RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	UBP12	P39538	1254 aa		4.87	□□□□□ -1.63
LOS1	YKL205W	NUG1	P40010	520 aa	Known RBP	4.87	□□□□□ -1.63
LOS1	YKL205W	RPN11	P43588	306 aa	Known RBP	4.87	□□□□□ -1.63
LOS1	YKL205W	RAD2	P07276	1031 aa		4.86	□□□□□ -1.63
LOS1	YKL205W	SSA2	P10592	639 aa	Known RBP	4.86	□□□□□ -1.63
LOS1	YKL205W	SYF1	Q04048	859 aa	Predicted RBP	4.86	□□□□□ -1.63
LOS1	YKL205W	FKS1	P38631	1876 aa	Known RBP	4.86	□□□□□ -1.63
LOS1	YKL205W	OSH3	P38713	996 aa	Known RBP	4.86	□□□□□ -1.63
LOS1	YKL205W	ORC1	P54784	914 aa	Predicted RBP	4.86	□□□□□ -1.63
LOS1	YKL205W	PSF3	Q12146	194 aa		4.86	□□□□□ -1.63
LOS1	YKL205W	PRI1	P10363	409 aa		4.85	□□□□□ -1.63
LOS1	YKL205W	RRT14	P40470	206 aa		4.85	□□□□□ -1.63
LOS1	YKL205W	POL32	P47110	350 aa		4.85	□□□□□ -1.63
LOS1	YKL205W	PAP2	P53632	584 aa	Known RBP	4.85	□□□□□ -1.63
LOS1	YKL205W	ECM23	Q02710	187 aa		4.85	□□□□□ -1.63
LOS1	YKL205W	PES4	P39684	611 aa		4.84	□□□□□ -1.63
LOS1	YKL205W	RPG1	P38249	964 aa	Known RBP	4.84	□□□□□ -1.63
LOS1	YKL205W	GLO3	P38682	493 aa	Known RBP	4.84	□□□□□ -1.64
LOS1	YKL205W	CYB2	P00175	591 aa		4.83	□□□□□ -1.64
LOS1	YKL205W	PIF1	P07271	859 aa		4.83	□□□□□ -1.64
LOS1	YKL205W	YKL222C	P35995	705 aa		4.83	□□□□□ -1.64
LOS1	YKL205W	YBL086C	P38177	466 aa		4.83	□□□□□ -1.64
LOS1	YKL205W	CSI1	Q04368	295 aa		4.83	□□□□□ -1.64
LOS1	YKL205W	ALE1	Q08548	619 aa		4.83	□□□□□ -1.64
LOS1	YKL205W	UGA2	P38067	497 aa		4.82	□□□□□ -1.64
LOS1	YKL205W	ITC1	P53125	1264 aa		4.82	□□□□□ -1.64
LOS1	YKL205W	LPD1	P09624	499 aa	Known RBP	4.82	□□□□□ -1.64
LOS1	YKL205W	RAD24	P32641	659 aa		4.82	□□□□□ -1.64
LOS1	YKL205W	YJL171C	P46992	396 aa		4.82	□□□□□ -1.64
LOS1	YKL205W	GYP5	Q12344	894 aa		4.82	□□□□□ -1.64
LOS1	YKL205W	OPI1	P21957	404 aa		4.82	□□□□□ -1.64
LOS1	YKL205W	FAR11	P53917	953 aa		4.81	□□□□□ -1.64
LOS1	YKL205W	CTT1	P06115	562 aa		4.8	□□□□□ -1.64
LOS1	YKL205W	TRP5	P00931	707 aa	Known RBP	4.8	□□□□□ -1.64
LOS1	YKL205W	TEA1	P47988	759 aa		4.8	□□□□□ -1.64
LOS1	YKL205W	GRX6	Q12438	231 aa		4.8	□□□□□ -1.64
LOS1	YKL205W	KAR5	Q04746	504 aa		4.79	□□□□□ -1.64
LOS1	YKL205W	SUP35	P05453	685 aa	Known RBP	4.79	□□□□□ -1.64
LOS1	YKL205W	EPS1	P40557	701 aa		4.79	□□□□□ -1.64
LOS1	YKL205W	LYS4	P49367	693 aa	Predicted RBP	4.79	□□□□□ -1.64
LOS1	YKL205W	KIN4	Q01919	800 aa		4.79	□□□□□ -1.64
LOS1	YKL205W	ICP55	P40051	511 aa		4.78	□□□□□ -1.64
LOS1	YKL205W	AAD16	Q02895	342 aa		4.78	□□□□□ -1.64
LOS1	YKL205W	PKH3	Q03306	898 aa	Predicted RBP	4.78	□□□□□ -1.64
LOS1	YKL205W	BBC1	P47068	1157 aa		4.78	□□□□□ -1.64
LOS1	YKL205W	TYW1	Q08960	810 aa	Known RBP	4.78	□□□□□ -1.64
LOS1	YKL205W	LSP1	Q12230	341 aa	Known RBP	4.78	□□□□□ -1.64
LOS1	YKL205W	IRC3	Q06683	689 aa		4.77	□□□□□ -1.65
LOS1	YKL205W	SHC1	P39000	512 aa		4.77	□□□□□ -1.65
LOS1	YKL205W	HYR1	P40581	163 aa	Known RBP	4.77	□□□□□ -1.65
LOS1	YKL205W	YGL242C	P53066	181 aa		4.77	□□□□□ -1.65
LOS1	YKL205W	MLC1	P53141	149 aa		4.77	□□□□□ -1.65
LOS1	YKL205W	KTR3	P38130	404 aa	Predicted RBP	4.77	□□□□□ -1.65
LOS1	YKL205W	IOC3	P43596	787 aa		4.76	□□□□□ -1.65
LOS1	YKL205W	YJL181W	P46987	611 aa		4.76	□□□□□ -1.65
LOS1	YKL205W	SNF3	P10870	884 aa		4.76	□□□□□ -1.65
LOS1	YKL205W	ECM21	P38167	1117 aa	Known RBP	4.76	□□□□□ -1.65
LOS1	YKL205W	YNG2	P38806	282 aa	Known RBP	4.76	□□□□□ -1.65
LOS1	YKL205W	HAL5	P38970	855 aa	Known RBP	4.76	□□□□□ -1.65
LOS1	YKL205W	SPO22	P40511	975 aa		4.76	□□□□□ -1.65
LOS1	YKL205W	DPH6	Q12429	685 aa		4.76	□□□□□ -1.65
LOS1	YKL205W	ILV3	P39522	585 aa	Known RBP	4.75	□□□□□ -1.65
LOS1	YKL205W	BRE1	Q07457	700 aa	Known RBP	4.75	□□□□□ -1.65
LOS1	YKL205W	LEU3	P08638	886 aa		4.75	□□□□□ -1.65
LOS1	YKL205W	LCB1	P25045	558 aa	Known RBP	4.75	□□□□□ -1.65
LOS1	YKL205W	KRE2	P27809	442 aa		4.75	□□□□□ -1.65
LOS1	YKL205W	MSH4	P40965	878 aa	Predicted RBP	4.75	□□□□□ -1.65
LOS1	YKL205W	GCR2	Q01722	534 aa		4.75	□□□□□ -1.65
LOS1	YKL205W	BDF2	Q07442	638 aa		4.75	□□□□□ -1.65
LOS1	YKL205W	DIP2	Q12220	943 aa	Predicted RBP	4.75	□□□□□ -1.65
LOS1	YKL205W	APL2	P36000	726 aa	Predicted RBP	4.74	□□□□□ -1.65
LOS1	YKL205W	SPL2	P38839	148 aa		4.74	□□□□□ -1.65
LOS1	YKL205W	YLR278C	Q05854	1341 aa		4.74	□□□□□ -1.65
LOS1	YKL205W	TUS1	Q06412	1307 aa		4.74	□□□□□ -1.65
LOS1	YKL205W	NOT3	P06102	836 aa	Known RBP	4.74	□□□□□ -1.65
LOS1	YKL205W	ASF1	P32447	279 aa		4.74	□□□□□ -1.65
LOS1	YKL205W	FPK1	P53739	893 aa		4.74	□□□□□ -1.65
LOS1	YKL205W	PSH1	Q12161	406 aa		4.74	□□□□□ -1.65
LOS1	YKL205W	LAM4	P38800	1345 aa		4.73	□□□□□ -1.65
LOS1	YKL205W	UTP7	P40055	554 aa	Known RBP	4.73	□□□□□ -1.65
LOS1	YKL205W	ZDS2	P54786	942 aa		4.73	□□□□□ -1.65
LOS1	YKL205W	AIM9	P40053	627 aa	Known RBP	4.72	□□□□□ -1.65
LOS1	YKL205W	WRS1	Q12109	432 aa	Known RBP	4.72	□□□□□ -1.65
LOS1	YKL205W	SEC18	P18759	758 aa	Known RBP	4.72	□□□□□ -1.65
LOS1	YKL205W	SKG3	Q06315	1026 aa		4.72	□□□□□ -1.65
LOS1	YKL205W	TAH18	Q12181	623 aa		4.72	□□□□□ -1.65
LOS1	YKL205W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
LOS1	YKL205W	NOP2	P40991	618 aa	Known RBP	4.72	□□□□□ -1.65
LOS1	YKL205W	SSA1	P10591	642 aa	Known RBP	4.71	□□□□□ -1.66
LOS1	YKL205W	NUP133	P36161	1157 aa		4.71	□□□□□ -1.66
LOS1	YKL205W	OPY1	P38271	328 aa		4.71	□□□□□ -1.66
LOS1	YKL205W	ALO1	P54783	526 aa	Known RBP	4.71	□□□□□ -1.66
LOS1	YKL205W	RIF1	P29539	1916 aa		4.71	□□□□□ -1.66
LOS1	YKL205W	RPL22A	P05749	121 aa	Known RBP	4.71	□□□□□ -1.66
LOS1	YKL205W	KTR1	P27810	393 aa	Known RBP	4.71	□□□□□ -1.66
LOS1	YKL205W	AAP1	P37898	856 aa	Known RBP	4.71	□□□□□ -1.66
LOS1	YKL205W	RFT1	P38206	574 aa	Predicted RBP	4.71	□□□□□ -1.66
LOS1	YKL205W	AIM44	Q99299	758 aa		4.71	□□□□□ -1.66
LOS1	YKL205W	ACK1	Q07622	623 aa	Predicted RBP	4.71	□□□□□ -1.66
LOS1	YKL205W	NKP2	Q06162	153 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms