RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W TEA1P47988 759 aa7.5□□□□□ -1.21
GEF1YJR040W ITC1P53125 1264 aa7.5□□□□□ -1.21
GEF1YJR040W YJR008WP47085 338 aa7.5□□□□□ -1.21
GEF1YJR040W YDR306CQ06640 478 aa7.5□□□□□ -1.21
GEF1YJR040W GRE2Q12068 342 aaKnown RBP7.5□□□□□ -1.21
GEF1YJR040W YBR287WP38355 427 aa7.49□□□□□ -1.21
GEF1YJR040W SMC3P47037 1230 aa7.49□□□□□ -1.21
GEF1YJR040W BUG1Q12191 341 aa7.49□□□□□ -1.21
GEF1YJR040W CST6P40535 587 aa7.49□□□□□ -1.21
GEF1YJR040W ALD2P47771 506 aa7.49□□□□□ -1.21
GEF1YJR040W UTP22P53254 1237 aaPredicted RBP7.49□□□□□ -1.21
GEF1YJR040W LSP1Q12230 341 aaKnown RBP7.49□□□□□ -1.21
GEF1YJR040W RPS19AP07280 144 aaKnown RBP7.48□□□□□ -1.21
GEF1YJR040W RPS19BP07281 144 aaPredicted RBP7.48□□□□□ -1.21
GEF1YJR040W MRP7P12687 371 aa7.48□□□□□ -1.21
GEF1YJR040W TUM1Q08686 304 aaKnown RBP7.48□□□□□ -1.21
GEF1YJR040W HGH1P48362 394 aaKnown RBP7.47□□□□□ -1.21
GEF1YJR040W NKP2Q06162 153 aa7.47□□□□□ -1.21
GEF1YJR040W NOP8Q08287 484 aaPredicted RBP7.47□□□□□ -1.21
GEF1YJR040W SRS2P12954 1174 aa7.47□□□□□ -1.21
GEF1YJR040W UTP10P42945 1769 aaKnown RBP7.47□□□□□ -1.21
GEF1YJR040W YGL081WP53156 320 aa7.46□□□□□ -1.21
GEF1YJR040W YLR271WQ06152 274 aa7.46□□□□□ -1.21
GEF1YJR040W RFC1P38630 861 aaKnown RBP7.46□□□□□ -1.22
GEF1YJR040W RIX1P38883 763 aaPredicted RBP7.46□□□□□ -1.22
GEF1YJR040W SPO1P53541 631 aa7.46□□□□□ -1.22
GEF1YJR040W ALD3P54114 506 aa7.46□□□□□ -1.22
GEF1YJR040W SSK22P25390 1331 aaPredicted RBP7.46□□□□□ -1.22
GEF1YJR040W DLD1P32891 587 aa7.45□□□□□ -1.22
GEF1YJR040W SWE1P32944 819 aa7.45□□□□□ -1.22
GEF1YJR040W UGA2P38067 497 aa7.45□□□□□ -1.22
GEF1YJR040W YNG2P38806 282 aaKnown RBP7.45□□□□□ -1.22
GEF1YJR040W SWI1P09547 1314 aa7.45□□□□□ -1.22
GEF1YJR040W CLB5P30283 435 aa7.45□□□□□ -1.22
GEF1YJR040W NYV1Q12255 253 aa7.45□□□□□ -1.22
GEF1YJR040W SPC110P32380 944 aa7.44□□□□□ -1.22
GEF1YJR040W NMD2P38798 1089 aaKnown RBP7.44□□□□□ -1.22
GEF1YJR040W SET1P38827 1080 aaKnown RBP7.44□□□□□ -1.22
GEF1YJR040W TPM2P40414 161 aa7.44□□□□□ -1.22
GEF1YJR040W LYS4P49367 693 aaPredicted RBP7.44□□□□□ -1.22
GEF1YJR040W CSI1Q04368 295 aa7.44□□□□□ -1.22
GEF1YJR040W RAD50P12753 1312 aa7.44□□□□□ -1.22
GEF1YJR040W DEF1P35732 738 aaKnown RBP7.44□□□□□ -1.22
GEF1YJR040W ECM16Q04217 1267 aaKnown RBP7.44□□□□□ -1.22
GEF1YJR040W YPR204WQ08995 1032 aa7.44□□□□□ -1.22
GEF1YJR040W SSA2P10592 639 aaKnown RBP7.43□□□□□ -1.22
GEF1YJR040W BRN1P38170 754 aa7.43□□□□□ -1.22
GEF1YJR040W YBL086CP38177 466 aa7.43□□□□□ -1.22
GEF1YJR040W ARG8P18544 423 aa7.43□□□□□ -1.22
GEF1YJR040W BOI2P39969 1040 aa7.43□□□□□ -1.22
GEF1YJR040W CTH1P47976 325 aa7.43□□□□□ -1.22
GEF1YJR040W RSC1P53236 928 aa7.43□□□□□ -1.22
GEF1YJR040W LCD1Q04377 747 aa7.43□□□□□ -1.22
GEF1YJR040W DIB1Q06819 143 aaPredicted RBP7.43□□□□□ -1.22
GEF1YJR040W NUP133P36161 1157 aa7.42□□□□□ -1.22
GEF1YJR040W RPG1P38249 964 aaKnown RBP7.42□□□□□ -1.22
GEF1YJR040W COG8Q04632 607 aa7.42□□□□□ -1.22
GEF1YJR040W RAD24P32641 659 aa7.41□□□□□ -1.22
GEF1YJR040W RPN1P38764 993 aaKnown RBP7.41□□□□□ -1.22
GEF1YJR040W ZDS2P54786 942 aa7.41□□□□□ -1.22
GEF1YJR040W GCR2Q01722 534 aa7.41□□□□□ -1.22
GEF1YJR040W RAT1Q02792 1006 aaKnown RBP7.41□□□□□ -1.22
GEF1YJR040W VPS64Q03944 604 aa7.41□□□□□ -1.22
GEF1YJR040W SUP35P05453 685 aaKnown RBP7.4□□□□□ -1.22
GEF1YJR040W GCD7P32502 381 aaPredicted RBP7.4□□□□□ -1.22
GEF1YJR040W SER1P33330 395 aaKnown RBP7.4□□□□□ -1.22
GEF1YJR040W HXT13P39924 564 aa7.4□□□□□ -1.22
GEF1YJR040W MTC5Q03897 1148 aa7.4□□□□□ -1.22
GEF1YJR040W SAC3P46674 1301 aa7.4□□□□□ -1.23
GEF1YJR040W MCM2P29469 868 aa7.4□□□□□ -1.23
GEF1YJR040W TOS1P38288 455 aa7.4□□□□□ -1.23
GEF1YJR040W NPA3P47122 385 aa7.4□□□□□ -1.23
GEF1YJR040W APL2P36000 726 aaPredicted RBP7.39□□□□□ -1.23
GEF1YJR040W KRI1P42846 591 aaKnown RBP7.39□□□□□ -1.23
GEF1YJR040W HXT17P53631 564 aa7.39□□□□□ -1.23
GEF1YJR040W PKH1Q03407 766 aa7.39□□□□□ -1.23
GEF1YJR040W HAT1Q12341 374 aa7.39□□□□□ -1.23
GEF1YJR040W LPD1P09624 499 aaKnown RBP7.39□□□□□ -1.23
GEF1YJR040W SSF1P38789 453 aaPredicted RBP7.39□□□□□ -1.23
GEF1YJR040W YGL082WP53155 381 aa7.39□□□□□ -1.23
GEF1YJR040W YGR122WP53272 402 aa7.39□□□□□ -1.23
GEF1YJR040W VPS20Q04272 221 aa7.39□□□□□ -1.23
GEF1YJR040W ESC2Q06340 456 aa7.39□□□□□ -1.23
GEF1YJR040W UBP12P39538 1254 aa7.38□□□□□ -1.23
GEF1YJR040W HAP5Q02516 242 aa7.38□□□□□ -1.23
GEF1YJR040W DCD1P06773 312 aa7.38□□□□□ -1.23
GEF1YJR040W RKM3P38222 552 aa7.38□□□□□ -1.23
GEF1YJR040W DSN1P40568 576 aa7.38□□□□□ -1.23
GEF1YJR040W HOS3Q02959 697 aaKnown RBP7.37□□□□□ -1.23
GEF1YJR040W LTV1P34078 463 aa7.36□□□□□ -1.23
GEF1YJR040W MED8P38304 223 aa7.36□□□□□ -1.23
GEF1YJR040W CIN4P39110 191 aa7.36□□□□□ -1.23
GEF1YJR040W BDP1P46678 594 aa7.36□□□□□ -1.23
GEF1YJR040W HPC2Q01448 625 aa7.36□□□□□ -1.23
GEF1YJR040W VAS1P07806 1104 aaKnown RBP7.35□□□□□ -1.23
GEF1YJR040W TCD1P38756 429 aa7.35□□□□□ -1.23
GEF1YJR040W ECM1P39715 212 aa7.35□□□□□ -1.23
GEF1YJR040W PIL1P53252 339 aaKnown RBP7.35□□□□□ -1.23
GEF1YJR040W PSH1Q12161 406 aa7.35□□□□□ -1.23
GEF1YJR040W SPB4P25808 606 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 110.5 ms