RNA–Protein interactions for RNA: YJL124C

LSM1, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM1, Length 519 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM1	YJL124C	YPR084W	Q06821	456 aa		4.28	□□□□□ -1.72
LSM1	YJL124C	BRE1	Q07457	700 aa	Known RBP	4.28	□□□□□ -1.72
LSM1	YJL124C	YOL098C	Q12496	1037 aa		4.28	□□□□□ -1.72
LSM1	YJL124C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
LSM1	YJL124C	SEC20	P28791	383 aa		4.27	□□□□□ -1.73
LSM1	YJL124C	YBL086C	P38177	466 aa		4.27	□□□□□ -1.73
LSM1	YJL124C	RPT2	P40327	437 aa	Known RBP	4.27	□□□□□ -1.73
LSM1	YJL124C	EMW1	P42842	904 aa	Known RBP	4.27	□□□□□ -1.73
LSM1	YJL124C	YPR204W	Q08995	1032 aa		4.27	□□□□□ -1.73
LSM1	YJL124C	SSB1	P11484	613 aa	Known RBP	4.26	□□□□□ -1.73
LSM1	YJL124C	TEC1	P18412	486 aa		4.26	□□□□□ -1.73
LSM1	YJL124C	SSB2	P40150	613 aa	Known RBP	4.26	□□□□□ -1.73
LSM1	YJL124C	AIM21	P40563	679 aa		4.26	□□□□□ -1.73
LSM1	YJL124C	GAL11	P19659	1081 aa		4.25	□□□□□ -1.73
LSM1	YJL124C	RTT106	P40161	455 aa		4.25	□□□□□ -1.73
LSM1	YJL124C	NUP85	P46673	744 aa		4.25	□□□□□ -1.73
LSM1	YJL124C	YDL176W	Q12027	708 aa		4.25	□□□□□ -1.73
LSM1	YJL124C	SRF1	Q12516	437 aa		4.25	□□□□□ -1.73
LSM1	YJL124C	RTG2	P32608	588 aa	Known RBP	4.24	□□□□□ -1.73
LSM1	YJL124C	RPS0A	P32905	252 aa	Known RBP	4.24	□□□□□ -1.73
LSM1	YJL124C	ISW1	P38144	1129 aa		4.24	□□□□□ -1.73
LSM1	YJL124C	CWC22	P53333	577 aa	Known RBP	4.24	□□□□□ -1.73
LSM1	YJL124C	NAF1	P53919	492 aa	Known RBP	4.24	□□□□□ -1.73
LSM1	YJL124C	RRP15	Q06511	250 aa	Predicted RBP	4.24	□□□□□ -1.73
LSM1	YJL124C	OPT2	Q06593	877 aa		4.24	□□□□□ -1.73
LSM1	YJL124C	RAD2	P07276	1031 aa		4.23	□□□□□ -1.73
LSM1	YJL124C	CSE4	P36012	229 aa		4.23	□□□□□ -1.73
LSM1	YJL124C	ERP2	P39704	215 aa		4.23	□□□□□ -1.73
LSM1	YJL124C	BOI2	P39969	1040 aa		4.23	□□□□□ -1.73
LSM1	YJL124C	AAD14	P42884	376 aa		4.23	□□□□□ -1.73
LSM1	YJL124C	GIR2	Q03768	265 aa	Predicted RBP	4.23	□□□□□ -1.73
LSM1	YJL124C	YML083C	Q04526	418 aa		4.23	□□□□□ -1.73
LSM1	YJL124C	TMA64	Q04600	565 aa	Known RBP	4.23	□□□□□ -1.73
LSM1	YJL124C	YDL121C	Q07541	149 aa		4.23	□□□□□ -1.73
LSM1	YJL124C	YOL057W	Q08225	711 aa		4.23	□□□□□ -1.73
LSM1	YJL124C	RPA135	P22138	1203 aa	Known RBP	4.22	□□□□□ -1.73
LSM1	YJL124C	VMA4	P22203	233 aa	Known RBP	4.22	□□□□□ -1.73
LSM1	YJL124C	PUP1	P25043	261 aa		4.22	□□□□□ -1.73
LSM1	YJL124C	GUT2	P32191	649 aa		4.22	□□□□□ -1.73
LSM1	YJL124C	MKS1	P34072	584 aa		4.22	□□□□□ -1.73
LSM1	YJL124C	YBL036C	P38197	257 aa		4.22	□□□□□ -1.73
LSM1	YJL124C	NOC2	P39744	710 aa	Known RBP	4.22	□□□□□ -1.73
LSM1	YJL124C	POL32	P47110	350 aa		4.22	□□□□□ -1.73
LSM1	YJL124C	DFG5	Q05031	458 aa		4.22	□□□□□ -1.73
LSM1	YJL124C	MSC6	Q08818	692 aa	Known RBP	4.22	□□□□□ -1.73
LSM1	YJL124C	YBL113C	Q7M4S9	792 aa		4.22	□□□□□ -1.73
LSM1	YJL124C	ARG82	P07250	355 aa		4.21	□□□□□ -1.74
LSM1	YJL124C	ATE1	P16639	503 aa		4.21	□□□□□ -1.74
LSM1	YJL124C	BIO2	P32451	375 aa		4.21	□□□□□ -1.74
LSM1	YJL124C	SRP40	P32583	406 aa	Predicted RBP	4.21	□□□□□ -1.74
LSM1	YJL124C	MFT1	P33441	392 aa	Known RBP	4.21	□□□□□ -1.74
LSM1	YJL124C	MPE1	P35728	441 aa	Known RBP	4.21	□□□□□ -1.74
LSM1	YJL124C	VPS27	P40343	622 aa	Known RBP	4.21	□□□□□ -1.74
LSM1	YJL124C	ALG12	P53730	551 aa		4.21	□□□□□ -1.74
LSM1	YJL124C	ECM16	Q04217	1267 aa	Known RBP	4.21	□□□□□ -1.74
LSM1	YJL124C	POB3	Q04636	552 aa	Known RBP	4.21	□□□□□ -1.74
LSM1	YJL124C	YLR346C	Q06139	101 aa		4.21	□□□□□ -1.74
LSM1	YJL124C	JIP5	Q06214	492 aa	Predicted RBP	4.21	□□□□□ -1.74
LSM1	YJL124C	FRA1	Q07825	749 aa		4.21	□□□□□ -1.74
LSM1	YJL124C	KAR1	P11927	433 aa		4.2	□□□□□ -1.74
LSM1	YJL124C	YDJ1	P25491	409 aa	Known RBP	4.2	□□□□□ -1.74
LSM1	YJL124C	DLD1	P32891	587 aa		4.2	□□□□□ -1.74
LSM1	YJL124C	EBP2	P36049	427 aa	Known RBP	4.2	□□□□□ -1.74
LSM1	YJL124C	GLY1	P37303	387 aa	Known RBP	4.2	□□□□□ -1.74
LSM1	YJL124C	ACO2	P39533	789 aa		4.2	□□□□□ -1.74
LSM1	YJL124C	STE20	Q03497	939 aa	Known RBP	4.2	□□□□□ -1.74
LSM1	YJL124C	MAG2	Q06436	670 aa	Known RBP	4.2	□□□□□ -1.74
LSM1	YJL124C	RLP24	Q07915	199 aa	Known RBP	4.2	□□□□□ -1.74
LSM1	YJL124C	CIT2	P08679	460 aa		4.19	□□□□□ -1.74
LSM1	YJL124C	STE6	P12866	1290 aa		4.19	□□□□□ -1.74
LSM1	YJL124C	ISF1	P32488	338 aa		4.19	□□□□□ -1.74
LSM1	YJL124C	FBP26	P32604	452 aa		4.19	□□□□□ -1.74
LSM1	YJL124C	GRX4	P32642	244 aa		4.19	□□□□□ -1.74
LSM1	YJL124C	SEC8	P32855	1065 aa		4.19	□□□□□ -1.74
LSM1	YJL124C	YKL091C	P33324	310 aa	Known RBP	4.19	□□□□□ -1.74
LSM1	YJL124C	MPP10	P47083	593 aa	Known RBP	4.19	□□□□□ -1.74
LSM1	YJL124C	YJR098C	P47139	656 aa		4.19	□□□□□ -1.74
LSM1	YJL124C	YGL081W	P53156	320 aa		4.19	□□□□□ -1.74
LSM1	YJL124C	LSC2	P53312	427 aa		4.19	□□□□□ -1.74
LSM1	YJL124C	CAF120	P53836	1060 aa		4.19	□□□□□ -1.74
LSM1	YJL124C	OYE2	Q03558	400 aa	Known RBP	4.19	□□□□□ -1.74
LSM1	YJL124C	CEF1	Q03654	590 aa	Predicted RBP	4.19	□□□□□ -1.74
LSM1	YJL124C	MCM16	Q12262	181 aa		4.19	□□□□□ -1.74
LSM1	YJL124C	MIP1	P15801	1254 aa		4.18	□□□□□ -1.74
LSM1	YJL124C	SPT5	P27692	1063 aa	Known RBP	4.18	□□□□□ -1.74
LSM1	YJL124C	ERP5	P38819	212 aa		4.18	□□□□□ -1.74
LSM1	YJL124C	POL5	P39985	1022 aa	Known RBP	4.18	□□□□□ -1.74
LSM1	YJL124C	EMP47	P43555	445 aa		4.18	□□□□□ -1.74
LSM1	YJL124C	ATG20	Q07528	640 aa		4.18	□□□□□ -1.74
LSM1	YJL124C	BDS1	Q08347	646 aa		4.18	□□□□□ -1.74
LSM1	YJL124C	TY1A-BL	Q12266	440 aa		4.18	□□□□□ -1.74
LSM1	YJL124C	YHL050C	P38721	697 aa		4.17	□□□□□ -1.74
LSM1	YJL124C	YHR219W	P38900	624 aa		4.17	□□□□□ -1.74
LSM1	YJL124C	IES1	P43579	692 aa		4.17	□□□□□ -1.74
LSM1	YJL124C	APL6	P46682	809 aa		4.17	□□□□□ -1.74
LSM1	YJL124C	SCW11	P53189	542 aa		4.17	□□□□□ -1.74
LSM1	YJL124C	YNL108C	P53929	270 aa		4.17	□□□□□ -1.74
LSM1	YJL124C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
LSM1	YJL124C	ISU1	Q03020	165 aa		4.17	□□□□□ -1.74
LSM1	YJL124C	TCB1	Q12466	1186 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms