RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C KRE33P53914 1056 aaKnown RBP8.26□□□□□ -1.09
AFG2YLR397C YDR338CQ05497 695 aa8.26□□□□□ -1.09
AFG2YLR397C SDH5Q08230 162 aa8.26□□□□□ -1.09
AFG2YLR397C CAT8P39113 1433 aa8.26□□□□□ -1.09
AFG2YLR397C PDR18P53756 1333 aa8.25□□□□□ -1.09
AFG2YLR397C BRN1P38170 754 aa8.25□□□□□ -1.09
AFG2YLR397C CWH41P53008 833 aa8.25□□□□□ -1.09
AFG2YLR397C MSH6Q03834 1242 aa8.25□□□□□ -1.09
AFG2YLR397C CLF1Q12309 687 aaPredicted RBP8.25□□□□□ -1.09
AFG2YLR397C NKP1Q12493 238 aa8.25□□□□□ -1.09
AFG2YLR397C LSO1Q3E827 93 aa8.25□□□□□ -1.09
AFG2YLR397C MET5P47169 1442 aa8.24□□□□□ -1.09
AFG2YLR397C RPL5P26321 297 aaKnown RBP8.24□□□□□ -1.09
AFG2YLR397C MRPL10P36520 322 aa8.24□□□□□ -1.09
AFG2YLR397C ERC1P38767 581 aa8.24□□□□□ -1.09
AFG2YLR397C SUM1P46676 1062 aa8.24□□□□□ -1.09
AFG2YLR397C YML119WQ03208 357 aa8.24□□□□□ -1.09
AFG2YLR397C VPS20Q04272 221 aa8.24□□□□□ -1.09
AFG2YLR397C HIR3P47171 1648 aa8.24□□□□□ -1.09
AFG2YLR397C SEC23P15303 768 aaKnown RBP8.24□□□□□ -1.09
AFG2YLR397C YEL1P34225 687 aa8.24□□□□□ -1.09
AFG2YLR397C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
AFG2YLR397C DNF1P32660 1571 aa8.23□□□□□ -1.09
AFG2YLR397C RRP1P35178 278 aaPredicted RBP8.23□□□□□ -1.09
AFG2YLR397C IOC2Q12072 812 aa8.23□□□□□ -1.09
AFG2YLR397C PSK1P31374 1356 aa8.23□□□□□ -1.09
AFG2YLR397C MRC1P25588 1096 aa8.23□□□□□ -1.09
AFG2YLR397C OSW7P43611 510 aa8.23□□□□□ -1.09
AFG2YLR397C CDC3P32457 520 aaKnown RBP8.22□□□□□ -1.09
AFG2YLR397C ILV3P39522 585 aaKnown RBP8.22□□□□□ -1.09
AFG2YLR397C CTK3P46963 296 aaPredicted RBP8.22□□□□□ -1.09
AFG2YLR397C PUF6Q04373 656 aaKnown RBP8.22□□□□□ -1.09
AFG2YLR397C ATG26Q06321 1198 aa8.22□□□□□ -1.09
AFG2YLR397C CMS1Q07897 291 aaKnown RBP8.22□□□□□ -1.09
AFG2YLR397C TFB4Q12004 338 aa8.22□□□□□ -1.09
AFG2YLR397C ESP1Q03018 1630 aa8.22□□□□□ -1.09
AFG2YLR397C SPE2P21182 396 aa8.21□□□□□ -1.09
AFG2YLR397C EXO84P38261 753 aa8.21□□□□□ -1.09
AFG2YLR397C HST2P53686 357 aa8.21□□□□□ -1.09
AFG2YLR397C SEC5P89102 971 aa8.21□□□□□ -1.09
AFG2YLR397C VPS15P22219 1454 aa8.21□□□□□ -1.1
AFG2YLR397C CDC37P06101 506 aaKnown RBP8.21□□□□□ -1.1
AFG2YLR397C KAR9P32526 644 aa8.21□□□□□ -1.1
AFG2YLR397C MVP1P40959 511 aaKnown RBP8.21□□□□□ -1.1
AFG2YLR397C ALD4P46367 519 aaKnown RBP8.21□□□□□ -1.1
AFG2YLR397C IST1P53843 298 aaPredicted RBP8.21□□□□□ -1.1
AFG2YLR397C BET4Q00618 327 aa8.21□□□□□ -1.1
AFG2YLR397C LCB5Q06147 687 aaKnown RBP8.21□□□□□ -1.1
AFG2YLR397C PDR15Q04182 1529 aaKnown RBP8.21□□□□□ -1.1
AFG2YLR397C BUD2P33314 1104 aa8.2□□□□□ -1.1
AFG2YLR397C YFR006WP43590 535 aa8.2□□□□□ -1.1
AFG2YLR397C TFC8Q12308 588 aa8.2□□□□□ -1.1
AFG2YLR397C HSC82P15108 705 aaKnown RBP8.2□□□□□ -1.1
AFG2YLR397C DAL7P21826 554 aa8.2□□□□□ -1.1
AFG2YLR397C NAB3P38996 802 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
AFG2YLR397C YIL092WP40497 633 aa8.2□□□□□ -1.1
AFG2YLR397C RPL17AP05740 184 aaKnown RBP8.19□□□□□ -1.1
AFG2YLR397C TRK1P12685 1235 aa8.19□□□□□ -1.1
AFG2YLR397C UBP13P38187 747 aa8.19□□□□□ -1.1
AFG2YLR397C BDH2P39713 417 aa8.19□□□□□ -1.1
AFG2YLR397C PKH1Q03407 766 aa8.19□□□□□ -1.1
AFG2YLR397C HRQ1Q05549 1077 aa8.19□□□□□ -1.1
AFG2YLR397C MRPS28P21771 286 aa8.19□□□□□ -1.1
AFG2YLR397C SFH1Q06168 426 aa8.19□□□□□ -1.1
AFG2YLR397C SEC20P28791 383 aa8.18□□□□□ -1.1
AFG2YLR397C CSE1P33307 960 aa8.18□□□□□ -1.1
AFG2YLR397C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
AFG2YLR397C SHE4P51534 789 aa8.18□□□□□ -1.1
AFG2YLR397C TIF3P34167 436 aaKnown RBP8.18□□□□□ -1.1
AFG2YLR397C YIR042CP40586 236 aa8.18□□□□□ -1.1
AFG2YLR397C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
AFG2YLR397C KRS1P15180 591 aaKnown RBP8.17□□□□□ -1.1
AFG2YLR397C DLD1P32891 587 aa8.17□□□□□ -1.1
AFG2YLR397C RSM25P40496 264 aa8.17□□□□□ -1.1
AFG2YLR397C SFB2P53953 876 aa8.17□□□□□ -1.1
AFG2YLR397C TSR2Q06672 205 aaKnown RBP8.17□□□□□ -1.1
AFG2YLR397C TRS33Q99394 268 aa8.17□□□□□ -1.1
AFG2YLR397C TY3B-GQ99315 1547 aa8.17□□□□□ -1.1
AFG2YLR397C VPS35P34110 944 aa8.17□□□□□ -1.1
AFG2YLR397C YLF2P38746 405 aa8.17□□□□□ -1.1
AFG2YLR397C HST1P53685 503 aa8.17□□□□□ -1.1
AFG2YLR397C ADE12P80210 433 aaKnown RBP8.17□□□□□ -1.1
AFG2YLR397C FAR1P21268 830 aa8.16□□□□□ -1.1
AFG2YLR397C CDC48P25694 835 aaKnown RBP8.16□□□□□ -1.1
AFG2YLR397C ECM4P36156 370 aa8.16□□□□□ -1.1
AFG2YLR397C CTH1P47976 325 aa8.16□□□□□ -1.1
AFG2YLR397C BNI4P53858 892 aa8.16□□□□□ -1.1
AFG2YLR397C RPO31P04051 1460 aa8.16□□□□□ -1.1
AFG2YLR397C ESC1Q03661 1658 aaKnown RBP8.16□□□□□ -1.1
AFG2YLR397C SEC6P32844 805 aa8.15□□□□□ -1.1
AFG2YLR397C TAF1P46677 1066 aa8.15□□□□□ -1.1
AFG2YLR397C PET112P33893 541 aa8.15□□□□□ -1.1
AFG2YLR397C MPE1P35728 441 aaKnown RBP8.15□□□□□ -1.1
AFG2YLR397C YDR341CQ05506 607 aaKnown RBP8.15□□□□□ -1.1
AFG2YLR397C YPR097WQ06839 1073 aa8.15□□□□□ -1.1
AFG2YLR397C SWI6P09959 803 aa8.14□□□□□ -1.11
AFG2YLR397C HCA4P20448 770 aaKnown RBP8.14□□□□□ -1.11
AFG2YLR397C ECM32P32644 1121 aaKnown RBP8.14□□□□□ -1.11
AFG2YLR397C IES2P40154 320 aa8.14□□□□□ -1.11
AFG2YLR397C DSL1P53847 754 aa8.14□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms