RNA–Protein interactions for RNA: YJL094C

KHA1, Transcript of Putative K+/H+ antiporter, yeast

Gene KHA1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KHA1	YJL094C	YPR015C	Q12531	247 aa		4.17	□□□□□ -1.74
KHA1	YJL094C	LSO1	Q3E827	93 aa		4.17	□□□□□ -1.74
KHA1	YJL094C	FKH1	P40466	484 aa		4.16	□□□□□ -1.74
KHA1	YJL094C	KXD1	P53158	218 aa		4.16	□□□□□ -1.74
KHA1	YJL094C	ALD3	P54114	506 aa		4.16	□□□□□ -1.74
KHA1	YJL094C	ELP4	Q02884	456 aa	Known RBP	4.16	□□□□□ -1.74
KHA1	YJL094C	ALD6	P54115	500 aa	Known RBP	4.16	□□□□□ -1.74
KHA1	YJL094C	RPB10	P22139	70 aa		4.15	□□□□□ -1.74
KHA1	YJL094C	RPT1	P33299	467 aa	Known RBP	4.15	□□□□□ -1.74
KHA1	YJL094C	TRS120	Q04183	1289 aa		4.15	□□□□□ -1.75
KHA1	YJL094C	YOL098C	Q12496	1037 aa		4.15	□□□□□ -1.75
KHA1	YJL094C	PHO4	P07270	312 aa	Known RBP	4.14	□□□□□ -1.75
KHA1	YJL094C	FOX2	Q02207	900 aa	Known RBP	4.14	□□□□□ -1.75
KHA1	YJL094C	FPR4	Q06205	392 aa	Predicted RBP	4.14	□□□□□ -1.75
KHA1	YJL094C	CYT1	P07143	309 aa		4.14	□□□□□ -1.75
KHA1	YJL094C	RPS6A	P0CX37	236 aa	Known RBP	4.14	□□□□□ -1.75
KHA1	YJL094C	RPS6B	P0CX38	236 aa	Predicted RBP	4.14	□□□□□ -1.75
KHA1	YJL094C	ISC10	P32645	267 aa		4.14	□□□□□ -1.75
KHA1	YJL094C	YBR197C	P38306	217 aa		4.14	□□□□□ -1.75
KHA1	YJL094C	RRD1	P40454	393 aa	Known RBP	4.14	□□□□□ -1.75
KHA1	YJL094C	ATG20	Q07528	640 aa		4.14	□□□□□ -1.75
KHA1	YJL094C	UBP1	P25037	809 aa		4.13	□□□□□ -1.75
KHA1	YJL094C	DAK2	P43550	591 aa		4.13	□□□□□ -1.75
KHA1	YJL094C	YFL034W	P43564	1073 aa		4.13	□□□□□ -1.75
KHA1	YJL094C	ARH1	P48360	493 aa		4.13	□□□□□ -1.75
KHA1	YJL094C	RNH70	P53331	553 aa		4.13	□□□□□ -1.75
KHA1	YJL094C	PRT1	P06103	763 aa	Known RBP	4.13	□□□□□ -1.75
KHA1	YJL094C	IOC3	P43596	787 aa		4.13	□□□□□ -1.75
KHA1	YJL094C	DOS2	P54858	310 aa		4.13	□□□□□ -1.75
KHA1	YJL094C	CAB1	Q04430	367 aa		4.13	□□□□□ -1.75
KHA1	YJL094C	SWI5	P08153	709 aa		4.12	□□□□□ -1.75
KHA1	YJL094C	NGR1	P32831	672 aa	Known RBP	4.12	□□□□□ -1.75
KHA1	YJL094C	KTR2	P33550	425 aa		4.12	□□□□□ -1.75
KHA1	YJL094C	FAR11	P53917	953 aa		4.12	□□□□□ -1.75
KHA1	YJL094C	APP1	P53933	587 aa		4.12	□□□□□ -1.75
KHA1	YJL094C	AIR2	Q12476	344 aa	Known RBP	4.12	□□□□□ -1.75
KHA1	YJL094C	YAF9	P53930	226 aa		4.12	□□□□□ -1.75
KHA1	YJL094C	VPS16	Q03308	798 aa		4.12	□□□□□ -1.75
KHA1	YJL094C	TOS4	Q06266	489 aa		4.12	□□□□□ -1.75
KHA1	YJL094C	RPS26A	P39938	119 aa	Known RBP	4.11	□□□□□ -1.75
KHA1	YJL094C	RPS26B	P39939	119 aa	Known RBP	4.11	□□□□□ -1.75
KHA1	YJL094C	CWH41	P53008	833 aa		4.11	□□□□□ -1.75
KHA1	YJL094C	MOD5	P07884	428 aa		4.11	□□□□□ -1.75
KHA1	YJL094C	SPR3	P41901	512 aa		4.11	□□□□□ -1.75
KHA1	YJL094C	BNI4	P53858	892 aa		4.11	□□□□□ -1.75
KHA1	YJL094C	TPD3	P31383	635 aa		4.1	□□□□□ -1.75
KHA1	YJL094C	PEP7	P32609	515 aa		4.1	□□□□□ -1.75
KHA1	YJL094C	NMD2	P38798	1089 aa	Known RBP	4.1	□□□□□ -1.75
KHA1	YJL094C	MAD1	P40957	749 aa		4.1	□□□□□ -1.75
KHA1	YJL094C	APC11	Q12157	165 aa		4.1	□□□□□ -1.75
KHA1	YJL094C	SRP40	P32583	406 aa	Predicted RBP	4.1	□□□□□ -1.75
KHA1	YJL094C	SUT1	P53032	299 aa	Known RBP	4.1	□□□□□ -1.75
KHA1	YJL094C	MTO1	P53070	669 aa		4.1	□□□□□ -1.75
KHA1	YJL094C	CIT2	P08679	460 aa		4.09	□□□□□ -1.75
KHA1	YJL094C	BDS1	Q08347	646 aa		4.09	□□□□□ -1.75
KHA1	YJL094C	PIN2	Q12057	282 aa		4.09	□□□□□ -1.75
KHA1	YJL094C	PAT1	P25644	796 aa	Known RBP	4.09	□□□□□ -1.75
KHA1	YJL094C	SPT16	P32558	1035 aa	Known RBP	4.09	□□□□□ -1.75
KHA1	YJL094C	PPG1	P32838	368 aa		4.09	□□□□□ -1.75
KHA1	YJL094C	YKL091C	P33324	310 aa	Known RBP	4.09	□□□□□ -1.75
KHA1	YJL094C	SSF2	Q12153	453 aa	Predicted RBP	4.09	□□□□□ -1.75
KHA1	YJL094C	UTR2	P32623	467 aa		4.08	□□□□□ -1.76
KHA1	YJL094C	PTC2	P39966	464 aa	Known RBP	4.08	□□□□□ -1.76
KHA1	YJL094C	PUS5	Q06244	254 aa		4.08	□□□□□ -1.76
KHA1	YJL094C	SPT23	P35210	1082 aa		4.08	□□□□□ -1.76
KHA1	YJL094C	KIP2	P28743	706 aa		4.07	□□□□□ -1.76
KHA1	YJL094C	HXT5	P38695	592 aa		4.07	□□□□□ -1.76
KHA1	YJL094C	UFD2	P54860	961 aa		4.07	□□□□□ -1.76
KHA1	YJL094C	ISU1	Q03020	165 aa		4.07	□□□□□ -1.76
KHA1	YJL094C	EMW1	P42842	904 aa	Known RBP	4.07	□□□□□ -1.76
KHA1	YJL094C	SPT2	P06843	333 aa	Predicted RBP	4.06	□□□□□ -1.76
KHA1	YJL094C	DAT1	P13483	248 aa	Known RBP	4.06	□□□□□ -1.76
KHA1	YJL094C	CYC8	P14922	966 aa		4.06	□□□□□ -1.76
KHA1	YJL094C	FAA3	P39002	694 aa		4.06	□□□□□ -1.76
KHA1	YJL094C	ALG12	P53730	551 aa		4.06	□□□□□ -1.76
KHA1	YJL094C	NSE3	Q05541	303 aa		4.06	□□□□□ -1.76
KHA1	YJL094C	GCD6	P32501	712 aa	Known RBP	4.06	□□□□□ -1.76
KHA1	YJL094C	YNL011C	P53980	444 aa		4.06	□□□□□ -1.76
KHA1	YJL094C	WRS1	Q12109	432 aa	Known RBP	4.06	□□□□□ -1.76
KHA1	YJL094C	MRPL33	P20084	86 aa		4.05	□□□□□ -1.76
KHA1	YJL094C	ATG36	P46983	293 aa		4.05	□□□□□ -1.76
KHA1	YJL094C	CDC55	Q00362	526 aa		4.05	□□□□□ -1.76
KHA1	YJL094C	BMT6	Q12291	365 aa		4.05	□□□□□ -1.76
KHA1	YJL094C	CLN2	P20438	545 aa		4.05	□□□□□ -1.76
KHA1	YJL094C	FBP26	P32604	452 aa		4.05	□□□□□ -1.76
KHA1	YJL094C	PET112	P33893	541 aa		4.05	□□□□□ -1.76
KHA1	YJL094C	PRE3	P38624	215 aa		4.05	□□□□□ -1.76
KHA1	YJL094C	UTP7	P40055	554 aa	Known RBP	4.05	□□□□□ -1.76
KHA1	YJL094C	YGR122W	P53272	402 aa		4.05	□□□□□ -1.76
KHA1	YJL094C	CWC24	P53769	259 aa		4.05	□□□□□ -1.76
KHA1	YJL094C	CDC53	Q12018	815 aa	Known RBP	4.05	□□□□□ -1.76
KHA1	YJL094C	VPS35	P34110	944 aa		4.04	□□□□□ -1.76
KHA1	YJL094C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
KHA1	YJL094C	ESF1	Q06344	628 aa	Known RBP	4.04	□□□□□ -1.76
KHA1	YJL094C	RAD2	P07276	1031 aa		4.04	□□□□□ -1.76
KHA1	YJL094C	MKS1	P34072	584 aa		4.04	□□□□□ -1.76
KHA1	YJL094C	RMD1	Q03441	430 aa		4.04	□□□□□ -1.76
KHA1	YJL094C	YPQ2	Q06328	317 aa		4.04	□□□□□ -1.76
KHA1	YJL094C	WTM2	Q12206	467 aa		4.04	□□□□□ -1.76
KHA1	YJL094C	HXK1	P04806	485 aa	Known RBP	4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms