RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C SER1P33330 395 aaKnown RBP13.2□□□□□ -0.3
SPT8YLR055C YOL057WQ08225 711 aa13.2□□□□□ -0.3
SPT8YLR055C NKP2Q06162 153 aa13.18□□□□□ -0.3
SPT8YLR055C RAD50P12753 1312 aa13.18□□□□□ -0.3
SPT8YLR055C YGL082WP53155 381 aa13.18□□□□□ -0.3
SPT8YLR055C VPS64Q03944 604 aa13.18□□□□□ -0.3
SPT8YLR055C HPC2Q01448 625 aa13.17□□□□□ -0.3
SPT8YLR055C DLD1P32891 587 aa13.16□□□□□ -0.3
SPT8YLR055C APL2P36000 726 aaPredicted RBP13.16□□□□□ -0.3
SPT8YLR055C TOS1P38288 455 aa13.16□□□□□ -0.3
SPT8YLR055C LEO1P38439 464 aa13.15□□□□□ -0.3
SPT8YLR055C CTR9P89105 1077 aa13.15□□□□□ -0.3
SPT8YLR055C ARG8P18544 423 aa13.14□□□□□ -0.31
SPT8YLR055C YNG2P38806 282 aaKnown RBP13.14□□□□□ -0.31
SPT8YLR055C RFC1P38630 861 aaKnown RBP13.13□□□□□ -0.31
SPT8YLR055C SPO1P53541 631 aa13.13□□□□□ -0.31
SPT8YLR055C RIX7Q07844 837 aaKnown RBP13.13□□□□□ -0.31
SPT8YLR055C CTI6Q08923 506 aa13.13□□□□□ -0.31
SPT8YLR055C DNM1P54861 757 aa13.13□□□□□ -0.31
SPT8YLR055C COG8Q04632 607 aa13.13□□□□□ -0.31
SPT8YLR055C YPR204WQ08995 1032 aa13.13□□□□□ -0.31
SPT8YLR055C GCR2Q01722 534 aa13.12□□□□□ -0.31
SPT8YLR055C HAP5Q02516 242 aa13.12□□□□□ -0.31
SPT8YLR055C CSI1Q04368 295 aa13.12□□□□□ -0.31
SPT8YLR055C DCD1P06773 312 aa13.11□□□□□ -0.31
SPT8YLR055C LPD1P09624 499 aaKnown RBP13.11□□□□□ -0.31
SPT8YLR055C MRP7P12687 371 aa13.1□□□□□ -0.31
SPT8YLR055C BRN1P38170 754 aa13.1□□□□□ -0.31
SPT8YLR055C NMD2P38798 1089 aaKnown RBP13.1□□□□□ -0.31
SPT8YLR055C YPP1P46951 817 aa13.1□□□□□ -0.31
SPT8YLR055C YDR306CQ06640 478 aa13.1□□□□□ -0.31
SPT8YLR055C CST6P40535 587 aa13.09□□□□□ -0.31
SPT8YLR055C NUP133P36161 1157 aa13.08□□□□□ -0.32
SPT8YLR055C SWI1P09547 1314 aa13.08□□□□□ -0.32
SPT8YLR055C YGR122WP53272 402 aa13.07□□□□□ -0.32
SPT8YLR055C LCD1Q04377 747 aa13.07□□□□□ -0.32
SPT8YLR055C NOP8Q08287 484 aaPredicted RBP13.07□□□□□ -0.32
SPT8YLR055C RAT1Q02792 1006 aaKnown RBP13.06□□□□□ -0.32
SPT8YLR055C PKH1Q03407 766 aa13.06□□□□□ -0.32
SPT8YLR055C RPS19AP07280 144 aaKnown RBP13.06□□□□□ -0.32
SPT8YLR055C RPS19BP07281 144 aaPredicted RBP13.06□□□□□ -0.32
SPT8YLR055C RSC1P53236 928 aa13.05□□□□□ -0.32
SPT8YLR055C YLR271WQ06152 274 aa13.05□□□□□ -0.32
SPT8YLR055C HXT13P39924 564 aa13.04□□□□□ -0.32
SPT8YLR055C NPA3P47122 385 aa13.04□□□□□ -0.32
SPT8YLR055C MSN5P52918 1224 aa13.04□□□□□ -0.32
SPT8YLR055C RAD24P32641 659 aa13.03□□□□□ -0.32
SPT8YLR055C EAF6P47128 113 aa13.03□□□□□ -0.32
SPT8YLR055C PIL1P53252 339 aaKnown RBP13.03□□□□□ -0.32
SPT8YLR055C BDH2P39713 417 aa13.02□□□□□ -0.32
SPT8YLR055C YJR008WP47085 338 aa13.02□□□□□ -0.32
SPT8YLR055C SWC3P31376 625 aa13.02□□□□□ -0.33
SPT8YLR055C YGL081WP53156 320 aa13.02□□□□□ -0.33
SPT8YLR055C VPS20Q04272 221 aa13.02□□□□□ -0.33
SPT8YLR055C RKM3P38222 552 aa13.01□□□□□ -0.33
SPT8YLR055C HXT17P53631 564 aa13.01□□□□□ -0.33
SPT8YLR055C FCP1Q03254 732 aa13.01□□□□□ -0.33
SPT8YLR055C HAT1Q12341 374 aa13.01□□□□□ -0.33
SPT8YLR055C CIR1P42940 261 aa13□□□□□ -0.33
SPT8YLR055C BDF2Q07442 638 aa13□□□□□ -0.33
SPT8YLR055C NOP58Q12499 511 aaKnown RBP13□□□□□ -0.33
SPT8YLR055C HST1P53685 503 aa12.99□□□□□ -0.33
SPT8YLR055C DIB1Q06819 143 aaPredicted RBP12.99□□□□□ -0.33
SPT8YLR055C RNR2P09938 399 aaKnown RBP12.99□□□□□ -0.33
SPT8YLR055C CDC16P09798 840 aa12.98□□□□□ -0.33
SPT8YLR055C SSK22P25390 1331 aaPredicted RBP12.97□□□□□ -0.33
SPT8YLR055C RVS167P39743 482 aaKnown RBP12.97□□□□□ -0.33
SPT8YLR055C DUR1,2P32528 1835 aaKnown RBP12.97□□□□□ -0.33
SPT8YLR055C PMD1P32634 1753 aa12.97□□□□□ -0.33
SPT8YLR055C VAS1P07806 1104 aaKnown RBP12.97□□□□□ -0.33
SPT8YLR055C RPN12P32496 274 aa12.97□□□□□ -0.33
SPT8YLR055C PFF1P38244 976 aa12.97□□□□□ -0.33
SPT8YLR055C IRC3Q06683 689 aa12.97□□□□□ -0.33
SPT8YLR055C YKL222CP35995 705 aa12.96□□□□□ -0.33
SPT8YLR055C SET1P38827 1080 aaKnown RBP12.96□□□□□ -0.33
SPT8YLR055C BOI2P39969 1040 aa12.96□□□□□ -0.33
SPT8YLR055C CWH41P53008 833 aa12.96□□□□□ -0.33
SPT8YLR055C HRQ1Q05549 1077 aa12.96□□□□□ -0.33
SPT8YLR055C ERT1P38140 529 aa12.95□□□□□ -0.34
SPT8YLR055C CTT1P06115 562 aa12.95□□□□□ -0.34
SPT8YLR055C BIK1P11709 440 aa12.95□□□□□ -0.34
SPT8YLR055C TRL1P09880 827 aaKnown RBP12.94□□□□□ -0.34
SPT8YLR055C GCD7P32502 381 aaPredicted RBP12.94□□□□□ -0.34
SPT8YLR055C UBP12P39538 1254 aa12.94□□□□□ -0.34
SPT8YLR055C PSH1Q12161 406 aa12.94□□□□□ -0.34
SPT8YLR055C CAF20P12962 161 aaKnown RBP12.93□□□□□ -0.34
SPT8YLR055C MCM2P29469 868 aa12.93□□□□□ -0.34
SPT8YLR055C SMY1P32364 656 aaKnown RBP12.93□□□□□ -0.34
SPT8YLR055C RSM25P40496 264 aa12.93□□□□□ -0.34
SPT8YLR055C KEX1P09620 729 aa12.92□□□□□ -0.34
SPT8YLR055C BDP1P46678 594 aa12.92□□□□□ -0.34
SPT8YLR055C MIC60P36112 540 aa12.91□□□□□ -0.34
SPT8YLR055C YER156CP40093 338 aaKnown RBP12.91□□□□□ -0.34
SPT8YLR055C KRE33P53914 1056 aaKnown RBP12.91□□□□□ -0.34
SPT8YLR055C SYF1Q04048 859 aaPredicted RBP12.91□□□□□ -0.34
SPT8YLR055C HYR1P40581 163 aaKnown RBP12.9□□□□□ -0.34
SPT8YLR055C KIN4Q01919 800 aa12.9□□□□□ -0.34
SPT8YLR055C ERO1Q03103 563 aa12.9□□□□□ -0.34
SPT8YLR055C ESC2Q06340 456 aa12.9□□□□□ -0.34
SPT8YLR055C AIM44Q99299 758 aa12.9□□□□□ -0.34
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms