RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C PDI1P17967 522 aaKnown RBP2.74□□□□□ -1.97
UFD4YKL010C YNL050CP53952 270 aa2.74□□□□□ -1.97
UFD4YKL010C SRC1Q03707 834 aa2.74□□□□□ -1.97
UFD4YKL010C YDL144CQ07589 356 aa2.74□□□□□ -1.97
UFD4YKL010C LEU2P04173 364 aaPredicted RBP2.73□□□□□ -1.97
UFD4YKL010C GAP1P19145 602 aaPredicted RBP2.73□□□□□ -1.97
UFD4YKL010C PCS60P38137 543 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97 RIP-Chip
UFD4YKL010C YDR090CQ03193 310 aa2.73□□□□□ -1.97
UFD4YKL010C CDC73Q06697 393 aa2.73□□□□□ -1.97
UFD4YKL010C CDC16P09798 840 aa2.72□□□□□ -1.97
UFD4YKL010C YMR196WQ04336 1088 aa2.72□□□□□ -1.97
UFD4YKL010C GCD7P32502 381 aaPredicted RBP2.72□□□□□ -1.97
UFD4YKL010C MAM1P40065 302 aa2.72□□□□□ -1.97
UFD4YKL010C RAD54P32863 898 aa2.72□□□□□ -1.97
UFD4YKL010C HIM1Q06674 414 aa2.72□□□□□ -1.97
UFD4YKL010C RPS19AP07280 144 aaKnown RBP2.71□□□□□ -1.98
UFD4YKL010C RPS19BP07281 144 aaPredicted RBP2.71□□□□□ -1.98
UFD4YKL010C VHR2P40041 505 aa2.71□□□□□ -1.98
UFD4YKL010C SAS4Q04003 481 aa2.7□□□□□ -1.98
UFD4YKL010C YDR306CQ06640 478 aa2.7□□□□□ -1.98
UFD4YKL010C RPP1BP10622 106 aaKnown RBP2.7□□□□□ -1.98
UFD4YKL010C RCM1P53972 490 aa2.7□□□□□ -1.98
UFD4YKL010C RTT109Q07794 436 aa2.7□□□□□ -1.98
UFD4YKL010C RAD50P12753 1312 aa2.7□□□□□ -1.98
UFD4YKL010C RSF2P46974 1380 aa2.7□□□□□ -1.98
UFD4YKL010C NTH2P35172 780 aa2.7□□□□□ -1.98
UFD4YKL010C SNF7P39929 240 aaKnown RBP2.7□□□□□ -1.98
UFD4YKL010C YPP1P46951 817 aa2.7□□□□□ -1.98
UFD4YKL010C MPP10P47083 593 aaKnown RBP2.7□□□□□ -1.98
UFD4YKL010C POL32P47110 350 aa2.7□□□□□ -1.98
UFD4YKL010C DSD1P53095 428 aa2.7□□□□□ -1.98
UFD4YKL010C ECM16Q04217 1267 aaKnown RBP2.7□□□□□ -1.98
UFD4YKL010C HYR1P40581 163 aaKnown RBP2.69□□□□□ -1.98
UFD4YKL010C REF2P42073 533 aaPredicted RBP2.69□□□□□ -1.98
UFD4YKL010C RTF1P53064 558 aa2.69□□□□□ -1.98
UFD4YKL010C KRE33P53914 1056 aaKnown RBP2.69□□□□□ -1.98
UFD4YKL010C TFB4Q12004 338 aa2.69□□□□□ -1.98
UFD4YKL010C MAK21Q12176 1025 aaKnown RBP2.69□□□□□ -1.98
UFD4YKL010C RPC31P17890 251 aa2.69□□□□□ -1.98
UFD4YKL010C SDH2P21801 266 aa2.69□□□□□ -1.98
UFD4YKL010C RTR1P40084 226 aaPredicted RBP2.69□□□□□ -1.98
UFD4YKL010C PIL1P53252 339 aaKnown RBP2.68□□□□□ -1.98
UFD4YKL010C CSC1Q06538 782 aa2.68□□□□□ -1.98
UFD4YKL010C PDR1P12383 1068 aa2.68□□□□□ -1.98
UFD4YKL010C RIA1P53893 1110 aa2.68□□□□□ -1.98
UFD4YKL010C AMS1P22855 1083 aa2.68□□□□□ -1.98
UFD4YKL010C ORC6P38826 435 aa2.68□□□□□ -1.98
UFD4YKL010C KAR2P16474 682 aaKnown RBP2.68□□□□□ -1.98
UFD4YKL010C AKL1P38080 1108 aaKnown RBP2.68□□□□□ -1.98
UFD4YKL010C RRT14P40470 206 aa2.68□□□□□ -1.98
UFD4YKL010C MRX12P47084 519 aa2.68□□□□□ -1.98
UFD4YKL010C RAD2P07276 1031 aa2.67□□□□□ -1.98
UFD4YKL010C GYP7P48365 746 aa2.67□□□□□ -1.98
UFD4YKL010C RAS1P01119 309 aa2.67□□□□□ -1.98
UFD4YKL010C AIM44Q99299 758 aa2.67□□□□□ -1.98
UFD4YKL010C PCT1P13259 424 aa2.67□□□□□ -1.98
UFD4YKL010C UGA3P26370 528 aa2.66□□□□□ -1.98
UFD4YKL010C TPD3P31383 635 aa2.66□□□□□ -1.98
UFD4YKL010C SRT1Q03175 343 aa2.66□□□□□ -1.98
UFD4YKL010C ROX1P25042 368 aa2.66□□□□□ -1.98
UFD4YKL010C SLM3Q12093 417 aa2.66□□□□□ -1.98
UFD4YKL010C MYO1P08964 1928 aa2.66□□□□□ -1.98
UFD4YKL010C COX6P00427 148 aa2.66□□□□□ -1.98
UFD4YKL010C ECM23Q02710 187 aa2.66□□□□□ -1.98
UFD4YKL010C BUD20Q08004 166 aaPredicted RBP2.66□□□□□ -1.98
UFD4YKL010C YOL057WQ08225 711 aa2.66□□□□□ -1.98
UFD4YKL010C NOT3P06102 836 aaKnown RBP2.66□□□□□ -1.98
UFD4YKL010C CLC1P17891 233 aa2.66□□□□□ -1.98
UFD4YKL010C BDH2P39713 417 aa2.66□□□□□ -1.98
UFD4YKL010C MPE1P35728 441 aaKnown RBP2.65□□□□□ -1.99
UFD4YKL010C KIC1P38692 1080 aa2.65□□□□□ -1.99
UFD4YKL010C STR2P47164 639 aa2.65□□□□□ -1.99
UFD4YKL010C GYP1Q08484 637 aa2.65□□□□□ -1.99
UFD4YKL010C SAC3P46674 1301 aa2.65□□□□□ -1.99
UFD4YKL010C INP54Q08227 384 aaKnown RBP2.65□□□□□ -1.99
UFD4YKL010C FKS1P38631 1876 aaKnown RBP2.65□□□□□ -1.99
UFD4YKL010C SSK22P25390 1331 aaPredicted RBP2.65□□□□□ -1.99
UFD4YKL010C GCR2Q01722 534 aa2.64□□□□□ -1.99
UFD4YKL010C PRT1P06103 763 aaKnown RBP2.64□□□□□ -1.99
UFD4YKL010C RPS24AP0CX31 135 aaKnown RBP2.64□□□□□ -1.99
UFD4YKL010C RPS24BP0CX32 135 aaKnown RBP2.64□□□□□ -1.99
UFD4YKL010C MSP1P28737 362 aa2.64□□□□□ -1.99
UFD4YKL010C BOI2P39969 1040 aa2.64□□□□□ -1.99
UFD4YKL010C ORC1P54784 914 aaPredicted RBP2.64□□□□□ -1.99
UFD4YKL010C YRR1Q12172 810 aa2.64□□□□□ -1.99
UFD4YKL010C SWI1P09547 1314 aa2.64□□□□□ -1.99
UFD4YKL010C COQ4O13525 335 aa2.64□□□□□ -1.99
UFD4YKL010C GSC2P40989 1895 aa2.64□□□□□ -1.99
UFD4YKL010C MRF1P30775 413 aaPredicted RBP2.64□□□□□ -1.99
UFD4YKL010C ELM1P32801 640 aa2.64□□□□□ -1.99
UFD4YKL010C YEL077CQ3E7X8 1277 aa2.64□□□□□ -1.99
UFD4YKL010C FPR3P38911 411 aaKnown RBP2.63□□□□□ -1.99
UFD4YKL010C ISM1P48526 1002 aa2.63□□□□□ -1.99
UFD4YKL010C ZDS1P50111 915 aaKnown RBP2.63□□□□□ -1.99
UFD4YKL010C AOS1Q06624 347 aa2.63□□□□□ -1.99
UFD4YKL010C TRL1P09880 827 aaKnown RBP2.63□□□□□ -1.99
UFD4YKL010C KCC4P25389 1037 aa2.63□□□□□ -1.99
UFD4YKL010C NUD1P32336 851 aa2.63□□□□□ -1.99
UFD4YKL010C MVP1P40959 511 aaKnown RBP2.63□□□□□ -1.99
UFD4YKL010C PEX21P50091 288 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 86.4 ms