RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W HPC2Q01448 625 aa9.2□□□□□ -0.94
SNF7YLR025W RAD2P07276 1031 aa9.19□□□□□ -0.94
SNF7YLR025W SUI2P20459 304 aaKnown RBP9.19□□□□□ -0.94
SNF7YLR025W CHL1P22516 861 aaPredicted RBP9.19□□□□□ -0.94
SNF7YLR025W GRX4P32642 244 aa9.19□□□□□ -0.94
SNF7YLR025W YMR196WQ04336 1088 aa9.19□□□□□ -0.94
SNF7YLR025W TAP42Q04372 366 aa9.19□□□□□ -0.94
SNF7YLR025W RPC31P17890 251 aa9.18□□□□□ -0.94
SNF7YLR025W CSE4P36012 229 aa9.18□□□□□ -0.94
SNF7YLR025W YNR029CP53729 429 aaKnown RBP9.18□□□□□ -0.94
SNF7YLR025W DNF3Q12674 1656 aa9.18□□□□□ -0.94
SNF7YLR025W PDR1P12383 1068 aa9.17□□□□□ -0.94
SNF7YLR025W CPS1P27614 576 aa9.17□□□□□ -0.94
SNF7YLR025W HST2P53686 357 aa9.17□□□□□ -0.94
SNF7YLR025W TPD3P31383 635 aa9.16□□□□□ -0.94
SNF7YLR025W GLN1P32288 370 aaKnown RBP9.16□□□□□ -0.94
SNF7YLR025W NUD1P32336 851 aa9.16□□□□□ -0.94
SNF7YLR025W PTC2P39966 464 aaKnown RBP9.16□□□□□ -0.94
SNF7YLR025W SAP155P43612 1002 aa9.16□□□□□ -0.94
SNF7YLR025W SNF2P22082 1703 aa9.16□□□□□ -0.94
SNF7YLR025W NPL4P33755 580 aa9.15□□□□□ -0.94
SNF7YLR025W HIM1Q06674 414 aa9.15□□□□□ -0.94
SNF7YLR025W BUD27P43573 796 aaKnown RBP RIP-Chip data9.14□□□□□ -0.95not detected
SNF7YLR025W GAS4Q08271 471 aa9.14□□□□□ -0.95
SNF7YLR025W MMP1Q12372 583 aa9.14□□□□□ -0.95
SNF7YLR025W NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.13□□□□□ -0.95not detected
SNF7YLR025W YML082WQ04533 649 aaKnown RBP9.13□□□□□ -0.95
SNF7YLR025W TYW1Q08960 810 aaKnown RBP9.13□□□□□ -0.95
SNF7YLR025W DPS1P04802 557 aaKnown RBP9.12□□□□□ -0.95
SNF7YLR025W RPS24AP0CX31 135 aaKnown RBP9.12□□□□□ -0.95
SNF7YLR025W RPS24BP0CX32 135 aaKnown RBP9.12□□□□□ -0.95
SNF7YLR025W PRD1P25375 712 aa9.12□□□□□ -0.95
SNF7YLR025W KTR1P27810 393 aaKnown RBP9.12□□□□□ -0.95
SNF7YLR025W YNL115CP53925 644 aa9.12□□□□□ -0.95
SNF7YLR025W RAM1P22007 431 aa9.11□□□□□ -0.95
SNF7YLR025W RRP46P53256 223 aaPredicted RBP9.11□□□□□ -0.95
SNF7YLR025W DAL5P15365 543 aa9.1□□□□□ -0.95
SNF7YLR025W BRL1P38770 471 aa9.1□□□□□ -0.95
SNF7YLR025W SCJ1P25303 377 aa9.09□□□□□ -0.95
SNF7YLR025W ISM1P48526 1002 aa9.09□□□□□ -0.95
SNF7YLR025W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.08□□□□□ -0.96not detected
SNF7YLR025W STR2P47164 639 aa9.08□□□□□ -0.96
SNF7YLR025W TFB3Q03290 321 aa9.08□□□□□ -0.96
SNF7YLR025W THI22Q06490 572 aa9.08□□□□□ -0.96
SNF7YLR025W KEX2P13134 814 aa9.07□□□□□ -0.96
SNF7YLR025W SLY41P22215 453 aa9.06□□□□□ -0.96
SNF7YLR025W ESS1P22696 170 aa9.06□□□□□ -0.96
SNF7YLR025W BUD20Q08004 166 aaPredicted RBP9.06□□□□□ -0.96
SNF7YLR025W RPO41P13433 1351 aaKnown RBP9.06□□□□□ -0.96
SNF7YLR025W USO1P25386 1790 aa9.06□□□□□ -0.96
SNF7YLR025W GCD11P32481 527 aaKnown RBP9.05□□□□□ -0.96
SNF7YLR025W YFR016CP43597 1233 aaKnown RBP9.04□□□□□ -0.96
SNF7YLR025W EAF7P53911 425 aaKnown RBP9.04□□□□□ -0.96
SNF7YLR025W RTT109Q07794 436 aa9.04□□□□□ -0.96
SNF7YLR025W TY1B-NL2Q99337 1749 aaKnown RBP9.04□□□□□ -0.96
SNF7YLR025W AUS1Q08409 1394 aa9.03□□□□□ -0.96
SNF7YLR025W AKL1P38080 1108 aaKnown RBP9.03□□□□□ -0.96
SNF7YLR025W YIL092WP40497 633 aa9.03□□□□□ -0.96
SNF7YLR025W ZDS1P50111 915 aaKnown RBP9.03□□□□□ -0.96
SNF7YLR025W PRP43P53131 767 aaKnown RBP9.03□□□□□ -0.96
SNF7YLR025W PKH3Q03306 898 aaPredicted RBP9.03□□□□□ -0.96
SNF7YLR025W ERF2Q06551 359 aa9.03□□□□□ -0.96
SNF7YLR025W YPR015CQ12531 247 aa9.03□□□□□ -0.96
SNF7YLR025W PUF6Q04373 656 aaKnown RBP9.02□□□□□ -0.97
SNF7YLR025W PRT1P06103 763 aaKnown RBP9.01□□□□□ -0.97
SNF7YLR025W YJU3P28321 313 aa9.01□□□□□ -0.97
SNF7YLR025W HEF3P53978 1044 aaKnown RBP9.01□□□□□ -0.97
SNF7YLR025W SEC2P17065 759 aa9□□□□□ -0.97
SNF7YLR025W RRT14P40470 206 aa9□□□□□ -0.97
SNF7YLR025W POL32P47110 350 aa9□□□□□ -0.97
SNF7YLR025W GYP7P48365 746 aa9□□□□□ -0.97
SNF7YLR025W SIR4P11978 1358 aa8.99□□□□□ -0.97
SNF7YLR025W ADE6P38972 1358 aaKnown RBP8.99□□□□□ -0.97
SNF7YLR025W TY1A-DR4O74302 440 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-HP0C2I4 478 aaKnown RBP8.99□□□□□ -0.97
SNF7YLR025W TY1A-AP0CX57 440 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-PR1P0CX58 440 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-ORP0CX59 440 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-PR2P0CX60 440 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-DR5P0CX65 440 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-ER2P0CX66 440 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-GR3P0CX67 440 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-LR1P0CX68 440 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-MR2P0CX69 440 aa8.99□□□□□ -0.97
SNF7YLR025W MAM1P40065 302 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-JR2P47099 440 aa8.99□□□□□ -0.97
SNF7YLR025W PUS6P53294 404 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-DR1Q03856 440 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-ML1Q04706 440 aaKnown RBP8.99□□□□□ -0.97
SNF7YLR025W LAM6Q08001 693 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-BRQ12217 440 aa8.99□□□□□ -0.97
SNF7YLR025W RAD59Q12223 238 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-NL2Q12470 440 aa8.99□□□□□ -0.97
SNF7YLR025W TY1A-GR2Q12485 440 aa8.99□□□□□ -0.97
SNF7YLR025W ARG8P18544 423 aa8.98□□□□□ -0.97
SNF7YLR025W PKC1P24583 1151 aa8.98□□□□□ -0.97
SNF7YLR025W THI12P42883 340 aa8.98□□□□□ -0.97
SNF7YLR025W THI5P43534 340 aa8.98□□□□□ -0.97
SNF7YLR025W THI11P47183 340 aa8.98□□□□□ -0.97
SNF7YLR025W DSD1P53095 428 aa8.98□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms