RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C CHZ1P40019 153 aaPredicted RBP7.86□□□□□ -1.15
HEL1YKR017C SDS3P40505 327 aa7.86□□□□□ -1.15
HEL1YKR017C SVL3Q03088 825 aaKnown RBP7.86□□□□□ -1.15
HEL1YKR017C YDR338CQ05497 695 aa7.86□□□□□ -1.15
HEL1YKR017C APN1P22936 367 aa7.86□□□□□ -1.15
HEL1YKR017C PHO84P25297 587 aaKnown RBP7.86□□□□□ -1.15
HEL1YKR017C ATG19P35193 415 aa7.86□□□□□ -1.15
HEL1YKR017C YLF2P38746 405 aa7.86□□□□□ -1.15
HEL1YKR017C PMT7Q06644 662 aa7.86□□□□□ -1.15
HEL1YKR017C SIT4P20604 311 aa7.85□□□□□ -1.15
HEL1YKR017C ANP1P32629 500 aa7.85□□□□□ -1.15
HEL1YKR017C YNL050CP53952 270 aa7.85□□□□□ -1.15
HEL1YKR017C PNG1Q02890 363 aa7.85□□□□□ -1.15
HEL1YKR017C BUD14P27637 709 aa7.84□□□□□ -1.15
HEL1YKR017C HEM3P28789 327 aa7.84□□□□□ -1.15
HEL1YKR017C HIR2P32480 875 aa7.84□□□□□ -1.15
HEL1YKR017C STM1P39015 273 aaKnown RBP7.84□□□□□ -1.15
HEL1YKR017C MEF2P39677 819 aa7.84□□□□□ -1.15
HEL1YKR017C SWD1P39706 426 aa7.84□□□□□ -1.15
HEL1YKR017C ECM1P39715 212 aa7.84□□□□□ -1.15
HEL1YKR017C MAM1P40065 302 aa7.84□□□□□ -1.15
HEL1YKR017C TIM54P47045 478 aa7.84□□□□□ -1.15
HEL1YKR017C NNF1P47149 201 aa7.84□□□□□ -1.15
HEL1YKR017C RAD17P48581 401 aa7.84□□□□□ -1.15
HEL1YKR017C PEX21P50091 288 aa7.84□□□□□ -1.15
HEL1YKR017C TAP42Q04372 366 aa7.84□□□□□ -1.15
HEL1YKR017C TFB4Q12004 338 aa7.84□□□□□ -1.15
HEL1YKR017C SMY1P32364 656 aaKnown RBP7.83□□□□□ -1.16
HEL1YKR017C PEP12P32854 288 aa7.83□□□□□ -1.16
HEL1YKR017C ARB1P40024 610 aaKnown RBP7.83□□□□□ -1.16
HEL1YKR017C RTT106P40161 455 aa7.83□□□□□ -1.16
HEL1YKR017C VMA1P17255 1071 aaKnown RBP7.83□□□□□ -1.16
HEL1YKR017C FAR1P21268 830 aa7.83□□□□□ -1.16
HEL1YKR017C TIF3P34167 436 aaKnown RBP7.83□□□□□ -1.16
HEL1YKR017C RKM3P38222 552 aa7.83□□□□□ -1.16
HEL1YKR017C IAH1P41734 238 aa7.83□□□□□ -1.16
HEL1YKR017C SXM1Q04175 944 aaKnown RBP7.83□□□□□ -1.16
HEL1YKR017C ARV1Q06541 321 aa7.83□□□□□ -1.16
HEL1YKR017C STH1P32597 1359 aa7.82□□□□□ -1.16
HEL1YKR017C MER1P16523 270 aa7.82□□□□□ -1.16
HEL1YKR017C RPB4P20433 221 aaPredicted RBP7.82□□□□□ -1.16
HEL1YKR017C SSD1P24276 1250 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
HEL1YKR017C PKC1P24583 1151 aa7.82□□□□□ -1.16
HEL1YKR017C UTP18P40362 594 aaPredicted RBP7.82□□□□□ -1.16
HEL1YKR017C OYE2Q03558 400 aaKnown RBP7.82□□□□□ -1.16
HEL1YKR017C IRC3Q06683 689 aa7.82□□□□□ -1.16
HEL1YKR017C MPC54Q08550 464 aa7.82□□□□□ -1.16
HEL1YKR017C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
HEL1YKR017C PUF4P25339 888 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
HEL1YKR017C ACP1P32463 125 aa7.81□□□□□ -1.16
HEL1YKR017C MRE11P32829 692 aa7.81□□□□□ -1.16
HEL1YKR017C DLD1P32891 587 aa7.81□□□□□ -1.16
HEL1YKR017C SNZ1Q03148 297 aa7.81□□□□□ -1.16
HEL1YKR017C SLX4Q12098 748 aa7.81□□□□□ -1.16
HEL1YKR017C PET123P17558 318 aa7.8□□□□□ -1.16
HEL1YKR017C MRPL25P23369 157 aa7.8□□□□□ -1.16
HEL1YKR017C FUI1P38196 639 aa7.8□□□□□ -1.16
HEL1YKR017C OTU2P38747 307 aaKnown RBP7.8□□□□□ -1.16
HEL1YKR017C MSH6Q03834 1242 aa7.8□□□□□ -1.16
HEL1YKR017C MTC5Q03897 1148 aa7.8□□□□□ -1.16
HEL1YKR017C SSK22P25390 1331 aaPredicted RBP7.8□□□□□ -1.16
HEL1YKR017C NAT1P12945 854 aaKnown RBP7.79□□□□□ -1.16
HEL1YKR017C VPS24P36095 224 aaKnown RBP7.79□□□□□ -1.16
HEL1YKR017C VPS41P38959 992 aa7.79□□□□□ -1.16
HEL1YKR017C RRP8P38961 392 aaKnown RBP7.79□□□□□ -1.16
HEL1YKR017C YER034WP40022 185 aaKnown RBP7.79□□□□□ -1.16
HEL1YKR017C IRR1P40541 1150 aa7.79□□□□□ -1.16
HEL1YKR017C SHE4P51534 789 aa7.79□□□□□ -1.16
HEL1YKR017C HOP2P53187 214 aa7.79□□□□□ -1.16
HEL1YKR017C YRM1Q12340 786 aa7.79□□□□□ -1.16
HEL1YKR017C TRX2P22803 104 aaKnown RBP7.79□□□□□ -1.16
HEL1YKR017C UBP13P38187 747 aa7.79□□□□□ -1.16
HEL1YKR017C PET100P38958 111 aa7.79□□□□□ -1.16
HEL1YKR017C APL6P46682 809 aa7.79□□□□□ -1.16
HEL1YKR017C ENP2P48234 707 aaKnown RBP7.79□□□□□ -1.16
HEL1YKR017C FAP1P53971 965 aa7.79□□□□□ -1.16
HEL1YKR017C RNH1Q04740 348 aa7.79□□□□□ -1.16
HEL1YKR017C GRC3Q07845 632 aa7.79□□□□□ -1.16
HEL1YKR017C WHI5Q12416 295 aa7.79□□□□□ -1.16
HEL1YKR017C THS1P04801 734 aaKnown RBP7.78□□□□□ -1.16
HEL1YKR017C RAD3P06839 778 aa7.78□□□□□ -1.16
HEL1YKR017C ATG14P38270 344 aa7.78□□□□□ -1.16
HEL1YKR017C MXR1P40029 184 aa7.78□□□□□ -1.16
HEL1YKR017C RTT105P40063 208 aa7.78□□□□□ -1.16
HEL1YKR017C SEC26P41810 973 aaKnown RBP7.78□□□□□ -1.16
HEL1YKR017C SPO19Q03029 223 aa7.78□□□□□ -1.16
HEL1YKR017C RSM28Q03430 361 aa7.78□□□□□ -1.16
HEL1YKR017C ISA1Q07821 250 aaPredicted RBP7.78□□□□□ -1.16
HEL1YKR017C HNM1P19807 563 aa7.77□□□□□ -1.17
HEL1YKR017C TTI1P36097 1038 aa7.77□□□□□ -1.17
HEL1YKR017C RPG1P38249 964 aaKnown RBP7.77□□□□□ -1.17
HEL1YKR017C RXT2P38255 430 aa7.77□□□□□ -1.17
HEL1YKR017C SIT1P39980 628 aa7.77□□□□□ -1.17
HEL1YKR017C RTF1P53064 558 aa7.77□□□□□ -1.17
HEL1YKR017C VPS20Q04272 221 aa7.77□□□□□ -1.17
HEL1YKR017C ERB1Q04660 807 aaKnown RBP7.77□□□□□ -1.17
HEL1YKR017C DBP9Q06218 594 aaKnown RBP7.77□□□□□ -1.17
HEL1YKR017C ARR2Q06597 130 aa7.77□□□□□ -1.17
HEL1YKR017C SLP1Q12232 587 aa7.77□□□□□ -1.17
HEL1YKR017C DPB3P27344 201 aa7.76□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms