RNA–Protein interactions for RNA: YJR049C

UTR1, Transcript of ATP-NADH kinase, yeast

Gene UTR1, Length 1,593 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTR1	YJR049C	SSF1	P38789	453 aa	Predicted RBP	11.71	□□□□□ -0.54
UTR1	YJR049C	ITC1	P53125	1264 aa		11.71	□□□□□ -0.54
UTR1	YJR049C	FCP1	Q03254	732 aa		11.71	□□□□□ -0.54
UTR1	YJR049C	UTP10	P42945	1769 aa	Known RBP	11.71	□□□□□ -0.54
UTR1	YJR049C	ECM21	P38167	1117 aa	Known RBP	11.7	□□□□□ -0.54
UTR1	YJR049C	TEA1	P47988	759 aa		11.7	□□□□□ -0.54
UTR1	YJR049C	HXT17	P53631	564 aa		11.7	□□□□□ -0.54
UTR1	YJR049C	NOT3	P06102	836 aa	Known RBP	11.69	□□□□□ -0.54
UTR1	YJR049C	YGL082W	P53155	381 aa		11.69	□□□□□ -0.54
UTR1	YJR049C	PSH1	Q12161	406 aa		11.69	□□□□□ -0.54
UTR1	YJR049C	DUR1,2	P32528	1835 aa	Known RBP	11.68	□□□□□ -0.54
UTR1	YJR049C	RPN11	P43588	306 aa	Known RBP	11.68	□□□□□ -0.54
UTR1	YJR049C	RMD1	Q03441	430 aa		11.68	□□□□□ -0.54
UTR1	YJR049C	PDR18	P53756	1333 aa		11.68	□□□□□ -0.54
UTR1	YJR049C	PRP40	P33203	583 aa	Known RBP	11.67	□□□□□ -0.54
UTR1	YJR049C	SER1	P33330	395 aa	Known RBP	11.67	□□□□□ -0.54
UTR1	YJR049C	VPS24	P36095	224 aa	Known RBP	11.67	□□□□□ -0.54
UTR1	YJR049C	KTR3	P38130	404 aa	Predicted RBP	11.67	□□□□□ -0.54
UTR1	YJR049C	DJP1	P40564	432 aa		11.67	□□□□□ -0.54
UTR1	YJR049C	SLA1	P32790	1244 aa		11.66	□□□□□ -0.54
UTR1	YJR049C	SNF7	P39929	240 aa	Known RBP	11.66	□□□□□ -0.54
UTR1	YJR049C	YGL242C	P53066	181 aa		11.66	□□□□□ -0.54
UTR1	YJR049C	MTC5	Q03897	1148 aa		11.66	□□□□□ -0.54
UTR1	YJR049C	MSB4	Q12317	492 aa		11.66	□□□□□ -0.54
UTR1	YJR049C	SRS2	P12954	1174 aa		11.65	□□□□□ -0.54
UTR1	YJR049C	CLC1	P17891	233 aa		11.65	□□□□□ -0.54
UTR1	YJR049C	MLC1	P53141	149 aa		11.65	□□□□□ -0.54
UTR1	YJR049C	ALO1	P54783	526 aa	Known RBP	11.65	□□□□□ -0.54
UTR1	YJR049C	GRE2	Q12068	342 aa	Known RBP	11.65	□□□□□ -0.54
UTR1	YJR049C	LSP1	Q12230	341 aa	Known RBP	11.65	□□□□□ -0.54
UTR1	YJR049C	NYV1	Q12255	253 aa		11.65	□□□□□ -0.54
UTR1	YJR049C	YJL181W	P46987	611 aa		11.64	□□□□□ -0.55
UTR1	YJR049C	MRPS35	P53292	345 aa		11.64	□□□□□ -0.55
UTR1	YJR049C	NPR2	P39923	615 aa		11.63	□□□□□ -0.55
UTR1	YJR049C	BRE1	Q07457	700 aa	Known RBP	11.63	□□□□□ -0.55
UTR1	YJR049C	RIM20	Q12033	661 aa		11.63	□□□□□ -0.55
UTR1	YJR049C	ROX1	P25042	368 aa		11.62	□□□□□ -0.55
UTR1	YJR049C	SUP35	P05453	685 aa	Known RBP	11.62	□□□□□ -0.55
UTR1	YJR049C	AAP1	P37898	856 aa	Known RBP	11.62	□□□□□ -0.55
UTR1	YJR049C	TRL1	P09880	827 aa	Known RBP	11.61	□□□□□ -0.55
UTR1	YJR049C	FPR4	Q06205	392 aa	Predicted RBP	11.61	□□□□□ -0.55
UTR1	YJR049C	GYP5	Q12344	894 aa		11.61	□□□□□ -0.55
UTR1	YJR049C	UBP16	Q02863	499 aa		11.6	□□□□□ -0.55
UTR1	YJR049C	AI2	P03876	854 aa		11.59	□□□□□ -0.55
UTR1	YJR049C	RNR2	P09938	399 aa	Known RBP	11.59	□□□□□ -0.55
UTR1	YJR049C	SNU66	Q12420	587 aa	Predicted RBP	11.59	□□□□□ -0.55
UTR1	YJR049C	SSK22	P25390	1331 aa	Predicted RBP	11.59	□□□□□ -0.55
UTR1	YJR049C	SAC3	P46674	1301 aa		11.59	□□□□□ -0.55
UTR1	YJR049C	MSP1	P28737	362 aa		11.58	□□□□□ -0.55
UTR1	YJR049C	PIB2	P53191	635 aa		11.58	□□□□□ -0.55
UTR1	YJR049C	SEC18	P18759	758 aa	Known RBP	11.58	□□□□□ -0.56
UTR1	YJR049C	KTR1	P27810	393 aa	Known RBP	11.58	□□□□□ -0.56
UTR1	YJR049C	YMR074C	Q04773	145 aa		11.58	□□□□□ -0.56
UTR1	YJR049C	NPA3	P47122	385 aa		11.57	□□□□□ -0.56
UTR1	YJR049C	VPS20	Q04272	221 aa		11.56	□□□□□ -0.56
UTR1	YJR049C	HAT1	Q12341	374 aa		11.56	□□□□□ -0.56
UTR1	YJR049C	EPS1	P40557	701 aa		11.55	□□□□□ -0.56
UTR1	YJR049C	RPN7	Q06103	429 aa	Known RBP	11.55	□□□□□ -0.56
UTR1	YJR049C	YNL193W	P53870	558 aa		11.54	□□□□□ -0.56
UTR1	YJR049C	ADR1	P07248	1323 aa		11.53	□□□□□ -0.56
UTR1	YJR049C	STM1	P39015	273 aa	Known RBP	11.53	□□□□□ -0.56
UTR1	YJR049C	AIM9	P40053	627 aa	Known RBP	11.53	□□□□□ -0.56
UTR1	YJR049C	BUG1	Q12191	341 aa		11.53	□□□□□ -0.56
UTR1	YJR049C	KRI1	P42846	591 aa	Known RBP	11.52	□□□□□ -0.57
UTR1	YJR049C	SLN1	P39928	1220 aa	Predicted RBP	11.51	□□□□□ -0.57
UTR1	YJR049C	LYS4	P49367	693 aa	Predicted RBP	11.51	□□□□□ -0.57
UTR1	YJR049C	UBP1	P25037	809 aa		11.5	□□□□□ -0.57
UTR1	YJR049C	PBY1	P38254	753 aa		11.5	□□□□□ -0.57
UTR1	YJR049C	RAT1	Q02792	1006 aa	Known RBP	11.5	□□□□□ -0.57
UTR1	YJR049C	CTI6	Q08923	506 aa		11.5	□□□□□ -0.57
UTR1	YJR049C	GLN1	P32288	370 aa	Known RBP	11.5	□□□□□ -0.57
UTR1	YJR049C	ARL1	P38116	183 aa	Known RBP	11.5	□□□□□ -0.57
UTR1	YJR049C	BUD31	P25337	157 aa	Predicted RBP	11.49	□□□□□ -0.57
UTR1	YJR049C	BDH2	P39713	417 aa		11.49	□□□□□ -0.57
UTR1	YJR049C	CWH41	P53008	833 aa		11.49	□□□□□ -0.57
UTR1	YJR049C	HAP5	Q02516	242 aa		11.49	□□□□□ -0.57
UTR1	YJR049C	OSH3	P38713	996 aa	Known RBP	11.48	□□□□□ -0.57
UTR1	YJR049C	YGL081W	P53156	320 aa		11.48	□□□□□ -0.57
UTR1	YJR049C	UTP22	P53254	1237 aa	Predicted RBP	11.48	□□□□□ -0.57
UTR1	YJR049C	HRQ1	Q05549	1077 aa		11.48	□□□□□ -0.57
UTR1	YJR049C	POM152	P39685	1337 aa		11.47	□□□□□ -0.57
UTR1	YJR049C	RRI2	Q12348	645 aa		11.47	□□□□□ -0.57
UTR1	YJR049C	BIK1	P11709	440 aa		11.46	□□□□□ -0.57
UTR1	YJR049C	NGR1	P32831	672 aa	Known RBP	11.46	□□□□□ -0.57
UTR1	YJR049C	BDF1	P35817	686 aa		11.46	□□□□□ -0.57
UTR1	YJR049C	HAL5	P38970	855 aa	Known RBP	11.46	□□□□□ -0.57
UTR1	YJR049C	TPM1	P17536	199 aa	Known RBP	11.45	□□□□□ -0.58
UTR1	YJR049C	OPI1	P21957	404 aa		11.45	□□□□□ -0.58
UTR1	YJR049C	SPO22	P40511	975 aa		11.45	□□□□□ -0.58
UTR1	YJR049C	HST1	P53685	503 aa		11.45	□□□□□ -0.58
UTR1	YJR049C	YMR147W	P40218	223 aa	Known RBP	11.45	□□□□□ -0.58
UTR1	YJR049C	CTH1	P47976	325 aa		11.45	□□□□□ -0.58
UTR1	YJR049C	COG8	Q04632	607 aa		11.45	□□□□□ -0.58
UTR1	YJR049C	THI3	Q07471	609 aa		11.45	□□□□□ -0.58
UTR1	YJR049C	PGA3	Q12746	312 aa	Known RBP	11.45	□□□□□ -0.58
UTR1	YJR049C	RPL19A	P0CX82	189 aa	Known RBP	11.44	□□□□□ -0.58
UTR1	YJR049C	RPL19B	P0CX83	189 aa	Predicted RBP	11.44	□□□□□ -0.58
UTR1	YJR049C	KNS1	P32350	737 aa	Predicted RBP	11.44	□□□□□ -0.58
UTR1	YJR049C	RPG1	P38249	964 aa	Known RBP	11.44	□□□□□ -0.58
UTR1	YJR049C	GLO3	P38682	493 aa	Known RBP	11.44	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 156.1 ms