RNA–Protein interactions for RNA: YIR039C

YPS6, Transcript of Putative GPI-anchored aspartic protease, yeast

Gene YPS6, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS6	YIR039C	SSK2	P53599	1579 aa		4.85	□□□□□ -1.63
YPS6	YIR039C	ECM5	Q03214	1411 aa		4.84	□□□□□ -1.63
YPS6	YIR039C	STE20	Q03497	939 aa	Known RBP	4.84	□□□□□ -1.63
YPS6	YIR039C	DFG5	Q05031	458 aa		4.84	□□□□□ -1.63
YPS6	YIR039C	ENO2	P00925	437 aa	Known RBP	4.83	□□□□□ -1.64
YPS6	YIR039C	GUT2	P32191	649 aa		4.83	□□□□□ -1.64
YPS6	YIR039C	CDC3	P32457	520 aa	Known RBP	4.83	□□□□□ -1.64
YPS6	YIR039C	RPL34A	P87262	121 aa	Predicted RBP	4.83	□□□□□ -1.64
YPS6	YIR039C	BUD4	P47136	1447 aa		4.83	□□□□□ -1.64
YPS6	YIR039C	CDC19	P00549	500 aa	Known RBP	4.83	□□□□□ -1.64
YPS6	YIR039C	ENO1	P00924	437 aa	Known RBP	4.83	□□□□□ -1.64
YPS6	YIR039C	PUP1	P25043	261 aa		4.83	□□□□□ -1.64
YPS6	YIR039C	ISF1	P32488	338 aa		4.83	□□□□□ -1.64
YPS6	YIR039C	SIS2	P36024	562 aa		4.83	□□□□□ -1.64
YPS6	YIR039C	EMP47	P43555	445 aa		4.83	□□□□□ -1.64
YPS6	YIR039C	MRX12	P47084	519 aa		4.83	□□□□□ -1.64
YPS6	YIR039C	NAM8	Q00539	523 aa	Known RBP	4.83	□□□□□ -1.64
YPS6	YIR039C	MRX10	Q05648	414 aa		4.83	□□□□□ -1.64
YPS6	YIR039C	MCM16	Q12262	181 aa		4.83	□□□□□ -1.64
YPS6	YIR039C	ESP1	Q03018	1630 aa		4.82	□□□□□ -1.64
YPS6	YIR039C	YPP1	P46951	817 aa		4.82	□□□□□ -1.64
YPS6	YIR039C	RIM21	P48565	533 aa		4.82	□□□□□ -1.64
YPS6	YIR039C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
YPS6	YIR039C	YML083C	Q04526	418 aa		4.82	□□□□□ -1.64
YPS6	YIR039C	SKI3	P17883	1432 aa	Known RBP	4.82	□□□□□ -1.64
YPS6	YIR039C	SSF1	P38789	453 aa	Predicted RBP	4.81	□□□□□ -1.64
YPS6	YIR039C	BDS1	Q08347	646 aa		4.81	□□□□□ -1.64
YPS6	YIR039C	THI72	Q08579	599 aa		4.81	□□□□□ -1.64
YPS6	YIR039C	SLD2	P34252	453 aa		4.8	□□□□□ -1.64
YPS6	YIR039C	AI1	P03875	834 aa		4.79	□□□□□ -1.64
YPS6	YIR039C	FBP26	P32604	452 aa		4.79	□□□□□ -1.64
YPS6	YIR039C	FRA1	Q07825	749 aa		4.79	□□□□□ -1.64
YPS6	YIR039C	ATG2	P53855	1592 aa		4.79	□□□□□ -1.64
YPS6	YIR039C	YFL066C	P43538	392 aa		4.79	□□□□□ -1.64
YPS6	YIR039C	VTC4	P47075	721 aa		4.79	□□□□□ -1.64
YPS6	YIR039C	YPR084W	Q06821	456 aa		4.79	□□□□□ -1.64
YPS6	YIR039C	TGL4	P36165	910 aa		4.78	□□□□□ -1.64
YPS6	YIR039C	CCT8	P47079	568 aa	Known RBP	4.78	□□□□□ -1.64
YPS6	YIR039C	CUZ1	P53899	274 aa		4.78	□□□□□ -1.64
YPS6	YIR039C	MYO2	P19524	1574 aa	Known RBP	4.78	□□□□□ -1.64
YPS6	YIR039C	STE6	P12866	1290 aa		4.77	□□□□□ -1.65
YPS6	YIR039C	PEP12	P32854	288 aa		4.77	□□□□□ -1.65
YPS6	YIR039C	ATG3	P40344	310 aa		4.77	□□□□□ -1.65
YPS6	YIR039C	ORC1	P54784	914 aa	Predicted RBP	4.77	□□□□□ -1.65
YPS6	YIR039C	SEN54	Q02825	467 aa	Predicted RBP	4.77	□□□□□ -1.65
YPS6	YIR039C	RDS2	P19541	446 aa	Known RBP	4.75	□□□□□ -1.65
YPS6	YIR039C	CEM1	P39525	442 aa		4.75	□□□□□ -1.65
YPS6	YIR039C	ATG20	Q07528	640 aa		4.75	□□□□□ -1.65
YPS6	YIR039C	HAT1	Q12341	374 aa		4.75	□□□□□ -1.65
YPS6	YIR039C	YPR053C	Q6Q5F3	151 aa		4.75	□□□□□ -1.65
YPS6	YIR039C	MDS3	P53094	1487 aa		4.74	□□□□□ -1.65
YPS6	YIR039C	DAL1	P32375	460 aa		4.74	□□□□□ -1.65
YPS6	YIR039C	SOH1	P38633	127 aa		4.74	□□□□□ -1.65
YPS6	YIR039C	AIM44	Q99299	758 aa		4.74	□□□□□ -1.65
YPS6	YIR039C	PEP1	P32319	1579 aa		4.74	□□□□□ -1.65
YPS6	YIR039C	HEM3	P28789	327 aa		4.73	□□□□□ -1.65
YPS6	YIR039C	SNU71	P53207	620 aa	Known RBP	4.73	□□□□□ -1.65
YPS6	YIR039C	NOP7	P53261	605 aa	Known RBP	4.73	□□□□□ -1.65
YPS6	YIR039C	ISR1	Q06098	443 aa	Known RBP	4.73	□□□□□ -1.65
YPS6	YIR039C	STU1	P38198	1513 aa		4.73	□□□□□ -1.65
YPS6	YIR039C	SBP1	P10080	294 aa	Known RBP	4.72	□□□□□ -1.65
YPS6	YIR039C	KTR7	P40504	517 aa		4.72	□□□□□ -1.65
YPS6	YIR039C	YPK9	Q12697	1472 aa		4.71	□□□□□ -1.65
YPS6	YIR039C	APL6	P46682	809 aa		4.71	□□□□□ -1.66
YPS6	YIR039C	ADE12	P80210	433 aa	Known RBP	4.71	□□□□□ -1.66
YPS6	YIR039C	ECM23	Q02710	187 aa		4.71	□□□□□ -1.66
YPS6	YIR039C	ISU1	Q03020	165 aa		4.71	□□□□□ -1.66
YPS6	YIR039C	UTP13	Q05946	817 aa	Known RBP	4.71	□□□□□ -1.66
YPS6	YIR039C	POL1	P13382	1468 aa		4.71	□□□□□ -1.66
YPS6	YIR039C	GAL2	P13181	574 aa		4.7	□□□□□ -1.66
YPS6	YIR039C	DLD3	P39976	496 aa	Known RBP	4.7	□□□□□ -1.66
YPS6	YIR039C	SYT1	Q06836	1226 aa		4.7	□□□□□ -1.66
YPS6	YIR039C	SCC2	Q04002	1493 aa		4.69	□□□□□ -1.66
YPS6	YIR039C	RPP2B	P02400	110 aa	Known RBP	4.69	□□□□□ -1.66
YPS6	YIR039C	DAT1	P13483	248 aa	Known RBP	4.69	□□□□□ -1.66
YPS6	YIR039C	DIT1	P21623	536 aa		4.69	□□□□□ -1.66
YPS6	YIR039C	RRN6	P32786	894 aa		4.69	□□□□□ -1.66
YPS6	YIR039C	PAM1	P37304	830 aa	Known RBP	4.69	□□□□□ -1.66
YPS6	YIR039C	SKN7	P38889	622 aa		4.69	□□□□□ -1.66
YPS6	YIR039C	STM1	P39015	273 aa	Known RBP	4.69	□□□□□ -1.66
YPS6	YIR039C	YMR265C	Q03508	461 aa	Known RBP	4.69	□□□□□ -1.66
YPS6	YIR039C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
YPS6	YIR039C	MMS22	Q06164	1454 aa		4.69	□□□□□ -1.66
YPS6	YIR039C	HAL5	P38970	855 aa	Known RBP	4.68	□□□□□ -1.66
YPS6	YIR039C	SBE2	P42223	864 aa	Known RBP	4.68	□□□□□ -1.66
YPS6	YIR039C	UBP15	P50101	1230 aa		4.68	□□□□□ -1.66
YPS6	YIR039C	TDA6	Q06466	467 aa		4.68	□□□□□ -1.66
YPS6	YIR039C	BPT1	P14772	1559 aa		4.68	□□□□□ -1.66
YPS6	YIR039C	RKR1	Q04781	1562 aa		4.68	□□□□□ -1.66
YPS6	YIR039C	UBX7	P38349	436 aa		4.68	□□□□□ -1.66
YPS6	YIR039C	YMR187C	Q03236	431 aa		4.68	□□□□□ -1.66
YPS6	YIR039C	HDA3	Q06623	655 aa		4.68	□□□□□ -1.66
YPS6	YIR039C	YBL113C	Q7M4S9	792 aa		4.68	□□□□□ -1.66
YPS6	YIR039C	UFD4	P33202	1483 aa		4.67	□□□□□ -1.66
YPS6	YIR039C	UTR2	P32623	467 aa		4.67	□□□□□ -1.66
YPS6	YIR039C	TBS1	P38114	1094 aa		4.67	□□□□□ -1.66
YPS6	YIR039C	ERP5	P38819	212 aa		4.67	□□□□□ -1.66
YPS6	YIR039C	IPL1	P38991	367 aa		4.67	□□□□□ -1.66
YPS6	YIR039C	PDI1	P17967	522 aa	Known RBP	4.66	□□□□□ -1.66
YPS6	YIR039C	SEC20	P28791	383 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms