RNA–Protein interactions for RNA: YMR005W

TAF4, Transcript of TFIID subunit (48 kDa), yeastyeast

Gene TAF4, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAF4YMR005W DLD1P32891 587 aa9.15□□□□□ -0.94
TAF4YMR005W UTP7P40055 554 aaKnown RBP9.15□□□□□ -0.94
TAF4YMR005W VAN1P23642 535 aa9.14□□□□□ -0.95
TAF4YMR005W LSC2P53312 427 aa9.14□□□□□ -0.95
TAF4YMR005W UBP1P25037 809 aa9.13□□□□□ -0.95
TAF4YMR005W SUM1P46676 1062 aa9.13□□□□□ -0.95
TAF4YMR005W PUF6Q04373 656 aaKnown RBP9.13□□□□□ -0.95
TAF4YMR005W YJR098CP47139 656 aa9.11□□□□□ -0.95
TAF4YMR005W TRS33Q99394 268 aa9.11□□□□□ -0.95
TAF4YMR005W YLR346CQ06139 101 aa9.1□□□□□ -0.95
TAF4YMR005W YPQ2Q06328 317 aa9.09□□□□□ -0.95
TAF4YMR005W ALA1P40825 983 aaKnown RBP9.08□□□□□ -0.96
TAF4YMR005W MSN5P52918 1224 aa9.08□□□□□ -0.96
TAF4YMR005W MCM1P11746 286 aa9.07□□□□□ -0.96
TAF4YMR005W SSN3P39073 555 aa9.07□□□□□ -0.96
TAF4YMR005W CWH41P53008 833 aa9.07□□□□□ -0.96
TAF4YMR005W NGR1P32831 672 aaKnown RBP9.06□□□□□ -0.96
TAF4YMR005W VTC4P47075 721 aa9.06□□□□□ -0.96
TAF4YMR005W CWC15Q03772 175 aaKnown RBP9.06□□□□□ -0.96
TAF4YMR005W OPT2Q06593 877 aa9.06□□□□□ -0.96
TAF4YMR005W UBP2Q01476 1272 aa9.05□□□□□ -0.96
TAF4YMR005W PUN1Q06991 263 aa9.05□□□□□ -0.96
TAF4YMR005W TCB1Q12466 1186 aa9.05□□□□□ -0.96
TAF4YMR005W MET22P32179 357 aa9.04□□□□□ -0.96
TAF4YMR005W DAL1P32375 460 aa9.04□□□□□ -0.96
TAF4YMR005W SRS2P12954 1174 aa9.03□□□□□ -0.96
TAF4YMR005W CDC3P32457 520 aaKnown RBP9.03□□□□□ -0.96
TAF4YMR005W AHP1P38013 176 aaKnown RBP9.03□□□□□ -0.96
TAF4YMR005W LCB5Q06147 687 aaKnown RBP9.03□□□□□ -0.96
TAF4YMR005W SUV3P32580 737 aa9.02□□□□□ -0.97
TAF4YMR005W GLY1P37303 387 aaKnown RBP9.02□□□□□ -0.97
TAF4YMR005W JJJ2P46997 583 aa9.02□□□□□ -0.97
TAF4YMR005W YDR444WQ04093 687 aa9.02□□□□□ -0.97
TAF4YMR005W TPS3P38426 1054 aaKnown RBP9.01□□□□□ -0.97
TAF4YMR005W ALD4P46367 519 aaKnown RBP9.01□□□□□ -0.97
TAF4YMR005W SCW11P53189 542 aa9□□□□□ -0.97
TAF4YMR005W PNP1Q05788 311 aa9□□□□□ -0.97
TAF4YMR005W SLA1P32790 1244 aa8.98□□□□□ -0.97
TAF4YMR005W SCD5P34758 872 aa8.98□□□□□ -0.97
TAF4YMR005W TY1A-BLQ12266 440 aa8.97□□□□□ -0.97
TAF4YMR005W TY1A-DR3Q12441 440 aa8.97□□□□□ -0.97
TAF4YMR005W IRE1P32361 1115 aa8.96□□□□□ -0.98
TAF4YMR005W HXT5P38695 592 aa8.96□□□□□ -0.98
TAF4YMR005W CAB1Q04430 367 aa8.96□□□□□ -0.98
TAF4YMR005W SHM1P37292 490 aaPredicted RBP8.95□□□□□ -0.98
TAF4YMR005W OSH7P38755 437 aa8.95□□□□□ -0.98
TAF4YMR005W FOX2Q02207 900 aaKnown RBP8.95□□□□□ -0.98
TAF4YMR005W CDC19P00549 500 aaKnown RBP8.94□□□□□ -0.98
TAF4YMR005W UBP15P50101 1230 aa8.94□□□□□ -0.98
TAF4YMR005W YNL165WP53891 406 aa8.94□□□□□ -0.98
TAF4YMR005W Q0182Q9ZZW1 134 aa8.94□□□□□ -0.98
TAF4YMR005W MLF3P32047 452 aa8.93□□□□□ -0.98
TAF4YMR005W RRN6P32786 894 aa8.93□□□□□ -0.98
TAF4YMR005W YBR197CP38306 217 aa8.93□□□□□ -0.98
TAF4YMR005W YTA6P40328 754 aa8.93□□□□□ -0.98
TAF4YMR005W KAR5Q04746 504 aa8.93□□□□□ -0.98
TAF4YMR005W UTP4Q06679 776 aaKnown RBP8.93□□□□□ -0.98
TAF4YMR005W FUR4P05316 633 aaKnown RBP8.92□□□□□ -0.98
TAF4YMR005W RPS31P05759 152 aaKnown RBP8.92□□□□□ -0.98
TAF4YMR005W GAR1P28007 205 aaKnown RBP8.91□□□□□ -0.98
TAF4YMR005W ISC10P32645 267 aa8.91□□□□□ -0.98
TAF4YMR005W PDC6P26263 563 aaKnown RBP8.9□□□□□ -0.98
TAF4YMR005W RGA1P39083 1007 aa8.9□□□□□ -0.98
TAF4YMR005W BOL3P39724 118 aa8.9□□□□□ -0.98
TAF4YMR005W PSH1Q12161 406 aa8.9□□□□□ -0.98
TAF4YMR005W HAT1Q12341 374 aa8.9□□□□□ -0.98
TAF4YMR005W MRPL33P20084 86 aa8.88□□□□□ -0.99
TAF4YMR005W ACO2P39533 789 aa8.86□□□□□ -0.99
TAF4YMR005W ROG3P43602 733 aa8.86□□□□□ -0.99
TAF4YMR005W NAM8Q00539 523 aaKnown RBP8.86□□□□□ -0.99
TAF4YMR005W LSO1Q3E827 93 aa8.86□□□□□ -0.99
TAF4YMR005W LEU1P07264 779 aaKnown RBP8.85□□□□□ -0.99
TAF4YMR005W GBP2P25555 427 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
TAF4YMR005W TY1A-MR1Q04215 440 aa8.85□□□□□ -0.99
TAF4YMR005W CAF120P53836 1060 aa8.84□□□□□ -0.99
TAF4YMR005W VMA3P25515 160 aa8.83□□□□□ -1
TAF4YMR005W SSF1P38789 453 aaPredicted RBP8.83□□□□□ -1
TAF4YMR005W YIR007WP40566 764 aa8.83□□□□□ -1
TAF4YMR005W ALD2P47771 506 aa8.83□□□□□ -1
TAF4YMR005W MTO1P53070 669 aa8.83□□□□□ -1
TAF4YMR005W ATG1P53104 897 aa8.83□□□□□ -1
TAF4YMR005W YBL113CQ7M4S9 792 aa8.83□□□□□ -1
TAF4YMR005W KAP122P32767 1081 aa8.82□□□□□ -1
TAF4YMR005W BOI1P38041 980 aaKnown RBP8.82□□□□□ -1
TAF4YMR005W QDR2P40474 542 aa8.82□□□□□ -1
TAF4YMR005W GLO3P38682 493 aaKnown RBP8.81□□□□□ -1
TAF4YMR005W ERP5P38819 212 aa8.81□□□□□ -1
TAF4YMR005W LDH1P38139 375 aa8.8□□□□□ -1
TAF4YMR005W DYS1P38791 387 aa8.8□□□□□ -1
TAF4YMR005W QDR1P40475 563 aa8.8□□□□□ -1
TAF4YMR005W APC11Q12157 165 aa8.8□□□□□ -1
TAF4YMR005W RGP1P16664 663 aa8.79□□□□□ -1
TAF4YMR005W YML020WQ03722 664 aa8.79□□□□□ -1
TAF4YMR005W STB3Q12427 513 aa8.79□□□□□ -1
TAF4YMR005W TRL1P09880 827 aaKnown RBP8.78□□□□□ -1
TAF4YMR005W MRPL16P38064 232 aa8.78□□□□□ -1
TAF4YMR005W GRS1P38088 690 aaKnown RBP8.78□□□□□ -1
TAF4YMR005W YDL176WQ12027 708 aa8.78□□□□□ -1
TAF4YMR005W CCP1P00431 361 aa8.77□□□□□ -1.01
TAF4YMR005W DIT1P21623 536 aa8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms