RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	TIM11	P81449	96 aa	Predicted RBP	4.74	□□□□□ -1.65
YSH1	YLR277C	UTP4	Q06679	776 aa	Known RBP	4.74	□□□□□ -1.65
YSH1	YLR277C	LSP1	Q12230	341 aa	Known RBP	4.74	□□□□□ -1.65
YSH1	YLR277C	SRP54	P20424	541 aa	Known RBP	4.73	□□□□□ -1.65
YSH1	YLR277C	SPT5	P27692	1063 aa	Known RBP	4.73	□□□□□ -1.65
YSH1	YLR277C	APL6	P46682	809 aa		4.73	□□□□□ -1.65
YSH1	YLR277C	NDL1	Q06568	189 aa		4.73	□□□□□ -1.65
YSH1	YLR277C	SGT2	Q12118	346 aa	Known RBP	4.73	□□□□□ -1.65
YSH1	YLR277C	RUD3	Q12234	484 aa	Known RBP	4.73	□□□□□ -1.65
YSH1	YLR277C	PEX5	P35056	612 aa		4.73	□□□□□ -1.65
YSH1	YLR277C	MEP1	P40260	492 aa		4.73	□□□□□ -1.65
YSH1	YLR277C	GYP7	P48365	746 aa		4.73	□□□□□ -1.65
YSH1	YLR277C	ELA1	P53861	379 aa	Predicted RBP	4.73	□□□□□ -1.65
YSH1	YLR277C	JJJ1	P53863	590 aa		4.73	□□□□□ -1.65
YSH1	YLR277C	REX2	P54964	269 aa	Known RBP	4.73	□□□□□ -1.65
YSH1	YLR277C	ARR1	Q06596	294 aa		4.73	□□□□□ -1.65
YSH1	YLR277C	TY4A-H	Q6Q5P6	413 aa		4.73	□□□□□ -1.65
YSH1	YLR277C	TOM20	P35180	183 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	BLI1	P35727	113 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	KIC1	P38692	1080 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	PTC2	P39966	464 aa	Known RBP	4.72	□□□□□ -1.65
YSH1	YLR277C	VPS27	P40343	622 aa	Known RBP	4.72	□□□□□ -1.65
YSH1	YLR277C	ITC1	P53125	1264 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	APC5	Q08683	685 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	ERP4	Q12450	207 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	KEX2	P13134	814 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	ECM1	P39715	212 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	NOC2	P39744	710 aa	Known RBP	4.72	□□□□□ -1.65
YSH1	YLR277C	HUL5	P53119	910 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	RIA1	P53893	1110 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	TMA64	Q04600	565 aa	Known RBP	4.72	□□□□□ -1.65
YSH1	YLR277C	COG8	Q04632	607 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	CDC73	Q06697	393 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	SSF2	Q12153	453 aa	Predicted RBP	4.72	□□□□□ -1.65
YSH1	YLR277C	MAM3	Q12296	706 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	APC2	Q12440	853 aa		4.72	□□□□□ -1.65
YSH1	YLR277C	CDC31	P06704	161 aa	Known RBP	4.71	□□□□□ -1.66
YSH1	YLR277C	RPP1B	P10622	106 aa	Known RBP	4.71	□□□□□ -1.66
YSH1	YLR277C	MSM1	P22438	575 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	BRF1	P29056	596 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	PSO2	P30620	661 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	MFT1	P33441	392 aa	Known RBP	4.71	□□□□□ -1.66
YSH1	YLR277C	KDX1	P36005	433 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	MAL31	P38156	614 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	BEM4	P39011	633 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	SNF7	P39929	240 aa	Known RBP	4.71	□□□□□ -1.66
YSH1	YLR277C	SMD2	Q06217	110 aa	Known RBP	4.71	□□□□□ -1.66
YSH1	YLR277C	GLC3	P32775	704 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	ARC19	P33204	171 aa	Known RBP	4.71	□□□□□ -1.66
YSH1	YLR277C	ESL2	P36168	1195 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	PPX1	P38698	397 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	YHR218W	P38899	603 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	XDJ1	P39102	459 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	MET10	P39692	1035 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	RAD17	P48581	401 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	HST2	P53686	357 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	YNL247W	P53852	767 aa	Known RBP	4.71	□□□□□ -1.66
YSH1	YLR277C	YAF9	P53930	226 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	ORM2	Q06144	216 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	TFB4	Q12004	338 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	PUS1	Q12211	544 aa	Known RBP	4.71	□□□□□ -1.66
YSH1	YLR277C	WHI5	Q12416	295 aa		4.71	□□□□□ -1.66
YSH1	YLR277C	SIT1	P39980	628 aa		4.7	□□□□□ -1.66
YSH1	YLR277C	TPM2	P40414	161 aa		4.7	□□□□□ -1.66
YSH1	YLR277C	CCM1	P48237	864 aa	Predicted RBP	4.7	□□□□□ -1.66
YSH1	YLR277C	YML119W	Q03208	357 aa		4.7	□□□□□ -1.66
YSH1	YLR277C	MSH6	Q03834	1242 aa		4.7	□□□□□ -1.66
YSH1	YLR277C	ISU2	Q12056	156 aa		4.7	□□□□□ -1.66
YSH1	YLR277C	MAK21	Q12176	1025 aa	Known RBP	4.7	□□□□□ -1.66
YSH1	YLR277C	DBP10	Q12389	995 aa	Known RBP	4.7	□□□□□ -1.66
YSH1	YLR277C	SAC3	P46674	1301 aa		4.7	□□□□□ -1.66
YSH1	YLR277C	YEF3	P16521	1044 aa	Known RBP	4.69	□□□□□ -1.66
YSH1	YLR277C	GAP1	P19145	602 aa	Predicted RBP	4.69	□□□□□ -1.66
YSH1	YLR277C	UGA3	P26370	528 aa		4.69	□□□□□ -1.66
YSH1	YLR277C	RKM3	P38222	552 aa		4.69	□□□□□ -1.66
YSH1	YLR277C	EFM2	P38347	419 aa		4.69	□□□□□ -1.66
YSH1	YLR277C	GPI8	P49018	411 aa		4.69	□□□□□ -1.66
YSH1	YLR277C	ATG26	Q06321	1198 aa		4.69	□□□□□ -1.66
YSH1	YLR277C	MDM38	Q08179	573 aa		4.69	□□□□□ -1.66
YSH1	YLR277C	SLP1	Q12232	587 aa		4.69	□□□□□ -1.66
YSH1	YLR277C	PPH3	P32345	308 aa		4.69	□□□□□ -1.66
YSH1	YLR277C	ZUO1	P32527	433 aa	Known RBP	4.69	□□□□□ -1.66
YSH1	YLR277C	ORC6	P38826	435 aa		4.69	□□□□□ -1.66
YSH1	YLR277C	RSC1	P53236	928 aa		4.69	□□□□□ -1.66
YSH1	YLR277C	STH1	P32597	1359 aa		4.69	□□□□□ -1.66
YSH1	YLR277C	MAK16	P10962	306 aa	Predicted RBP	4.68	□□□□□ -1.66
YSH1	YLR277C	KAR3	P17119	729 aa		4.68	□□□□□ -1.66
YSH1	YLR277C	ACP1	P32463	125 aa		4.68	□□□□□ -1.66
YSH1	YLR277C	YGL081W	P53156	320 aa		4.68	□□□□□ -1.66
YSH1	YLR277C	ESF2	P53743	316 aa	Known RBP	4.68	□□□□□ -1.66
YSH1	YLR277C	DSL1	P53847	754 aa		4.68	□□□□□ -1.66
YSH1	YLR277C	SVL3	Q03088	825 aa	Known RBP	4.68	□□□□□ -1.66
YSH1	YLR277C	COG4	Q06096	861 aa		4.68	□□□□□ -1.66
YSH1	YLR277C	LSO1	Q3E827	93 aa		4.68	□□□□□ -1.66
YSH1	YLR277C	BRR1	Q99177	341 aa	Predicted RBP	4.68	□□□□□ -1.66
YSH1	YLR277C	NOP14	Q99207	810 aa	Known RBP	4.68	□□□□□ -1.66
YSH1	YLR277C	SWI3	P32591	825 aa		4.68	□□□□□ -1.66
YSH1	YLR277C	MAM1	P40065	302 aa		4.68	□□□□□ -1.66
YSH1	YLR277C	IES1	P43579	692 aa		4.68	□□□□□ -1.66
YSH1	YLR277C	YPP1	P46951	817 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms