RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W POL32P47110 350 aa7.35□□□□□ -1.23
VPS36YLR417W ISU1Q03020 165 aa7.35□□□□□ -1.23
VPS36YLR417W SWI5P08153 709 aa7.34□□□□□ -1.23
VPS36YLR417W APP1P53933 587 aa7.34□□□□□ -1.23
VPS36YLR417W NUT2Q06213 157 aa7.34□□□□□ -1.23
VPS36YLR417W UTR2P32623 467 aa7.33□□□□□ -1.24
VPS36YLR417W ALD2P47771 506 aa7.33□□□□□ -1.24
VPS36YLR417W ORC1P54784 914 aaPredicted RBP7.33□□□□□ -1.24
VPS36YLR417W WHI5Q12416 295 aa7.33□□□□□ -1.24
VPS36YLR417W FBP26P32604 452 aa7.32□□□□□ -1.24
VPS36YLR417W THI12P42883 340 aa7.32□□□□□ -1.24
VPS36YLR417W THI5P43534 340 aa7.32□□□□□ -1.24
VPS36YLR417W BDP1P46678 594 aa7.32□□□□□ -1.24
VPS36YLR417W THI11P47183 340 aa7.32□□□□□ -1.24
VPS36YLR417W PUS5Q06244 254 aa7.32□□□□□ -1.24
VPS36YLR417W THI13Q07748 340 aa7.32□□□□□ -1.24
VPS36YLR417W ATE1P16639 503 aa7.32□□□□□ -1.24
VPS36YLR417W TBS1P38114 1094 aa7.31□□□□□ -1.24
VPS36YLR417W RPP2BP02400 110 aaKnown RBP7.3□□□□□ -1.24
VPS36YLR417W MKS1P34072 584 aa7.3□□□□□ -1.24
VPS36YLR417W SPR3P41901 512 aa7.3□□□□□ -1.24
VPS36YLR417W FRT1Q99332 602 aa7.3□□□□□ -1.24
VPS36YLR417W DAT1P13483 248 aaKnown RBP7.3□□□□□ -1.24
VPS36YLR417W YBR197CP38306 217 aa7.3□□□□□ -1.24
VPS36YLR417W STE6P12866 1290 aa7.29□□□□□ -1.24
VPS36YLR417W MRT4P33201 236 aaKnown RBP7.29□□□□□ -1.24
VPS36YLR417W SDH2P21801 266 aa7.28□□□□□ -1.24
VPS36YLR417W MGE1P38523 228 aa7.28□□□□□ -1.24
VPS36YLR417W SVF1Q05515 481 aa7.28□□□□□ -1.24
VPS36YLR417W BOI1P38041 980 aaKnown RBP7.27□□□□□ -1.25
VPS36YLR417W FRK1Q03002 865 aaPredicted RBP7.27□□□□□ -1.25
VPS36YLR417W ISC10P32645 267 aa7.27□□□□□ -1.25
VPS36YLR417W TRS120Q04183 1289 aa7.27□□□□□ -1.25
VPS36YLR417W WTM2Q12206 467 aa7.27□□□□□ -1.25
VPS36YLR417W MET4P32389 672 aa7.26□□□□□ -1.25
VPS36YLR417W CST6P40535 587 aa7.26□□□□□ -1.25
VPS36YLR417W CAB1Q04430 367 aa7.26□□□□□ -1.25
VPS36YLR417W APC11Q12157 165 aa7.26□□□□□ -1.25
VPS36YLR417W SEC8P32855 1065 aa7.25□□□□□ -1.25
VPS36YLR417W YBL086CP38177 466 aa7.25□□□□□ -1.25
VPS36YLR417W MCM1P11746 286 aa7.24□□□□□ -1.25
VPS36YLR417W VRP1P37370 817 aa7.24□□□□□ -1.25
VPS36YLR417W SIS1P25294 352 aaKnown RBP7.24□□□□□ -1.25
VPS36YLR417W YJR107WP47145 328 aa7.24□□□□□ -1.25
VPS36YLR417W FOX2Q02207 900 aaKnown RBP7.24□□□□□ -1.25
VPS36YLR417W OYE2Q03558 400 aaKnown RBP7.24□□□□□ -1.25
VPS36YLR417W DFG5Q05031 458 aa7.24□□□□□ -1.25
VPS36YLR417W BDS1Q08347 646 aa7.24□□□□□ -1.25
VPS36YLR417W STB3Q12427 513 aa7.24□□□□□ -1.25
VPS36YLR417W UFD2P54860 961 aa7.23□□□□□ -1.25
VPS36YLR417W YPQ2Q06328 317 aa7.22□□□□□ -1.25
VPS36YLR417W HXT5P38695 592 aa7.21□□□□□ -1.25
VPS36YLR417W RTT106P40161 455 aa7.21□□□□□ -1.25
VPS36YLR417W GPI13Q07830 1017 aa7.21□□□□□ -1.26
VPS36YLR417W SCD5P34758 872 aa7.2□□□□□ -1.26
VPS36YLR417W SUM1P46676 1062 aa7.2□□□□□ -1.26
VPS36YLR417W HED1Q03937 162 aa7.2□□□□□ -1.26
VPS36YLR417W MRPL33P20084 86 aa7.19□□□□□ -1.26
VPS36YLR417W DLD3P39976 496 aaKnown RBP7.19□□□□□ -1.26
VPS36YLR417W MNL2Q12205 849 aa7.19□□□□□ -1.26
VPS36YLR417W PHO4P07270 312 aaKnown RBP7.18□□□□□ -1.26
VPS36YLR417W RPB10P22139 70 aa7.18□□□□□ -1.26
VPS36YLR417W NAP1P25293 417 aaKnown RBP7.18□□□□□ -1.26
VPS36YLR417W UTP7P40055 554 aaKnown RBP7.17□□□□□ -1.26
VPS36YLR417W MET1P36150 593 aa7.16□□□□□ -1.26
VPS36YLR417W SUT1P53032 299 aaKnown RBP7.16□□□□□ -1.26
VPS36YLR417W GCD6P32501 712 aaKnown RBP7.15□□□□□ -1.26
VPS36YLR417W YNL011CP53980 444 aa7.15□□□□□ -1.26
VPS36YLR417W UTP4Q06679 776 aaKnown RBP7.15□□□□□ -1.26
VPS36YLR417W SMC1P32908 1225 aa7.15□□□□□ -1.27
VPS36YLR417W KTR2P33550 425 aa7.15□□□□□ -1.27
VPS36YLR417W VMA3P25515 160 aa7.14□□□□□ -1.27
VPS36YLR417W RPT1P33299 467 aaKnown RBP7.14□□□□□ -1.27
VPS36YLR417W CDC55Q00362 526 aa7.14□□□□□ -1.27
VPS36YLR417W VPS35P34110 944 aa7.13□□□□□ -1.27
VPS36YLR417W HXT8P40886 569 aa7.13□□□□□ -1.27
VPS36YLR417W DAK2P43550 591 aa7.13□□□□□ -1.27
VPS36YLR417W AMS1P22855 1083 aa7.13□□□□□ -1.27
VPS36YLR417W BCK2P33306 851 aa7.13□□□□□ -1.27
VPS36YLR417W SAM37P50110 327 aa7.13□□□□□ -1.27
VPS36YLR417W RMD1Q03441 430 aa7.13□□□□□ -1.27
VPS36YLR417W JIP5Q06214 492 aaPredicted RBP7.13□□□□□ -1.27
VPS36YLR417W LDH1P38139 375 aa7.12□□□□□ -1.27
VPS36YLR417W OCA5P38738 679 aa7.12□□□□□ -1.27
VPS36YLR417W FYV10P40492 516 aa7.12□□□□□ -1.27
VPS36YLR417W RSC4Q02206 625 aa7.12□□□□□ -1.27
VPS36YLR417W Q0182Q9ZZW1 134 aa7.12□□□□□ -1.27
VPS36YLR417W ALA1P40825 983 aaKnown RBP7.11□□□□□ -1.27
VPS36YLR417W NNF1P47149 201 aa7.11□□□□□ -1.27
VPS36YLR417W YTA7P40340 1379 aa7.11□□□□□ -1.27
VPS36YLR417W MET32Q12041 191 aa7.1□□□□□ -1.27
VPS36YLR417W DYS1P38791 387 aa7.1□□□□□ -1.27
VPS36YLR417W XDJ1P39102 459 aa7.1□□□□□ -1.27
VPS36YLR417W MCM2P29469 868 aa7.09□□□□□ -1.27
VPS36YLR417W YNL165WP53891 406 aa7.09□□□□□ -1.27
VPS36YLR417W OXR1Q08952 273 aa7.09□□□□□ -1.27
VPS36YLR417W UGA3P26370 528 aa7.08□□□□□ -1.28
VPS36YLR417W CIC1P38779 376 aaKnown RBP7.08□□□□□ -1.28
VPS36YLR417W SSN3P39073 555 aa7.08□□□□□ -1.28
VPS36YLR417W MSN5P52918 1224 aa7.08□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 101.6 ms