 aaKnown RBP8.77□□□□□ -1.01
PEX12YMR026C SCW11P53189 542 aa8.77□□□□□ -1.01
PEX12YMR026C TY1A-DR3Q12441 440 aa8.77□□□□□ -1.01
PEX12YMR026C SHM1P37292 490 aaPredicted RBP8.76□□□□□ -1.01
PEX12YMR026C TY1A-BLQ12266 440 aa8.76□□□□□ -1.01
PEX12YMR026C IRE1P32361 1115 aa8.75□□□□□ -1.01
PEX12YMR026C HXT5P38695 592 aa8.75□□□□□ -1.01
PEX12YMR026C OSH7P38755 437 aa8.75□□□□□ -1.01
PEX12YMR026C YNL165WP53891 406 aa8.75□□□□□ -1.01
PEX12YMR026C CDC19P00549 500 aaKnown RBP8.74□□□□□ -1.01
PEX12YMR026C RPS31P05759 152 aaKnown RBP8.74□□□□□ -1.01
PEX12YMR026C Q0182Q9ZZW1 134 aa8.74□□□□□ -1.01
PEX12YMR026C SCD5P34758 872 aa8.73□□□□□ -1.01
PEX12YMR026C YBR197CP38306 217 aa8.73□□□□□ -1.01
PEX12YMR026C CAB1Q04430 367 aa8.73□□□□□ -1.01
PEX12YMR026C UBP15P50101 1230 aa8.71□□□□□ -1.02
PEX12YMR026C GAR1P28007 205 aaKnown RBP8.7□□□□□ -1.02
PEX12YMR026C MLF3P32047 452 aa8.7□□□□□ -1.02
PEX12YMR026C FOX2Q02207 900 aaKnown RBP8.7□□□□□ -1.02
PEX12YMR026C UTP4Q06679 776 aaKnown RBP8.7□□□□□ -1.02
PEX12YMR026C RRN6P32786 894 aa8.69□□□□□ -1.02
PEX12YMR026C KAR5Q04746 504 aa8.69□□□□□ -1.02
PEX12YMR026C PSH1Q12161 406 aa8.69□□□□□ -1.02
PEX12YMR026C FUR4P05316 633 aaKnown RBP8.68□□□□□ -1.02
PEX12YMR026C PDC6P26263 563 aaKnown RBP8.68□□□□□ -1.02
PEX12YMR026C ISC10P32645 267 aa8.68□□□□□ -1.02
PEX12YMR026C ACO2P39533 789 aa8.68□□□□□ -1.02
PEX12YMR026C BOL3P39724 118 aa8.68□□□□□ -1.02
PEX12YMR026C YTA6P40328 754 aa8.68□□□□□ -1.02
PEX12YMR026C HAT1Q12341 374 aa8.68□□□□□ -1.02
PEX12YMR026C RGA1P39083 1007 aa8.67□□□□□ -1.02
PEX12YMR026C NAM8Q00539 523 aaKnown RBP8.67□□□□□ -1.02
PEX12YMR026C MRPL33P20084 86 aa8.66□□□□□ -1.02
PEX12YMR026C ROG3P43602 733 aa8.65□□□□□ -1.02
PEX12YMR026C LSO1Q3E827 93 aa8.65□□□□□ -1.02
PEX12YMR026C LEU1P07264 779 aaKnown RBP8.64□□□□□ -1.03
PEX12YMR026C TY1A-MR1Q04215 440 aa8.64□□□□□ -1.03
PEX12YMR026C BOI1P38041 980 aaKnown RBP8.63□□□□□ -1.03
PEX12YMR026C YIR007WP40566 764 aa8.63□□□□□ -1.03
PEX12YMR026C CAF120P53836 1060 aa8.63□□□□□ -1.03
PEX12YMR026C VMA3P25515 160 aa8.62□□□□□ -1.03
PEX12YMR026C ALD2P47771 506 aa8.62□□□□□ -1.03
PEX12YMR026C GBP2P25555 427 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
PEX12YMR026C KAP122P32767 1081 aa8.61□□□□□ -1.03
PEX12YMR026C MTO1P53070 669 aa8.61□□□□□ -1.03
PEX12YMR026C YBL113CQ7M4S9 792 aa8.61□□□□□ -1.03
PEX12YMR026C ERP5P38819 212 aa8.6□□□□□ -1.03
PEX12YMR026C QDR2P40474 542 aa8.6□□□□□ -1.03
PEX12YMR026C ATG1P53104 897 aa8.6□□□□□ -1.03
PEX12YMR026C YDL176WQ12027 708 aa8.6□□□□□ -1.03
PEX12YMR026C APC11Q12157 165 aa8.6□□□□□ -1.03
PEX12YMR026C TRL1P09880 827 aaKnown RBP8.59□□□□□ -1.03
PEX12YMR026C GLO3P38682 493 aaKnown RBP8.59□□□□□ -1.03
PEX12YMR026C SSF1P38789 453 aaPredicted RBP8.59□□□□□ -1.03
PEX12YMR026C CCP1P00431 361 aa8.58□□□□□ -1.04
PEX12YMR026C MRPL16P38064 232 aa8.58□□□□□ -1.04
PEX12YMR026C QDR1P40475 563 aa8.58□□□□□ -1.04
PEX12YMR026C RGP1P16664 663 aa8.57□□□□□ -1.04
PEX12YMR026C LDH1P38139 375 aa8.57□□□□□ -1.04
PEX12YMR026C DYS1P38791 387 aa8.57□□□□□ -1.04
PEX12YMR026C CUZ1P53899 274 aa8.57□□□□□ -1.04
PEX12YMR026C DIT1P21623 536 aa8.56□□□□□ -1.04
PEX12YMR026C YMR265CQ03508 461 aaKnown RBP8.56□□□□□ -1.04
PEX12YMR026C YML020WQ03722 664 aa8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms